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Dynamic mechanical measurement of the viscoelasticity of single adherent cells

Corbin, E. A., Adeniba, O. O., Ewoldt, R. H. & Bashir, R., Feb 29 2016, In : Applied Physics Letters. 108, 9, 093701.

Research output: Contribution to journalArticle

mechanical measurement
viscoelasticity
cells
sensors
microelectromechanical systems

Effect of biointerfacing linker chemistries on the sensitivity of silicon nanowires for protein detection

Dorvel, B., Reddy, B. & Bashir, R., Oct 15 2013, In : Analytical chemistry. 85, 20, p. 9493-9500 8 p.

Research output: Contribution to journalArticle

Silicon
Nanowires
Proteins
Oxides
Antigens

Electrical cell counting process characterization in a microfluidic impedance cytometer

Hassan, U. & Bashir, R., Jan 1 2014, In : Biomedical microdevices. 16, 5, p. 697-704 8 p.

Research output: Contribution to journalArticle

Microfluidics
Electric Impedance
Dilution
Blood
Lab-On-A-Chip Devices

Electrical Chips for Biological Point-of-Care Detection

Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Biochips
Lab-on-a-chip
Multiplexing
Health care

Electrical detection of dsDNA and polymerase chain reaction amplification

Salm, E., Liu, Y. S., Marchwiany, D., Morisette, D., He, Y., Bhunia, A. K. & Bashir, R., Dec 2011, In : Biomedical microdevices. 13, 6, p. 973-982 10 p.

Research output: Contribution to journalArticle

Polymerase chain reaction
Amplification
DNA
Polymerase Chain Reaction
Deionized water

Electrical detection of nucleic acid amplification using an on-chip quasi-reference electrode and a PVC REFET

Salm, E., Zhong, Y., Reddy, B., Duarte-Guevara, C., Swaminathan, V., Liu, Y. S. & Bashir, R., Jul 15 2014, In : Analytical chemistry. 86, 14, p. 6968-6975 8 p.

Research output: Contribution to journalArticle

Field effect transistors
Polyvinyl Chloride
Nucleic Acids
Ion sensitive field effect transistors
Amplification

Electrical flow metering of blood for point-of-care diagnostics

Watkins, N., Hassan, U., Rodriguez, W. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 3255-3257 3 p. 6346659. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Point-of-Care Systems
Blood
Microfluidics
Microelectrodes
Leukocyte Count

Electrochemistry at the edge of a single graphene layer in a nanopore

Banerjee, S., Shim, J., Rivera, J., Jin, X., Estrada, D., Solovyeva, V., You, X., Pak, J., Pop, E., Aluru, N. & Bashir, R., Jan 22 2013, In : ACS Nano. 7, 1, p. 834-843 10 p.

Research output: Contribution to journalArticle

Nanopores
Graphite
Electrochemistry
electrochemistry
Graphene

Electron beam induced local crystallization of HfO2 nanopores for biosensing applications

Shim, J., Rivera, J. A. & Bashir, R., Nov 21 2013, In : Nanoscale. 5, 22, p. 10887-10893 7 p.

Research output: Contribution to journalArticle

Nanopores
Crystallization
Electron beams
Graphite
Membranes

Electronic desalting for controlling the ionic environment in droplet-based biosensing platforms

Swaminathan, V. V., Dak, P., Reddy, B., Salm, E., Duarte-Guevara, C., Zhong, Y., Fischer, A., Liu, Y. S., Alam, M. A. & Bashir, R., Feb 2 2015, In : Applied Physics Letters. 106, 5, 053105.

Research output: Contribution to journalArticle

platforms
salts
electronics
platinum black
electrodes

Enabling microscale and nanoscale approaches for bioengineered cardiac tissue

Chan, V., Raman, R., Cvetkovic, C. & Bashir, R., Mar 26 2013, In : ACS Nano. 7, 3, p. 1830-1837 8 p.

Research output: Contribution to journalArticle

microbalances
Tissue
Carbon Nanotubes
Methacrylates
gelatins

Engineering as a new frontier for translational medicine

Chien, S., Bashir, R., Nerem, R. M. & Pettigrew, R., Apr 1 2015, In : Science Translational Medicine. 7, 281, 281fs13.

Research output: Contribution to journalArticle

Translational Medical Research
Medicine
Delivery of Health Care
Therapeutics

Engineering geometrical 3-dimensional untethered in vitro neural tissue mimic

Pagan-Diaz, G. J., Ramos-Cruz, K. P., Sam, R., Kandel, M. E., Aydin, O., Saif, T. M. A., Popescu, G. & Bashir, R., Dec 17 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 51, p. 25932-25940 9 p.

Research output: Contribution to journalArticle

Biomedical Research
Therapeutic Human Experimentation
Robotics
Drug Discovery
Embryonic Stem Cells

Enhanced biosensing resolution with foundry fabricated individually addressable dual-gated ISFETs

Duarte-Guevara, C., Lai, F. L., Cheng, C. W., Reddy, B., Salm, E., Swaminathan, V., Tsui, Y. K., Tuan, H. C., Kalnitsky, A., Liu, Y. S. & Bashir, R., Aug 19 2014, In : Analytical chemistry. 86, 16, p. 8359-8367 9 p.

Research output: Contribution to journalArticle

Ion sensitive field effect transistors
Foundries
Transistors
Silicon
Semiconductor materials

Enhanced sub-micron colloidal particle separation with interdigitated microelectrode arrays using mixed AC/DC dielectrophoretic scheme

Swaminathan, V. V., Shannon, M. A. & Bashir, R., Jan 1 2015, In : Biomedical microdevices. 17, 2

Research output: Contribution to journalArticle

Microelectrodes
Electrodes
DNA Viruses
Colloids
Static Electricity

Erratum: Electrical detection of dsDNA and polymerase chain reaction amplification (Biomedical Microdevices DOI: 10.1007/s10544-011-9567-x)

Salm, E., Liu, Y. S., Marchwiany, D., Morisette, D., He, Y., Razouk, L., Bhunia, A. K. & Bashir, R., Dec 1 2011, In : Biomedical microdevices. 13, 6, 1 p.

Research output: Contribution to journalComment/debate

Polymerase chain reaction
Amplification
Polymerase Chain Reaction

Evidence of differential mass change rates between human breast cancer cell lines in culture

Corbin, E. A., Adeniba, O. O., Cangellaris, O. V., King, W. P. & Bashir, R., Mar 1 2017, In : Biomedical microdevices. 19, 1, 10.

Research output: Contribution to journalArticle

Cell culture
Cells
Breast Neoplasms
Cell Line
Growth

Examining cellular interactions in 3-dimensional microenvironments

Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials, ESB 2011.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fabrication and characterization of optogenetic, multi-strip cardiac muscles

Chan, V., Neal, D. M., Uzel, S. G. M., Kim, H., Bashir, R. & Asada, H. H., May 21 2015, In : Lab on a chip. 15, 10, p. 2258-2268 11 p.

Research output: Contribution to journalArticle

Optogenetics
Muscle
Myocardium
Fabrication
Tissue engineering

Fabrication of silicon nanoplate and nanowire biosensor arrays with high specificity and sub-picomolar limits of detection

Dorvel, B., Reddy, B., Bergstrom, D., Alam, M. A., Clare, S. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1871-1873 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Field effect transistors
Biosensors
Nanowires
Fabrication
Silicon

Flow metering characterization within an electrical cell counting microfluidic device

Hassan, U., Watkins, N. N., Edwards, C. & Bashir, R., Apr 21 2014, In : Lab on a Chip. 14, 8, p. 1469-1476 8 p.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Microfluidics
Blood
Fluids
Flow of fluids

Fluidic measurement of electric field sensitivity of Ti-GaAs Schottky junction gated field effect biosensors

Chang, W. J., Suk, H. J., Newaz, A. K. M., Wallace, K. D., Wickline, S. A., Solin, S. A. & Bashir, R., Oct 1 2010, In : Biomedical microdevices. 12, 5, p. 849-854 6 p.

Research output: Contribution to journalArticle

Fluidics
Biosensing Techniques
Biosensors
Semiconductors
Metals

Glacier moraine formation-mimicking colloidal particle assembly in microchanneled, bioactive hydrogel for guided vascular network construction

Lee, M. K., Rich, M. H., Shkumatov, A., Jeong, J. H., Boppart, M. D., Bashir, R., Gillette, M. U., Lee, J. & Kong, H., Jan 1 2015, In : Advanced Healthcare Materials. 4, 2, p. 195-201 7 p.

Research output: Contribution to journalArticle

Ice Cover
Glaciers
Hydrogel
Microchannels
Hydrogels

Graphene-Based Patterning and Differentiation of C2C12 Myoblasts

Bajaj, P., Rivera, J. A., Marchwiany, D., Solovyeva, V. & Bashir, R., Jul 2014, In : Advanced Healthcare Materials. 3, 7, p. 995-1000 6 p.

Research output: Contribution to journalArticle

Mice (computer peripherals)
Bioengineering
Graphite
Myoblasts
Skeletal Muscle Fibers

Graphene-Based Platform for Infrared Near-Field Nanospectroscopy of Water and Biological Materials in an Aqueous Environment

Khatib, O., Wood, J. D., McLeod, A. S., Goldflam, M. D., Wagner, M., Damhorst, G. L., Koepke, J. C., Doidge, G. P., Rangarajan, A., Bashir, R., Pop, E., Lyding, J. W., Thiemens, M. H., Keilmann, F. & Basov, D. N., Aug 25 2015, In : ACS Nano. 9, 8, p. 7968-7975 8 p.

Research output: Contribution to journalArticle

Graphite
Biological materials
Graphene
near fields
graphene

Graphene nanopores for nucleic acid analysis

Shim, J., Solovyeva, V., Estrada, D., Banerjee, S., Rivera, J., Pop, E. & Bashir, R., 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322237

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanopores
Graphite
Nucleic acids
nucleic acids
Graphene

Hands-free smartphone-based diagnostics for simultaneous detection of Zika, Chikungunya, and Dengue at point-of-care

Ganguli, A., Ornob, A., Yu, H., Damhorst, G. L., Chen, W., Sun, F., Bhuiya, A., Cunningham, B. T. & Bashir, R., Dec 1 2017, In : Biomedical microdevices. 19, 4, 73.

Research output: Contribution to journalArticle

Point-of-Care Systems
Dengue
Smartphones
Blood
Hand

High-k dielectric Al2O3 nanowire and nanoplate field effect sensors for improved pH sensing

Reddy, B., Dorvel, B. R., Go, J., Nair, P. R., Elibol, O. H., Credo, G. M., Daniels, J. S., Chow, E. K. C., Su, X., Varma, M., Alam, M. A. & Bashir, R., Apr 1 2011, In : Biomedical microdevices. 13, 2, p. 335-344 10 p.

Research output: Contribution to journalArticle

Nanowires
Gate dielectrics
Field effect transistors
Equipment and Supplies
Sensors

High-Resolution Projection Microstereolithography for Patterning of Neovasculature

Raman, R., Bhaduri, B., Mir, M., Shkumatov, A., Lee, M. K., Popescu, G., Kong, H. & Bashir, R., Mar 9 2016, In : Advanced Healthcare Materials. 5, 5, p. 610-619 10 p.

Research output: Contribution to journalArticle

Stereolithography
Tissue engineering
Assays
Tissue
Fabrication

HIV-1 IIIB capture from whole blood on magnetic microparticles

Damhorst, G. L., Kooiman, J. M. & Bashir, R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., p. 5785-5788 4 p. 7592042. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2016-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Antibodies
HIV-1
Blood
HIV
Proteins

How far cardiac cells can see each other mechanically

Tang, X., Bajaj, P., Bashir, R. & Saif, T. A., Jul 7 2011, In : Soft Matter. 7, 13, p. 6151-6158 8 p.

Research output: Contribution to journalArticle

Substrates
cells
Stiffness
Continuum mechanics
Tissue

Hydrodynamic loading and viscous damping of patterned perforations on microfabricated resonant structures

Park, K., Shim, J., Solovyeva, V., Corbin, E., Banerjee, S. & Bashir, R., Apr 9 2012, In : Applied Physics Letters. 100, 15, 154107.

Research output: Contribution to journalArticle

viscous damping
perforation
damping
hydrodynamics
penetration

Impedance microbiology and microbial screening strategy for detecting pathogens in food

Flint, S., Naila, A. & Bashir, R., Sep 4 2014, High Throughput Screening for Food Safety Assessment: Biosensor Technologies, Hyperspectral Imaging and Practical Applications. Elsevier Inc., p. 285-300 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Microbiology
impedance
Pathogens
food pathogens
microbiology

Improved graphene growth and fluorination on Cu with clean transfer to surfaces

Wood, J. D., Schmucker, S. W., Haasch, R. T., Doidge, G. P., Nienhaus, L., Damhorst, G. L., Lyons, A. S., Gruebele, M., Bashir, R., Pop, E. & Lyding, J. W., Nov 22 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322101. (Proceedings of the IEEE Conference on Nanotechnology).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorination
fluorination
Graphite
Graphene
graphene

Independent control stiffness and permeability of a cell-encapsulating hydrogel; integration of bio-inspired material chemistry and microfabrication

Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Bashir, R. & Kong, H., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

permeability
Hydrogel
Microfabrication
Hydrogels
chemistry

In situ self-folding assembly of a multi-walled hydrogel tube for uniaxial sustained molecular release

Baek, K., Jeong, J. H., Shkumatov, A., Bashir, R. & Kong, H., Oct 18 2013, In : Advanced Materials. 25, 39, p. 5568-5573 6 p.

Research output: Contribution to journalArticle

Hydrogel
Hydrogels
Gels
Vascular Endothelial Growth Factor A
Polyethylene glycols

Integrated cantilever-based biosensors for the detection of chemical and biological entities

Corbin, E. A., YekrangSafakar, A., Adeniba, O., Gupta, A., Park, K. & Bashir, R., Jan 1 2017, Nanotechnology in Biology and Medicine: Methods, Devices, and Applications, Second Edition. CRC Press, p. 469-529 61 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Biosensing Techniques
Biosensors
Sensors
Vacuum
Air

Integrated 'lab-on-a-transistor': With droplets-in-air for parallel nanoliter reactions

Salm, E., Duarte, C., Jokilaakso, N. & Bashir, R., Jan 1 2012, Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012. Chemical and Biological Microsystems Society, p. 1945-1947 3 p. (Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transistors
Air
Heating
Thermal cycling
Sensors

Integrated lab on chip for detection of cells and micro-organisms

Salm, E., Duarte, C. & Bashir, R., Dec 1 2012, 2012 IEEE Photonics Conference, IPC 2012. p. 145-146 2 p. 6358531. (2012 IEEE Photonics Conference, IPC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transistors
Field effect transistors
Lab-on-a-chip
Hybrid sensors
Heating

Inverse-extraordianry optoconductance in Ti/Au/GaAs hybrid structures

Newaz, A. K. M., Chang, W. J., Wallace, K. D., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F., Edge, L. C. & Solin, S. A., Dec 1 2011, Physics of Semiconductors - 30th International Conference on the Physics of Semiconductors, ICPS-30. p. 973-974 2 p. (AIP Conference Proceedings; vol. 1399).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

hybrid structures
metals
luminous intensity
photons

Investigating the Life Expectancy and Proteolytic Degradation of Engineered Skeletal Muscle Biological Machines

Cvetkovic, C., Ferrall-Fairbanks, M. C., Ko, E., Grant, L., Kong, H., Platt, M. O. & Bashir, R., Dec 1 2017, In : Scientific reports. 7, 1, 3775.

Research output: Contribution to journalArticle

Life Expectancy
Skeletal Muscle
Peptide Hydrolases
Tissue Engineering
Matrix Metalloproteinases

Label-free electrical detection of pyrophosphate generated from DNA polymerase reactions on field-effect devices

Credo, G. M., Su, X., Wu, K., Elibol, O. H., Liu, D. J., Reddy, B., Tsai, T. W., Dorvel, B. R., Daniels, J. S., Bashir, R. & Varma, M., Mar 21 2012, In : Analyst. 137, 6, p. 1351-1362 12 p.

Research output: Contribution to journalArticle

Labels
DNA
Chelating Agents
sensor
Equipment and Supplies

Label-free imaging of cell attachment with photonic crystal enhanced microscopy

Lidstone, E. A., Chaudhery, V., Kohl, A., Chan, V., Wolf-Jensen, T., Schook, L. B., Bashir, R. & Cunningham, B. T., Sep 21 2011, In : Analyst. 136, 18, p. 3608-3615 8 p.

Research output: Contribution to journalArticle

Optics and Photonics
Photonic crystals
Labels
microscopy
Microscopy

Label-free intracellular transport measured by spatial light interference microscopy

Wang, Z., Millet, L., Chan, V., Ding, H., Gillette, M. U., Bashir, R. & Popescu, G., Feb 1 2011, In : Journal of biomedical optics. 16, 2, 026019.

Research output: Contribution to journalArticle

Light interference
organelles
Labels
Microscopic examination
microscopy

Lipid bilayer coated Al2O3 nanopore sensors: Towards a hybrid biological solid-state nanopore

Venkatesan, B. M., Polans, J., Comer, J., Sridhar, S., Wendell, D., Aksimentiev, A. & Bashir, R., Aug 1 2011, In : Biomedical microdevices. 13, 4, p. 671-682 12 p.

Research output: Contribution to journalArticle

Nanopores
Lipid bilayers
Lipid Bilayers
Sensors
Ion Channels

"Living" microvascular stamp for patterning of functional neovessels; Orchestrated control of matrix property and geometry

Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Dyck, C., Hsia, K. J., Bashir, R. & Kong, H., Jan 3 2012, In : Advanced Materials. 24, 1, p. 58-63 6 p.

Research output: Contribution to journalArticle

Angiogenesis Inducing Agents
Hydrogels
Geometry
Hydrogel

Localized Dielectric Loss Heating in Dielectrophoresis Devices

Kwak, T. J., Hossen, I., Bashir, R., Chang, W. J. & Lee, C. H., Dec 1 2019, In : Scientific reports. 9, 1, 18977.

Research output: Contribution to journalArticle

Open Access
Heating
Equipment and Supplies
Temperature
Electrodes
Hot Temperature

Localized heating on silicon field effect transistors for bio-chemical reactions

Reddy, B., Elibol, O. H., Nair, P. R., Dorvel, B. R., Bergstrom, D., Alam, M. A. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1163-1165 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Field effect transistors
Chemical reactions
Transistors
Heating
Silicon

Long-Term Cryopreservation and Revival of Tissue-Engineered Skeletal Muscle

Grant, L., Raman, R., Cvetkovic, C., Ferrall-Fairbanks, M. C., Pagan-Diaz, G. J., Hadley, P., Ko, E., Platt, M. O. & Bashir, R., Jul 1 2019, In : Tissue Engineering - Part A. 25, 13-14, p. 1023-1036 14 p.

Research output: Contribution to journalArticle

Cryopreservation
Muscle
Skeletal Muscle
Tissue
Freezing

Magnetophoretic-based microfluidic device for DNA Concentration

Shim, S., Shim, J., Taylor, W. R., Kosari, F., Vasmatzis, G., Ahlquist, D. A. & Bashir, R., Apr 1 2016, In : Biomedical microdevices. 18, 2, p. 1-8 8 p., 28.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Microfluidics
DNA
Nanofluidics
Nucleic acids