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Fingerprint Fingerprint is based on mining the text of the expert's scholarly documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

Polynomials Engineering & Materials Science
Genes Engineering & Materials Science
Phylogeny Medicine & Life Sciences
Sequence Alignment Medicine & Life Sciences
Phylogenetics Mathematics
Joining Engineering & Materials Science
Evolutionary Tree Mathematics
Genome Medicine & Life Sciences

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 1990 2019

Phylogeny
Joining
Scalability
Large Data Sets
Polynomials

Long-Branch Attraction in Species Tree Estimation: Inconsistency of Partitioned Likelihood and Topology-Based Summary Methods

Roch, S., Nute, M. & Warnow, T., Mar 1 2019, In : Systematic biology. 68, 2, p. 281-297 17 p.

Research output: Contribution to journalArticle

topology
loci
methodology
gene
genomics

Are Profile Hidden Markov Models Identifiable?

Pattabiraman, S. & Warnow, T., Aug 15 2018, ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 448-456 9 p. (ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Hidden Markov models
Computational Biology
Sequence Alignment
Statistical Models
Bioinformatics

A roadmap for global synthesis of the plant tree of life

Eiserhardt, W. L., Antonelli, A., Bennett, D. J., Botigué, L. R., Burleigh, J. G., Dodsworth, S., Enquist, B. J., Forest, F., Kim, J. T., Kozlov, A. M., Leitch, I. J., Maitner, B. S., Mirarab, S., Piel, W. H., Pérez-Escobar, O. A., Pokorny, L., Rahbek, C., Sandel, B., Smith, S. A., Stamatakis, A. & 3 othersVos, R. A., Warnow, T. & Baker, W. J., Mar 1 2018, In : American journal of botany. 105, 3, p. 614-622 9 p.

Research output: Contribution to journalArticle

synthesis
phylogeny
phylogenetics
informatics
botanists

Gene tree parsimony for incomplete gene trees: Addressing true biological loss

Bayzid, M. S. & Warnow, T., Jan 19 2018, In : Algorithms for Molecular Biology. 13, 1, 1.

Research output: Contribution to journalArticle

Parsimony
Genes
Gene
Incompleteness
Duplication

Datasets

Datasets from the study: Optimal completion of incomplete gene trees in polynomial time using OCTAL

Christensen, S. (Creator), Molloy, E. K. (Creator), Vachaspati, P. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, 2017

Dataset

Using INC within Divide-and-Conquer Phylogeny Estimation - Datasets

Rao, S. (Creator), Zhang, Q. (Creator), Molloy, E. K. (Creator), Sy, A. (Creator), Le, T. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jan 24 2019

Dataset

PASTA For Proteins Data (BALiBASE)

Collins, K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Apr 6 2018

Dataset

NJMerge: A generic technique for scaling phylogeny estimation methods and its application to species trees

Molloy, E. K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jul 29 2018

Dataset

HIPPI Dataset

Nguyen, N. (Creator), Nute, M. (Creator), Mirarab, S. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Aug 16 2016

Dataset