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Research Output

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2014

Large-scale multiple sequence alignment and tree estimation using saté

Liu, K. & Warnow, T., 2014, Multiple Sequence Alignment Methods. Humana Press Inc., p. 219-244 26 p. (Methods in Molecular Biology; vol. 1079).

Research output: Chapter in Book/Report/Conference proceedingChapter

2003

Towards the development of computational tools for evaluating phylogenetic network reconstruction methods.

Nakhleh, L., Sun, J., Warnow, T., Linder, C. R., Moret, B. M. E. & Tholse, A., Aug 18 2003, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 315-326 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2002

Fast phylogenetic methods for the analysis of genome rearrangement data: an empirical study.

Wang, L. S., Jansen, R. K., Moret, B. M. E., Raubeson, L. A. & Warnow, T., Apr 3 2002, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 524-535 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

The accuracy of fast phylogenetic methods for large datasets.

Nakhleh, L., Moret, B. M. E., Roshan, U., St John, K., Sun, J. & Warnow, T., Apr 3 2002, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 211-222 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2001

A new implementation and detailed study of breakpoint analysis.

Moret, B. M., Wyman, S., Bader, D. A., Warnow, T. & Yan, M., Mar 23 2001, Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing. p. 583-594 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2000

A new fast heuristic for computing the breakpoint phylogeny and experimental phylogenetic analyses of real and synthetic data.

Cosner, M. E., Jansen, R. K., Moret, B. M., Raubeson, L. A., Wang, L. S., Warnow, T. & Wyman, S., Dec 1 2000, Proceedings / . International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology. Vol. 8. p. 104-115 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

1999

Obtaining highly accurate topology estimates of evolutionary trees from very short sequences

Huson, D. H., Nettles, S. & Warnow, T., Jan 1 1999, Proceedings of the Annual International Conference on Computational Molecular Biology, RECOMB. New York, NY, United States: ACM, p. 198-207 10 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Solving large scale phylogenetic problems using DCM2.

Huson, D. H., Vawter, L. & Warnow, T., Dec 1 1999, Proceedings / . International Conference on Intelligent Systems for Molecular Biology ; ISMB. International Conference on Intelligent Systems for Molecular Biology. p. 118-129 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter