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Research Output

2020

Characterization of genes involved in (p)ppGpp precursor biosynthesis in Erwinia amylovora

Yang, H. W., Yu, M., Liu, J., Khan, A. & Zhao, Y., 2020, (Accepted/In press) In : Journal of Plant Pathology.

Research output: Contribution to journalArticle

Comparative transcriptomic analysis of global gene expression mediated by (p) ppGpp reveals common regulatory networks in Pseudomonas syringae

Liu, J., Yu, M., Chatnaparat, T., Lee, J. H., Tian, Y., Hu, B. & Zhao, Y., Apr 10 2020, In : BMC genomics. 21, 1, 296.

Research output: Contribution to journalArticle

Open Access

Host-induced gene silencing of multiple genes of Fusarium graminearum enhances resistance to Fusarium head blight in wheat

Wang, M., Wu, L., Mei, Y., Zhao, Y., Ma, Z., Zhang, X. & Chen, Y., 2020, (Accepted/In press) In : Plant Biotechnology Journal.

Research output: Contribution to journalArticle

Open Access

Lysobacter enzymogenes employs diverse genes for inhibiting hypha growth and spore germination of soybean fungal pathogens

Yu, M., Zhang, G., Jiang, J., Du, L. & Zhao, Y., Jan 1 2020, In : Phytopathology. 110, 3, p. 593-602 10 p.

Research output: Contribution to journalArticle

The RasGEF FgCdc25 regulates fungal development and virulence in Fusarium graminearum via cAMP and MAPK signalling pathways

Chen, A., Ju, Z., Wang, J., Wang, J., Wang, H., Wu, J., Yin, Y., Zhao, Y., Ma, Z. & Chen, Y., 2020, (Accepted/In press) In : Environmental Microbiology.

Research output: Contribution to journalArticle

The stringent response regulator (p) ppGpp mediates virulence gene expression and survival in Erwinia amylovora

Yang, H. W., Yu, M., Lee, J. H., Chatnaparat, T. & Zhao, Y., Mar 30 2020, In : BMC genomics. 21, 1, 261.

Research output: Contribution to journalArticle

Open Access
2019

Comparative resistomic analyses of Lysobacter species with high intrinsic multidrug resistance

Yu, M. & Zhao, Y., Dec 2019, In : Journal of Global Antimicrobial Resistance. 19, p. 320-327 8 p.

Research output: Contribution to journalArticle

Fire blight disease, a fast-approaching threat to apple and pear production in China

ZHAO, Y. Q., TIAN, Y. L., WANG, L. M., GENG, G. M., ZHAO, W. J., HU, B. S. & ZHAO, Y. F., Apr 2019, In : Journal of Integrative Agriculture. 18, 4, p. 815-820 6 p.

Research output: Contribution to journalReview article

Open Access

Homologues of the RNA binding protein RsmA in Pseudomonas syringae pv. tomato DC3000 exhibit distinct binding affinities with non-coding small RNAs and have distinct roles in virulence

Ge, Y., Lee, J. H., Liu, J., Yang, H. W., Tian, Y., Hu, B. & Zhao, Y., 2019, In : Molecular Plant Pathology. 20, 9, p. 1217-1236 20 p.

Research output: Contribution to journalArticle

Open Access

Many plant pathogenic Pseudomonas savastanoi pv glycinea isolates possess an inactive quorum sensing ahlR gene via a point mutation

Degrassi, G., Mortato, V., Devescovi, G., Hoshino, R., Chatnaparat, T., Kojic, M., Carpentieri-Pipolo, V., Zhao, Y. & Venturi, V., Jan 1 2019, In : FEMS microbiology letters. 366, 12, fnz149.

Research output: Contribution to journalArticle

Open Access

The RNA-binding protein CsrA controls virulence in Erwinia amylovora by regulating relA, RcsB, and FlhD at the posttranscriptional level

Lee, J. H., Ancona, V., Chatnaparat, T., Yang, H. W. & Zhao, Y., Oct 2019, In : Molecular Plant-Microbe Interactions. 32, 10, p. 1448-1459 12 p.

Research output: Contribution to journalArticle

2018

Inoculation of Malus genotypes with a set of Erwinia amylovora strains indicates a gene-for-gene relationship between the effector gene eop1 and both Malus floribunda 821 and Malus ‘Evereste’

Wöhner, T. W., Richter, K., Sundin, G. W., Zhao, Y., Stockwell, V. O., Sellmann, J., Flachowsky, H., Hanke, M. V. & Peil, A., May 2018, In : Plant Pathology. 67, 4, p. 938-947 10 p.

Research output: Contribution to journalArticle

Integration of multiple stimuli-sensing systems to regulate HrpS and type III secretion system in Erwinia amylovora

Lee, J. H. & Zhao, Y., Feb 1 2018, In : Molecular Genetics and Genomics. 293, 1, p. 187-196 10 p.

Research output: Contribution to journalArticle

Loss-of-function mutations in the dpp and opp permeases render erwinia amylovora resistant to kasugamycin and blasticidin S

Ge, Y., Lee, J. H., Hu, B. & Zhao, Y., Aug 2018, In : Molecular Plant-Microbe Interactions. 31, 8, p. 823-832 10 p.

Research output: Contribution to journalArticle

2017

Erwinia amylovora in the genomics era: From genomes to pathogen virulence, regulation, and disease control strategies

Smits, T. H. M., Duffy, B., Sundin, G. W., Zhao, Y. F. & Rezzonico, F., 2017, In : Journal of Plant Pathology. 99, Special Issue, p. 7-23 17 p.

Research output: Contribution to journalArticle

Exploring linear and cyclic (DI)-nucleotides as messengers for regulation of T3SS and biofilm formation in erwinia amylovora

Zhao, Y. F. & Sundin, G. W., 2017, In : Journal of Plant Pathology. 99, Special Issue, p. 25-35 11 p.

Research output: Contribution to journalShort survey

The crystal structure of Erwinia amylovora AmyR, a member of the YbjN protein family, shows similarity to type III secretion chaperones but suggests different cellular functions

Bartho, J. D., Bellini, D., Wuerges, J., Demitri, N., Toccafondi, M., Schmitt, A. O., Zhao, Y., Walsh, M. A. & Benini, S., Apr 2017, In : PloS one. 12, 4, e0176049.

Research output: Contribution to journalArticle

Type VI secretion systems of Erwinia amylovora contribute to bacterial competition, virulence, and exopolysaccharide production

Tian, Y., Zhao, Y., Shi, L., Cui, Z., Hu, B. & Zhao, Y., Jun 2017, In : Phytopathology. 107, 6, p. 654-661 8 p.

Research output: Contribution to journalArticle

Tyrosine-610 in the receptor kinase BAK1 does not play a major role in brassinosteroid signaling or innate immunity

Singh, V., Perraki, A., Kim, S. Y., Shrivastava, S., Lee, J. H., Zhao, Y., Schwessinger, B., Oh, M. H., Marshall-Colon, A., Zipfel, C. & Huber, S. C., Aug 2 2017, In : Frontiers in Plant Science. 8, 1273.

Research output: Contribution to journalArticle

2016

Perspectives on the transition from bacterial phytopathogen genomics studies to applications enhancing disease management: From promise to practice

Sundin, G. W., Wang, N., Charkowski, A. O., Castiblanco, L. F., Jia, H. & Zhao, Y., Oct 2016, In : Phytopathology. 106, 10, p. 1071-1082 12 p.

Research output: Contribution to journalReview article

The RNA-binding protein CsrA plays a central role in positively regulating virulence factors in Erwinia amylovora

Ancona, V., Lee, J. H. & Zhao, Y., Nov 15 2016, In : Scientific reports. 6, 37195.

Research output: Contribution to journalArticle

2015

Conserved aspartate and lysine residues of RcsB are required for amylovoran biosynthesis, virulence, and DNA binding in Erwinia amylovora

Ancona, V., Chatnaparat, T. & Zhao, Y., Aug 25 2015, In : Molecular Genetics and Genomics. 290, 4, p. 1265-1276 12 p.

Research output: Contribution to journalArticle

The bacterial alarmone (p)ppGpp activates the type III secretion system in Erwinia amylovora

Ancona, V., Lee, J. H., Chatnaparat, T., Oh, J., Hong, J. I. & Zhao, Y., Jan 1 2015, In : Journal of bacteriology. 197, 8, p. 1433-1443 11 p.

Research output: Contribution to journalArticle

2014

Alternative sigma factor RpoN and its modulation protein YhbH are indispensable for Erwinia amylovora virulence

Ancona, V., Li, W. & Zhao, Y., Jan 1 2014, In : Molecular Plant Pathology. 15, 1, p. 58-66 9 p.

Research output: Contribution to journalArticle

An alternative sigma factor cascade regulates expression of type III secretion system in Erwinia amylovora

Zhao, Y., Ancona, V., Li, W. & Lee, J. H., Oct 29 2014, XIII International Workshop on Fire Blight. Smits, T. H. M., Holliger, E. & Rezzonico, F. (eds.). International Society for Horticultural Science, p. 155-160 6 p. (Acta Horticulturae; vol. 1056).

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomics of erwinia amylovora and related erwinia species associated with pome fruit trees

Zhao, Y., Apr 1 2014, Genomics of Plant-Associated Bacteria. Springer-Verlag Berlin Heidelberg, Vol. 9783642553783. p. 1-36 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Small-molecule inhibitors suppress the expression of both type III secretion and amylovoran biosynthesis genes in Erwinia amylovora

Yang, F., Korban, S. S., Pusey, P. L., Elofsson, M., Sundin, G. W. & Zhao, Y., Jan 1 2014, In : Molecular Plant Pathology. 15, 1, p. 44-57 14 p.

Research output: Contribution to journalArticle

The GrrSA-Csr global regulatory system plays a critical role in Erwinia amylovora virulence

Ancona, V. & Zhao, Y., Oct 29 2014, XIII International Workshop on Fire Blight. Smits, T. H. M., Holliger, E. & Rezzonico, F. (eds.). International Society for Horticultural Science, p. 207-212 6 p. (Acta Horticulturae; vol. 1056).

Research output: Chapter in Book/Report/Conference proceedingChapter

2013

Differential lysine acetylation profiles of Erwinia amylovora strains revealed by proteomics

Wu, X., Vellaichamy, A., Wang, D., Zamdborg, L., Kelleher, N. L., Huber, S. C. & Zhao, Y., Feb 1 2013, In : Journal of Proteomics. 79, p. 60-71 12 p.

Research output: Contribution to journalArticle

Structure of microcin B-like compounds produced by pseudomonas syringae and species specificity of their antibacterial action

Metelev, M., Serebryakov, M., Ghilarov, D., Zhao, Y. & Severinov, K., 2013, In : Journal of bacteriology. 195, 18, p. 4129-4137 9 p.

Research output: Contribution to journalArticle

2012

A high-throughput apple SNP genotyping platform using the GoldenGate™ assay

Khan, M. A., Han, Y., Zhao, Y. F. & Korban, S. S., Feb 25 2012, In : Gene. 494, 2, p. 196-201 6 p.

Research output: Contribution to journalArticle

A Multi-Population Consensus Genetic Map Reveals Inconsistent Marker Order among Maps Likely Attributed to Structural Variations in the Apple Genome

Khan, M. A., Han, Y., Zhao, Y. F., Troggio, M. & Korban, S. S., Nov 5 2012, In : PloS one. 7, 11, e47864.

Research output: Contribution to journalArticle

AmyR Is a Novel Negative Regulator of Amylovoran Production in Erwinia amylovora

Wang, D., Korban, S. S., Pusey, P. L. & Zhao, Y., Sep 18 2012, In : PloS one. 7, 9, e45038.

Research output: Contribution to journalArticle

Controlled release of Pantoea agglomerans E325 for biocontrol of fire blight disease of apple

Kim, I. Y., Pusey, P. L., Zhao, Y., Korban, S. S., Choi, H. & Kim, K. K., Jul 10 2012, In : Journal of Controlled Release. 161, 1, p. 109-115 7 p.

Research output: Contribution to journalArticle

Genetic characterization of the HrpL regulon of the fire blight pathogen Erwinia amylovora reveals novel virulence factors

McNally, R. R., Toth, I. K., Cock, P. J. A., Pritchard, L., Hedley, P. E., Morris, J. A., Zhao, Y. & Sundin, G. W., Feb 2012, In : Molecular Plant Pathology. 13, 2, p. 160-173 14 p.

Research output: Contribution to journalArticle

Genome-wide identification of genes regulated by the rcs phosphorelay system in Erwinia amylovora

Wang, D., Qi, M., Calla, B., Korban, S. S., Clough, S. J., Cock, P. J. A., Sundin, G. W., Toth, I. & Zhao, Y., Jan 1 2012, In : Molecular Plant-Microbe Interactions. 25, 1, p. 6-17 12 p.

Research output: Contribution to journalArticle

2011

Characterization of the RcsC sensor kinase from erwinia amylovora and other enterobacteria

Wang, D., Korban, S. S., Pusey, P. L. & Zhao, Y., Jun 2011, In : Phytopathology. 101, 6, p. 710-717 8 p.

Research output: Contribution to journalArticle

Comparative analysis of the RcsC sensor kinase from Erwinia amylovora and other enterobacteria

Wang, D. P., Zhao, Y. F. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 165-172 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparative genomics of Erwinia amylovora and related Erwinia species-what do we learn?

Zhao, Y. & Qi, M., Sep 2011, In : Genes. 2, 3, p. 627-639 13 p.

Research output: Contribution to journalReview article

Evolution and function of flagellar and non-flagellar type III secretion systems in Erwinia amylovora

Zhao, Y. F., Qi, M. S. & Wang, D. P., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 177-184 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution