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William D Gropp

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  • 2007

    Grid-based image registration

    Gropp, W., Haber, E., Heldmann, S., Keyes, D., Miller, N., Schopf, J. & Yang, T., 2007, Grid-Based Problem Solving Environments: IFIP TC2/ WG 2.5 Working Conference on Grid-Based Problem Solving Environments: Implications for Development and Deployment of Numerical Software. Gaffney, P. W. & Pool, J. C. T. (eds.). p. 435-448 14 p. (IFIP International Federation for Information Processing; vol. 239).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Implementation and evaluation of shared-memory communication and synchronization operations in MPICH2 using the Nemesis communication subsystem

    Buntinas, D., Mercier, G. & Gropp, W., Sep 2007, In: Parallel Computing. 33, 9, p. 634-644 11 p.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Nonuniformly communicating noncontiguous data: A case study with PETSc and MPI

    Balaji, P., Buntinas, D., Balay, S., Smith, B., Thakur, R. & Gropp, W., 2007, Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM. 4227951. (Proceedings - 21st International Parallel and Distributed Processing Symposium, IPDPS 2007; Abstracts and CD-ROM).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Observations on WoCo9

    Gropp, W. D., 2007, Grid-Based Problem Solving Environments: IFIP TC2/ WG 2.5 Working Conference on Grid-Based Problem Solving Environments: Implications for Development and Deployment of Numerical Software. Gaffney, P. W. & Pool, J. C. T. (eds.). p. 451-453 3 p. (IFIP International Federation for Information Processing; vol. 239).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Open issues in MPI implementation

    Thakur, R. & Gropp, W., 2007, Advances in Computer Systems Architecture - 12th Asia-Pacific Conference, ACSAC 2007, Proceedings. Springer, p. 327-338 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4697 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Parallel Implicit Solution of Diffusion-limited Radiation Transport

    Gropp, W. D., Kaushik, D. K., Keyes, D. E. & Smith, B. F., 2007, Domain Decomposition Methods in Science and Engineering XVI. Springer, p. 579-586 8 p. (Lecture Notes in Computational Science and Engineering; vol. 55).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Practical model-checking method for verifying correctness of MPI programs

    Pervez, S., Gopalakrishnan, G., Kirby, R. M., Palmer, R., Thakur, R. & Gropp, W., 2007, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 14th European PVM/MPI Users' Group Meeting, Proceedings. Springer, p. 344-353 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4757 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Revealing the performance of MPI RMA implementations

    Gropp, W. D. & Thakur, R., 2007, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 14th European PVM/MPI Users' Group Meeting, Proceedings. Springer, p. 272-280 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4757 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Self-consistent MPI performance requirements

    Träff, J. L., Gropp, W. & Thakur, R., 2007, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 14th European PVM/MPI Users' Group Meeting, Proceedings. Springer, p. 36-45 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4757 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Test suite for evaluating performance of MPI implementations that support MPI_THREAD_MULTIPLE

    Thakur, R. & Gropp, W., 2007, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 14th European PVM/MPI Users' Group Meeting, Proceedings. Springer, p. 46-55 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4757 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Thread-safety in an MPI implementation: Requirements and analysis

    Gropp, W. & Thakur, R., Sep 2007, In: Parallel Computing. 33, 9, p. 595-604 10 p.

    Research output: Contribution to journal › Article › peer-review

  • Using MPI-2: A problem-based approach

    Gropp, W. D. & Lusk, E., 2007, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 14th European PVM/MPI Users' Group Meeting, Proceedings. Springer, p. 12 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4757 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • 2006

    Advanced MPI: I/O and one-sided communication

    Gropp, W., Lusk, E., Thakur, R. & Ross, R., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188666. (Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • An interface to support the identification of dynamic MPI 2 processes for scalable parallel debugging

    Gottbrath, C., Barrett, B., Gropp, B., Lusk, E. & Squyres, J., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 115-122 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Application supercomputing and multiscale simulation techniques

    Koniges, A. E., Gropp, W., Lusk, E. & Eder, D. C., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188679. (Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Automatic memory optimizations for improving MPI derived datatype performance

    Byna, S., Sun, X. H., Thakur, R. & Gropp, W., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 238-246 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Awards session

    Reed, D., Gropp, B., Sussman, A., Evans, J., Fussell, P., Montano, D. & Paden, R. L., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188704. (Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Collective communication on architectures that support simultaneous communication over multiple links

    Chan, E., Van De Geijn, R., Gropp, W. & Thakur, R., 2006, Proceedings of the 2006 ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP'06. Association for Computing Machinery, p. 2-11 10 p. (Proceedings of the ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, PPOPP; vol. 2006).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Data transfers between processes in an SMP system: Performance study and application to MPI

    Buntinas, D., Mercier, G. & Gropp, W., 2006, ICPP 2006: Proceedings of the 2006 International Conference on Parallel Processing. p. 487-494 8 p. 1690653. (Proceedings of the International Conference on Parallel Processing).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Design and evaluation of nemesis, a scalable, low-latency, message-passing communication subsystem

    Buntinas, D., Mercier, G. & Gropp, W., 2006, Sixth IEEE International Symposium on Cluster Computing and the Grid: Spanning the World and Beyond, 2006. CCGRID 06. p. 521-530 10 p. 1630865. (Sixth IEEE International Symposium on Cluster Computing and the Grid, 2006. CCGRID 06).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Formal verification of programs that use MPI one-sided communication

    Pervez, S., Gopalakrishnan, G., Kirby, R. M., Thakur, R. & Gropp, W., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 30-39 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • High performance file I/O for the blue gene/L supercomputer

    Yu, H., Sahoo, R. K., Howson, C., Almási, G., Castaños, J. G., Gupta, M., Moreira, J. E., Parker, J. J., Engelsiepen, T. E., Ross, R. B., Thakur, R., Latham, R. & Gropp, W. D., 2006, Proceedings - Twelfth International Symposium on High-Performance Computer Architecture, 2006. p. 190-199 10 p. 1598125. (Proceedings - International Symposium on High-Performance Computer Architecture; vol. 2006).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Implementation and shared-memory evaluation of MPICH2 over the Nemesis communication subsystem

    Buntinas, D., Mercier, G. & Gropp, W., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 86-95 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access

  • Issues in developing a thread-safe MPI implementation

    Gropp, W. & Thakur, R., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 12-21 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Message from the program chair

    Gropp, W., 2006, In: Proceedings - IEEE International Conference on Cluster Computing, ICCC. 4100338.

    Research output: Contribution to journal › Editorial › peer-review

  • Multi-core for HPC: Breakthrough or breakdown?

    Sterling, T., Kogge, P., Dally, W. J., Scott, S., Gropp, W., Keyes, D. & Beckman, P., 2006, Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06. 1188532. (Proceedings of the 2006 ACM/IEEE Conference on Supercomputing, SC'06).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Parallel programming models applicable to cluster computing and beyond

    Kendall, R. A., Sosonkina, M., Gropp, W. D., Numrich, R. W. & Sterling, T., 2006, Numerical Solution of Partial Differential Equations on Parallel Computers. Springer, p. 3-54 52 p. (Lecture Notes in Computational Science and Engineering; vol. 51).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Using MPI-2: A problem-based approach

    Gropp, W. D. & Lusk, E., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 7 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Where does MPI need to grow?

    Gropp, W. D., 2006, Recent Advances in Parallel Virtual Machine and Message Passing Interface - 13th European PVM/MPI User's Group Meeting, Proceedings. Springer, p. 3 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 4192 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

    Open Access
  • 2005

    An evaluation of implementation options for MPI one-sided communication

    Gropp, W. & Thakur, R., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). p. 415-424 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3666 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Collective error detection for MPI collective operations

    Falzone, C., Chan, A., Lusk, E. & Gropp, W., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). p. 138-147 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3666 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Design and implementation of message-passing services for the Blue Gene/L supercomputer

    Almási, G., Archer, C., Castaños, J. G., Gunnels, J. A., Erway, C. C., Heidelberger, P., Martorell, X., Moreira, J. E., Pinnow, K., Ratterman, J., Steinmacher-Burow, B. D., Gropp, W. & Toonen, B., 2005, In: IBM Journal of Research and Development. 49, 2-3, p. 393-406 14 p.

    Research output: Contribution to journal › Article › peer-review

  • Designing a common communication subsystem

    Buntinas, D. & Gropp, W., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). p. 156-166 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3666 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Implementing MPI-IO atomic mode without file system support

    Ross, R., Latham, R., Gropp, W. D., Thakur, R. & Toonen, B., 2005, 2005 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2005. p. 1135-1142 8 p. 1558687. (2005 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2005; vol. 2).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Optimization of collective communication operations in MPICH

    Thakur, R., Rabenseifner, R. & Gropp, W., Mar 2005, In: International Journal of High Performance Computing Applications. 19, 1, p. 49-66 18 p.

    Research output: Contribution to journal › Article › peer-review

  • Optimizing the synchronization operations in message passing interface one-sided communication

    Thakur, R., Gropp, W. & Toonen, B., Jun 2005, In: International Journal of High Performance Computing Applications. 19, 2 SPEC. ISS., p. 119-128 10 p.

    Research output: Contribution to journal › Article › peer-review

  • Towards a productive MPI environment

    Gropp, W. D., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). p. 4 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3666 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Using MPI-2: A problem-based approach

    Gropp, W. & Lusk, E., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). p. 8 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3666 LNCS).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • 2004

    Design and implementation of MPICH2 over InfiniBand with RDMA support

    Liu, J., Jiang, W., Wyckoff, P., Panda, D. K., Ashton, D., Buntinas, D., Gropp, W. & Toonen, B., 2004, Proceedings - 18th International Parallel and Distributed Processing Symposium, IPDPS 2004 (Abstracts and CD-ROM). p. 223-232 10 p. (Proceedings - International Parallel and Distributed Processing Symposium, IPDPS 2004 (Abstracts and CD-ROM); vol. 18).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Efficient implementation of MPI-2 Passive one-sided communication on infiniband clusters

    Jiang, W., Liu, J., Jin, H. W., Panda, D. K., Buntinas, D., Thakur, R. & Gropp, W. D., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Kranzlmuller, D., Kacsuk, P. & Dongarra, J. (eds.). Springer, p. 68-76 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3241).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Evaluating structured I/O methods for parallel file systems

    Ching, A., Choudhary, A., Liao, W. K., Ross, R. & Gropp, W., 2004, In: International Journal of High Performance Computing and Networking. 2, 2-4, p. 133-145 13 p.

    Research output: Contribution to journal › Article › peer-review

  • Fault tolerance in message passing interface programs

    Gropp, W. & Lusk, E., Sep 2004, In: International Journal of High Performance Computing Applications. 18, 3, p. 363-372 10 p.

    Research output: Contribution to journal › Article › peer-review

  • High performance MPI-2 one-sided communication over InfiniBand

    Jiang, W., Liu, J., Jin, H. W., Panda, D. K., Gropp, W. & Thakur, R., 2004, 2004 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2004. p. 531-538 8 p. (2004 IEEE International Symposium on Cluster Computing and the Grid, CCGrid 2004).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Implementing MPI on the BlueGene/L supercomputer

    Almási, G., Archer, C., Castanõs, J. G., Chris Erway, C., Heidelberger, P., Martorell, X., Moreira, J. E., Pinnow, K., Ratterman, J., Smeds, N., Steinmacher-burow, B., Gropp, W. & Toonen, B., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Danelutto, M., Vanneschi, M. & Laforenza, D. (eds.). Springer, p. 833-845 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3149).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

    Open Access

  • Minimizing synchronization overhead in the implementation of MPI one-sided communication

    Thakur, R., Gropp, W. D. & Toonen, B., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Kranzlmuller, D., Kacsuk, P. & Dongarra, J. (eds.). Springer, p. 57-67 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3241).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • MPI and high productivity programming

    Gropp, W. D., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Kranzlmuller, D., Kacsuk, P. & Dongarra, J. (eds.). Springer, p. 7 1 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3241).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Predicting memory-access cost based on data-access patterns

    Byna, S., Sun, X. H., Gropp, W. D. & Thakur, R., 2004, 2004 IEEE International Conference on Cluster Computing, ICCC 2004. p. 327-336 10 p. (Proceedings - IEEE International Conference on Cluster Computing, ICCC).

    Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Providing efficient I/O redundancy in MPI environments

    Gropp, W. D., Ross, R. & Miller, N., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Kranzlmuller, D., Kacsuk, P. & Dongarra, J. (eds.). Springer, p. 77-86 10 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3241).

    Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • 2003

    Beowulf Cluster Computing with Linux

    Gropp, W. D. (Editor), Lusk, E. (Editor) & Sterling, T. L. (Editor), Nov 2003, 2 ed. Cambridge: MIT Press. (Scientific and Engineering Computation)

    Research output: Book/Report/Conference proceeding › Book

  • Cluster 2001

    Baker, M. (Editor), Katz, D. S. (Editor), Gropp, W. D. (Editor) & Sterling, T. (Editor), 2003, In: Concurrency and Computation: Practice and Experience. 15, 7-8, p. 623-777

    Research output: Contribution to journal › Special issue › peer-review