If you made any changes in Pure, your changes will be visible here soon.

Fingerprint Fingerprint is based on mining the text of the expert's scholarly documents to create an index of weighted terms, which defines the key subjects of each individual researcher.

  • 1 Similar Profiles
Polynomials Engineering & Materials Science
Genes Engineering & Materials Science
Sequence Alignment Medicine & Life Sciences
Phylogeny Medicine & Life Sciences
Phylogenetics Mathematics
Evolutionary Tree Mathematics
Genome Medicine & Life Sciences
Joining Engineering & Materials Science

Network Recent external collaboration on country level. Dive into details by clicking on the dots.

Research Output 1990 2018

Are Profile Hidden Markov Models Identifiable?

Pattabiraman, S. & Warnow, T., Aug 15 2018, ACM-BCB 2018 - Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 448-456 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bioinformatics
Hidden Markov models
Computational Biology
Statistics
Proteins

A roadmap for global synthesis of the plant tree of life

Eiserhardt, W. L., Antonelli, A., Bennett, D. J., Botigué, L. R., Burleigh, J. G., Dodsworth, S., Enquist, B. J., Forest, F., Kim, J. T., Kozlov, A. M., Leitch, I. J., Maitner, B. S., Mirarab, S., Piel, W. H., Pérez-Escobar, O. A., Pokorny, L., Rahbek, C., Sandel, B., Smith, S. A., Stamatakis, A. & 3 othersVos, R. A., Warnow, T. & Baker, W. J., Jan 1 2018, (Accepted/In press) In : American journal of botany.

Research output: Contribution to journalArticle

synthesis
phylogeny
phylogenetics
informatics
botanists

Gene tree parsimony for incomplete gene trees: Addressing true biological loss

Bayzid, M. S. & Warnow, T., Jan 19 2018, In : Algorithms for Molecular Biology. 13, 1, 1.

Research output: Contribution to journalArticle

Parsimony
Genes
Gene
Incompleteness
Duplication

New absolute fast converging phylogeny estimation methods with improved scalability and accuracy

Zhang, Q., Rao, S. & Warnow, T., Aug 1 2018, 18th International Workshop on Algorithms in Bioinformatics, WABI 2018. Parida, L. & Ukkonen, E. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, Vol. 113. 8

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Scalability
Joining
Polynomials
Trees (mathematics)
Maximum likelihood

NJMerge: A Generic technique for scaling phylogeny estimation methods and its application to species trees

Molloy, E. K. & Warnow, T., Jan 1 2018, Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Proceedings. Ouangraoua, A. & Blanchette, M. (eds.). Springer-Verlag, p. 260-276 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11183 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phylogeny
Scaling
Scalability
Subset
Divide and conquer

Datasets

PASTA For Proteins Data (BALiBASE)

Collins, K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Apr 6 2018

Dataset

Data from: The Performance of Coalescent-Based Species Tree Estimation Methods under Models of Missing Data

Nute, M. (Creator), Chou, J. (Creator), Molloy, E. K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, 2017

Dataset

NJMerge: A generic technique for scaling phylogeny estimation methods and its application to species trees

Molloy, E. K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jul 29 2018

Dataset

Data from: Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge

Molloy, E. K. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Nov 19 2018

Dataset

HIPPI Dataset

Nguyen, N. (Creator), Nute, M. (Creator), Mirarab, S. (Creator), Warnow, T. (Creator), University of Illinois at Urbana-Champaign, 2016

Dataset