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2020

LncRNA-mediated regulation of SOX9 expression in basal subtype breast cancer cells

Tariq, A., Hao, Q., Sun, Q., Singh, D. K., Jadaliha, M., Zhang, Y., Chetlangia, N., Ma, J., Holton, S. E., Bhargava, R., Lal, A., Prasanth, S. G. & Prasanth, K. V., Jan 1 2020, In : RNA. 26, 2, p. 175-185 11 p.

Research output: Contribution to journalArticle

ORCA/LRWD1 Regulates Homologous Recombination at ALT-Telomeres by Modulating Heterochromatin Organization

Hsu, R. Y. C., Lin, Y. C., Redon, C., Sun, Q., Singh, D. K., Wang, Y., Aggarwal, V., Mitra, J., Matur, A., Moriarity, B., Ha, T., Aladjem, M. I., Prasanth, K. V. & Prasanth, S. G., May 22 2020, In : iScience. 23, 5, 101038.

Research output: Contribution to journalArticle

Open Access
2018

A natural antisense lncRNA controls breast cancer progression by promoting tumor suppressor gene mRNA stability

Jadaliha, M., Gholamalamdari, O., Tang, W., Zhang, Y., Petracovici, A., Hao, Q., Tariq, A., Kim, T. G., Holton, S. E., Singh, D. K., Li, X. L., Freier, S. M., Ambs, S., Bhargava, R., Lal, A., Prasanth, S. G., Ma, J. & Prasanth, K. V., Nov 2018, In : PLoS genetics. 14, 11, e1007802.

Research output: Contribution to journalArticle

MIR100 host gene-encoded lncRNAs regulate cell cycle by modulating the interaction between HuR and its target mRNAs

Sun, Q., Tripathi, V., Yoon, J. H., Singh, D. K., Hao, Q., Min, K. W., Davila, S., Zealy, R. W., Li, X. L., Polycarpou-Schwarz, M., Lehrmann, E., Zhang, Y., Becker, K. G., Freier, S. M., Zhu, Y., Diederichs, S., Prasanth, S. G., Lal, A., Gorospe, M. & Prasanth, K. V., 2018, In : Nucleic acids research. 46, 19, p. 10405-10416 12 p.

Research output: Contribution to journalArticle

PCNA-mediated stabilization of E3 ligase RFWD3 at the replication fork is essential for DNA replication

Lin, Y. C., Wang, Y., Hsu, R., Giri, S., Wopat, S., Arif, M. K., Chakraborty, A., Prasanth, K. V. & Prasanth, S. G., Dec 26 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 52, p. 13282-13287 6 p.

Research output: Contribution to journalArticle

2017

ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins

Anantharaman, A., Tripathi, V., Khan, A., Yoon, J. H., Singh, D. K., Gholamalamdari, O., Guang, S., Ohlson, J., Wahlstedt, H., Öhman, M., Jantsch, M. F., Conrad, N. K., Ma, J., Gorospe, M., Prasanth, S. G. & Prasanth, K. V., Apr 20 2017, In : Nucleic acids research. 45, 7, p. 4189-4201 13 p.

Research output: Contribution to journalArticle

PSIP1/p75 promotes tumorigenicity in breast cancer cells by promoting the transcription of cell cycle genes

Singh, D. K., Gholamalamdari, O., Jadaliha, M., Li, X. L., Lin, Y. C., Zhang, Y., Guang, S., Hashemikhabir, S., Tiwari, S., Zhu, Y. J., Khan, A., Thomas, A., Chakraborty, A., Macias, V., Balla, A. K., Bhargava, R., Janga, S. C., Ma, J., Prasanth, S. G., Lal, A. & 1 others, Prasanth, K. V., Oct 1 2017, In : Carcinogenesis. 38, 10, p. 966-975 10 p., bgx062.

Research output: Contribution to journalArticle

Temporal association of ORCA/LRWD1 to late-firing origins during G1 dictates heterochromatin replication and organization

Wang, Y., Khan, A., Marks, A. B., Smith, O. K., Giri, S., Lin, Y. C., Creager, R., MacAlpine, D. M., Prasanth, K. V., Aladjem, M. I. & Prasanth, S. G., Mar 17 2017, In : Nucleic acids research. 45, 5, p. 2490-2502 13 p.

Research output: Contribution to journalArticle

2016

Functional and prognostic significance of long non-coding RNA MALAT1 as a metastasis driver in ER negative lymph node negative breast cancer

Jadaliha, M., Zong, X., Malakar, P., Ray, T., Singh, D. K., Freier, S. M., Jensen, T., Prasanth, S. G., Karni, R., Ray, P. S. & Prasanth, K. V., Jan 1 2016, In : Oncotarget. 7, 26, p. 40418-40436 19 p.

Research output: Contribution to journalArticle

Natural antisense RNA promotes 3′ end processing and maturation of MALAT1 lncRNA

Zong, X., Nakagawa, S., Freier, S. M., Fei, J., Ha, T., Prasanth, S. G. & Prasanth, K. V., Jan 29 2016, In : Nucleic acids research. 44, 6, p. 2898-2908 11 p.

Research output: Contribution to journalArticle

Orc5 induces large-scale chromatin decondensation in a GCN5-dependent manner

Giri, S., Chakraborty, A., Sathyan, K. M., Prasanth, K. V. & Prasanth, S. G., 2016, In : Journal of cell science. 129, 2, p. 417-429 13 p.

Research output: Contribution to journalArticle

Paraspeckles modulate the intranuclear distribution of paraspeckle-associated Ctn RNA

Anantharaman, A., Jadaliha, M., Tripathi, V., Nakagawa, S., Hirose, T., Jantsch, M. F., Prasanth, S. G. & Prasanth, K. V., Sep 26 2016, In : Scientific reports. 6, 34043.

Research output: Contribution to journalArticle

Phase correlation imaging of unlabeled cell dynamics

Ma, L., Rajshekhar, G., Wang, R., Bhaduri, B., Sridharan, S., Mir, M., Chakraborty, A., Iyer, R., Prasanth, S., Millet, L., Gillette, M. U. & Popescu, G., Sep 12 2016, In : Scientific reports. 6, 32702.

Research output: Contribution to journalArticle

2015

Association of ORCA/LRWD1 with repressive histone methyl transferases mediates heterochromatin organization

Giri, S. & Prasanth, S. G., Jan 1 2015, In : Nucleus. 6, 6, p. 435-441 7 p.

Research output: Contribution to journalArticle

BEND3 mediates transcriptional repression and heterochromatin organization

Khan, A. & Prasanth, S. G., Oct 20 2015, In : Transcription. 6, 5, p. 102-105 4 p.

Research output: Contribution to journalArticle

BEND3 represses rDNA transcription by stabilizing a NoRC component via USP21 deubiquitinase

Khan, A., Giri, S., Wang, Y., Chakraborty, A., Ghosh, A. K., Anantharaman, A., Aggarwal, V., Sathyan, K. M., Ha, T., Prasanth, K. V. & Prasanth, S. G., Jul 7 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 27, p. 8338-8343 6 p.

Research output: Contribution to journalArticle

Orc1 binding to mitotic chromosomes precedes spatial patterning during G1 phase and assembly of the origin recognition complex in human cells

Kara, N., Hossain, M., Prasanth, S. G. & Stillman, B., May 8 2015, In : Journal of Biological Chemistry. 290, 19, p. 12355-12369 15 p.

Research output: Contribution to journalArticle

The preRC protein ORCA organizes heterochromatin by assembling histone H3 lysine 9 methyltransferases on chromatin

Giri, S., Aggarwal, V., Pontis, J., Shen, Z., Chakraborty, A., Khan, A., Mizzen, C., Prasanth, K. V., Ait-Si-Ali, S., Ha, T. & Prasanth, S. G., Apr 29 2015, In : eLife. 2015, 4, p. 1-54 54 p., e06496.

Research output: Contribution to journalArticle

2014

Dynamic phosphorylation of HP1α regulates mitotic progression in human cells

Chakraborty, A., Prasanth, K. V. & Prasanth, S. G., Mar 12 2014, In : Nature communications. 5, 3445.

Research output: Contribution to journalArticle

Phosphorylation-dephosphorylation cycle of HP1á governs accurate mitotic progression

Chakraborty, A. & Prasanth, S. G., Jun 1 2014, In : Cell Cycle. 13, 11, p. 1663-1670 8 p.

Research output: Contribution to journalArticle

2013

Long Noncoding RNA MALAT1 Controls Cell Cycle Progression by Regulating the Expression of Oncogenic Transcription Factor B-MYB

Tripathi, V., Shen, Z., Chakraborty, A., Giri, S., Freier, S. M., Wu, X., Zhang, Y., Gorospe, M., Prasanth, S. G., Lal, A. & Prasanth, K. V., 2013, In : PLoS genetics. 9, 3, e1003368.

Research output: Contribution to journalArticle

2012

Dynamic association of orca with prereplicative complex components regulates dna replication initiation

Shen, Z., Chakraborty, A., Jain, A., Giri, S., Ha, T., Prasanth, K. V. & Prasanth, S. G., Aug 1 2012, In : Molecular and cellular biology. 32, 15, p. 3107-3120 14 p.

Research output: Contribution to journalArticle

Orc2 protects ORCA from ubiquitin-mediated degradation

Shen, Z. & Prasanth, S. G., Oct 1 2012, In : Cell Cycle. 11, 19, p. 3578-3589 12 p.

Research output: Contribution to journalArticle

Replicating and transcribing on twisted roads of chromatin

Giri, S. & Prasanth, S. G., May 1 2012, In : Briefings in Functional Genomics. 11, 3, p. 188-204 17 p., elr047.

Research output: Contribution to journalArticle

2011

A BEN-domain-containing protein associates with heterochromatin and represses transcription

Sathyan, K. M., Shen, Z., Tripathi, V., Prasanth, K. V. & Prasanth, S. G., Sep 15 2011, In : Journal of cell science. 124, 18, p. 3149-3163 15 p.

Research output: Contribution to journalArticle

Optical measurement of cycle-dependent cell growth

Mir, M., Wang, Z., Shen, Z., Bednarz, M., Bashir, R., Golding, I., Prasanth, S. G. & Popescu, G., Aug 9 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 32, p. 13124-13129 6 p.

Research output: Contribution to journalArticle

"ORCanization" On heterochromatin linking DNA replication initiation to chromatin organization

Chakraborty, A., Shen, Z. & Prasanth, S. G., Jun 2011, In : Epigenetics. 6, 6, p. 665-670 6 p.

Research output: Contribution to journalArticle

Spatial light interference tomography (SLIT)

Wang, Z., Marks, D. L., Carney, P. S., Millet, L. J., Gillette, M. U., Mihi, A., Braun, P. V., Shen, Z., Prasanth, S. G. & Popescu, G., Oct 10 2011, In : Optics Express. 19, 21, p. 19907-19918 12 p.

Research output: Contribution to journalArticle

2010

A WD-repeat protein stabilizes ORC binding to chromatin

Shen, Z., Sathyan, K. M., Geng, Y., Zheng, R., Chakraborty, A., Freeman, B., Wang, F., Prasanth, K. V. & Prasanth, S. G., Oct 8 2010, In : Molecular cell. 40, 1, p. 99-111 13 p.

Research output: Contribution to journalArticle

Polypurine-repeat-containing RNAs: A novel class of long non-coding RNA in mammalian cells

Zheng, R., Shen, Z., Tripathi, V., Xuan, Z., Freier, S. M., Bennett, C. F., Prasanth, S. G. & Prasanth, K. V., Nov 1 2010, In : Journal of cell science. 123, 21, p. 3734-3744 11 p.

Research output: Contribution to journalArticle

The nuclear-retained noncoding RNA MALAT1 regulates alternative splicing by modulating SR splicing factor phosphorylation

Tripathi, V., Ellis, J. D., Shen, Z., Song, D. Y., Pan, Q., Watt, A. T., Freier, S. M., Bennett, C. F., Sharma, A., Bubulya, P. A., Blencowe, B. J., Prasanth, S. G. & Prasanth, K. V., Sep 2010, In : Molecular cell. 39, 6, p. 925-938 14 p.

Research output: Contribution to journalArticle

2009

Orc1 controls centriole and centrosome copy number in human cells

Hemerly, A. S., Prasanth, S. G., Siddiqui, K. & Stillman, B., Feb 6 2009, In : Science. 323, 5915, p. 789-793 5 p.

Research output: Contribution to journalArticle

2005

Regulating gene expression through RNA nuclear retention

Prasanth, K. V., Prasanth, S. G., Xuan, Z., Hearn, S., Freier, S. M., Bennett, C. F., Zhang, M. Q. & Spector, D. L., Oct 21 2005, In : Cell. 123, 2, p. 249-263 15 p.

Research output: Contribution to journalArticle

2004

A 1.3 kb satellite DNA from Bubalus bubalis not conserved evolutionarily is transcribed

Bhatnagar, S., Bashamboo, A., Chattopadhyay, M., Gangadharan, S. & Ali, S., Nov 1 2004, In : Zeitschrift fur Naturforschung - Section C Journal of Biosciences. 59, 11-12, p. 874-879 6 p.

Research output: Contribution to journalArticle

Dynamics of pre-replication complex proteins during the cell division cycle

Prasanth, S. G., Méndez, J., Prasanth, K. V. & Stillman, B., Jan 29 2004, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 359, 1441, p. 7-16 10 p.

Research output: Contribution to journalArticle

Expression of Protooncogene c-kit Receptor in Rat Testis and Uniqueness of Extracellular Domain Across the Species with Potential in Molecular Phylogeny

Prasanth, S. G., Chattopadhyay, M., Bhat, K. V. & Ali, S., Jan 1 2004, In : DNA and Cell Biology. 23, 1, p. 35-43 9 p.

Research output: Contribution to journalArticle

Human Orc2 localizes to centrosomes, centromeres and heterochromatin during chromosome inheritance

Prasanth, S. G., Prasanth, K. V., Siddiqui, K., Spector, D. L. & Stillman, B., Jul 7 2004, In : EMBO Journal. 23, 13, p. 2651-2663 13 p.

Research output: Contribution to journalArticle

2003

Development of a DNA marker by minisatellite associated sequence amplification (MASA) from the endangered Indian rhino (Rhinoceros unicornis)

Kapur, V., Prasanth, S. G., O'Ryan, C., Azfer, M. A. & Ali, S., Feb 2003, In : Molecular and Cellular Probes. 17, 1, p. 1-4 4 p.

Research output: Contribution to journalArticle

Sequential entry of components of gene expression machinery into daughter nucleiv

Prasanth, K. V., Sacco-Bubulya, P. A., Prasanth, S. G. & Spector, D. L., Mar 1 2003, In : Molecular biology of the cell. 14, 3, p. 1043-1057 15 p.

Research output: Contribution to journalArticle

2002

Orc6 involved in DNA replication, chromosome segregation, and cytokinesis

Prasanth, S. G., Prasanth, K. V. & Stillman, B., Aug 9 2002, In : Science. 297, 5583, p. 1026-1031 6 p.

Research output: Contribution to journalArticle

2001

GATA/GACA repeat sequences are transcribed in the normal fertile rat Rattus norvegicus, but not in the infertile ones

Gangadharan, S., Kapur, V. & Ali, S., Nov 25 2001, In : Current Science. 81, 10, p. 1320-1324 5 p.

Research output: Contribution to journalArticle

Satellite-tagged transcribing sequences in Bubalus bubalis genome undergo programmed modulation in meiocytes: Possible implications for transcriptional inactivation

Chattopadhyay, M., Gangadharan, S., Kapur, V., Azfer, M. A., Prakash, B. & Ali, S., Sep 1 2001, In : DNA and Cell Biology. 20, 9, p. 587-593 7 p.

Research output: Contribution to journalArticle

1999

A bubaline-derived satellite DNA probe uncovers generic affinities of gaur with other bovids

Ray, P., Gangadharan, S., Chattopadhyay, M., Bashamboo, A., Bhatnagar, S., Malik, P. K. & Ali, S., Sep 1999, In : Journal of Biosciences. 24, 3, p. 295-299 5 p.

Research output: Contribution to journalArticle