Stephen R Downie

1987 …2019
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Research Output 1987 2019

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2019

A comparative analysis of complete plastid genomes from Prangos fedtschenkoi and Prangos lipskyi (Apiaceae)

Mustafina, F. U., Yi, D. K., Choi, K., Shin, C. H., Tojibaev, K. S. & Downie, S. R., Jan 2019, In : Ecology and Evolution. 9, 1, p. 364-377 14 p.

Research output: Contribution to journalArticle

Prangos
Apiaceae
plastid
genome
intergenic DNA

Assembling and analysis of sanicula orthacantha chloroplast genome

Chen, Z., Yao, X., Downie, S. R. & Wang, Q., Apr 2019, In : Biodiversity Science. 27, 4, p. 366-372 7 p.

Research output: Contribution to journalArticle

Sanicula
chloroplast
genome
gene
genes

Evolutionary shifts in fruit dispersal syndromes in Apiaceae tribe Scandiceae

Wojewódzka, A., Baczyński, J., Banasiak, Ł., Downie, S. R., Czarnocka-Cieciura, A., Gierek, M., Frankiewicz, K. & Spalik, K., May 1 2019, In : Plant Systematics and Evolution. 305, 5, p. 401-414 14 p.

Research output: Contribution to journalArticle

Open Access
Apiaceae
fruit
fruits
anemochory
spine (bones)

Floral Organogenesis in Three Members of the Tribe Delphinieae (Ranunculaceae)

Chang, H., Downie, S. R., Peng, H. & Sun, F., Nov 11 2019, In : Plants. 8, 11, 493.

Research output: Contribution to journalArticle

Open Access
Consolida ajacis
Ranunculaceae
organogenesis
calyx
flower

Laserocarpum, a new genus of Apiaceae endemic to Greece

Spalik, K., Wojewódzka, A., Constantinidis, T., Downie, S. R., Gierek, M. & Banasiak, Ł., Jan 1 2019, In : Acta Societatis Botanicorum Poloniae. 88, 3, 3635.

Research output: Contribution to journalArticle

Open Access
Portenschlagiella
Laserpitium
Apiaceae
Greece
new genus
2018

Genome-wide searches and molecular analyses highlight the unique evolutionary path of flavone synthase i (FNSI) in Apiaceae

Wang, Q. Z., Downie, S. R., Chen, Z. X. & McIntyre, C. L., Jan 1 2018, In : Genome. 61, 2, p. 103-109 7 p.

Research output: Contribution to journalArticle

flavone
Apiaceae
Genome
Genes

Rampant polyphyly in the Arracacia clade (Apiaceae) and an assessment of the phylogenetic utility of 20 noncoding plastid loci

Danderson, C. A., Downie, S. R. & Hermann, M., Jan 2018, In : Molecular Phylogenetics and Evolution. 118, p. 286-305 20 p.

Research output: Contribution to journalArticle

Arracacia
Apiaceae
polyphyly
Plastids
plastid

Try Tri again? Resolving species boundaries in the Lomatium triternatum (Apiaceae) complex

Smith, J. F., Mansfield, D. H., Stevens, M., Sosa, E., Feist, M. A. E., Downie, S. R., Plunkett, G. M. & Darrach, M., May 2018, In : Journal of Systematics and Evolution. 56, 3, p. 218-230 13 p.

Research output: Contribution to journalArticle

Lomatium
Apiaceae
phylogeny
species concept
niches
2017
Heracleum
Apiaceae
Angelica
Fruit
fruit
2016

A taxonomic study of the genus Hellenocarum H. Wolff (Umbelliferae-apioideae) based on morphology, fruit anatomy, and molecular data

Zakharova, E. A., Kljuykov, E. V., Degtjareva, G. V., Samigullin, T. H., Ukrainskaya, U. A. & Downie, S. R., Jan 1 2016, In : Turkish Journal of Botany. 40, 2, p. 176-193 18 p.

Research output: Contribution to journalArticle

Apiaceae
intergenic DNA
fruits
Carum
herbaria
Asteraceae
Expressed Sequence Tags
Population Genetics
Genetic Markers
Microsatellite Repeats

Pastinaca erzincanensis (Apiaceae), A New Species from Eastern Turkey and Its Phylogenetic Position within Tordylieae

Menemen, Y., Kandemir, A. & Downie, S. R., Nov 2016, In : Annales Botanici Fennici. 53, 5-6, p. 373-382 10 p.

Research output: Contribution to journalArticle

Pastinaca
Apiaceae
Turkey (country)
fruit
new species

The role of the Southern Hemisphere in the evolutionary history of Apiaceae, a mostly north temperate plant family

Calviño, C. I., Teruel, F. E. & Downie, S. R., Feb 1 2016, In : Journal of Biogeography. 43, 2, p. 398-409 12 p.

Research output: Contribution to journalArticle

Apiaceae
Southern Hemisphere
Australasian region
Eurasia
history
2015
Apiales
Plastid Genomes
transfer DNA
Plastids
plastid DNA

Genetic diversity and structure of the noxious alien grass Praxelis clematidea in southern China

Wang, Q., Huang, M., Downie, S. R., Chen, Z. & Chen, Y., Apr 1 2015, In : Biochemical Systematics and Ecology. 59, p. 183-189 7 p.

Research output: Contribution to journalArticle

Genetic Structures
Poaceae
Microsatellite Repeats
genetic structure
genetic variation

Patterns of Genetic Diversity in the Globally Invasive Species Wild Parsnip (Pastinaca sativa)

Jogesh, T., Peery, R., Downie, S. R. & Berenbaum, M. R., Oct 1 2015, In : Invasive Plant Science and Management. 8, 4, p. 415-429 15 p.

Research output: Contribution to journalArticle

Pastinaca sativa
parsnips
invasive species
genetic variation
haplotypes
2014

Identification of species in the angiosperm family Apiaceae using DNA barcodes

Liu, J., Shi, L., Han, J., Li, G., Lu, H., Hou, J., Zhou, X., Meng, F. & Downie, S. R., Nov 1 2014, In : Molecular ecology resources. 14, 6, p. 1231-1238 8 p.

Research output: Contribution to journalArticle

Apiaceae
Angiosperms
DNA barcoding
angiosperm
internal transcribed spacers

Molecular phylogenetics of Pimpinella and allied genera (Apiaceae), with emphasis on Chinese native species, inferred from nrDNA ITS and cpDNA intron sequence data

Wang, Z. X., Downie, S. R., Tan, J. B., Liao, C. Y., Yu, Y. & He, X. J., Oct 1 2014, In : Nordic Journal of Botany. 32, 5, p. 642-657 16 p.

Research output: Contribution to journalArticle

Pimpinella
Apiaceae
chloroplast DNA
native species
introns

Phylogenetic analysis reveals multiple cases of morphological parallelism and taxonomic polyphyly in lomatium (Apiaceae)

George, E. E., Mansfield, D. H., Smith, J. F., Hartman, R. L., Downie, S. R. & Hinchliff, C. E., May 2014, In : Systematic Botany. 39, 2, p. 662-675 14 p.

Research output: Contribution to journalArticle

Cymopterus
Lomatium
Apiaceae
polyphyly
Phylogeny

Recurrent short-distance dispersal explains wide distributions of hydrophytic umbellifers (Apiaceae tribe Oenantheae)

Spalik, K., Banasiak, L., Feist, M. A. E. & Downie, S. R., Aug 2014, In : Journal of Biogeography. 41, 8, p. 1559-1571 13 p.

Research output: Contribution to journalArticle

Apiaceae
Eurasia
aquatic plants
Hawaii
Peucedanum
2013

Dispersal patterns in space and time: A case study of apiaceae subfamily apioideae

Banasiak, Ł., Piwczyński, M., Uliński, T., Downie, S. R., Watson, M. F., Shakya, B. & Spalik, K., Jul 1 2013, In : Journal of Biogeography. 40, 7, p. 1324-1335 12 p.

Research output: Contribution to journalArticle

Apiaceae
Eurasia
Neotropical Kingdom
space and time
case studies

Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.)

Ming, R., VanBuren, R., Liu, Y., Yang, M., Han, Y., Li, L. T., Zhang, Q., Kim, M. J., Schatz, M. C., Campbell, M., Li, J., Bowers, J. E., Tang, H., Lyons, E., Ferguson, A. A., Narzisi, G., Nelson, D. R., Blaby-Haas, C. E., Gschwend, A. R., Jiao, Y. & 51 others, Der, J. P., Zeng, F., Han, J., Min, X. J., Hudson, K. A., Singh, R., Grennan, A. K., Karpowicz, S. J., Watling, J. R., Ito, K., Robinson, S. A., Hudson, M. E., Yu, Q., Mockler, T. C., Carroll, A., Zheng, Y., Sunkar, R., Jia, R., Chen, N., Arro, J., Wai, C. M., Wafula, E., Spence, A., Han, Y., Xu, L., Zhang, J., Peery, R., Haus, M. J., Xiong, W., Walsh, J. A., Wu, J., Wang, M. L., Zhu, Y. J., Paull, R. E., Britt, A. B., Du, C., Downie, S. R., Schuler, M. A., Michael, T. P., Long, S. P., Ort, D. R., William Schopf, J., Gang, D. R., Jiang, N., Yandell, M., dePamphilis, C. W., Merchant, S. S., Paterson, A. H., Buchanan, B. B., Li, S. & Shen-Miller, J., May 10 2013, In : Genome biology. 14, 5, R41.

Research output: Contribution to journalArticle

Nelumbo
Nelumbo nucifera
Lotus
genome
Genome

New insights into the phylogeny of angelica and its allies (apiaceae) with emphasis on east Asian species, inferred from nrDNA, cpDNA, and morphological evidence

Liao, C., Downie, S. R., Li, Q., Yu, Y., He, X. & Zhou, B., Feb 1 2013, In : Systematic Botany. 38, 1, p. 266-281 16 p.

Research output: Contribution to journalArticle

Angelica
Apiaceae
Phylogeny
chloroplast DNA
phylogeny

Siculosciadium, a new monotypic genus of Apiaceae from Sicily

Brullo, C., Brullo, S., Downie, S. R., Danderson, C. A. & Del Galdo, G. G., Jul 1 2013, In : Annals of the Missouri Botanical Garden. 99, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

Apiaceae
Sicily
new genus
Peucedanum
phylogenetics
2012

Historical biogeography of the Angelica group (Apiaceae tribe Selineae) inferred from analyses of nrDNA and cpDNA sequences

Liao, C. Y., Downie, S. R., Yu, Y. & He, X. J., May 2012, In : Journal of Systematics and Evolution. 50, 3, p. 206-217 12 p.

Research output: Contribution to journalArticle

Angelica
Apiaceae
chloroplast DNA
biogeography
Miocene
Oxypolis
Ptilimnium
leaf morphology
Apiaceae
intergenic DNA
2011

A phylogenetic and biogeographic study of the genus Lilaeopsis (Apiaceae Tribe Oenantheae)

Bone, T. S., Downie, S. R., Affolter, J. M. & Spalik, K., Jul 1 2011, In : Systematic Botany. 36, 3, p. 789-805 17 p.

Research output: Contribution to journalArticle

Lilaeopsis
Apiaceae
South America
phylogenetics
North America

Phylogeny and biogeography of Chinese Heracleum (Apiaceae tribe Tordylieae) with comments on their fruit morphology

Yu, Y., Downie, S. R., He, X., Deng, X. & Yan, L., Oct 1 2011, In : Plant Systematics and Evolution. 296, 3-4, p. 179-203 25 p.

Research output: Contribution to journalArticle

Heracleum
Apiaceae
biogeography
phylogeny
fruit
2010

A comparison of nrDNA ITS and ETS loci for phylogenetic inference in the Umbelliferae: An example from tribe Tordylieae

Logacheva, M. D., Valiejo-Roman, C. M., Degtjareva, G. V., Stratton, J. M., Downie, S. R., Samigullin, T. H. & Pimenov, M. G., Oct 1 2010, In : Molecular Phylogenetics and Evolution. 57, 1, p. 471-476 6 p.

Research output: Contribution to journalArticle

Apiaceae
Ribosomal DNA
ribosomal DNA
internal transcribed spacers
phylogenetics

Amphitropic amphiantarctic disjunctions in Apiaceae subfamily Apioideae

Spalik, K., Piwczyński, M., Danderson, C. A., Kurzyna-Młynik, R., Bone, T. S. & Downie, S. R., Oct 1 2010, In : Journal of Biogeography. 37, 10, p. 1977-1994 18 p.

Research output: Contribution to journalArticle

Lilaeopsis
Chaerophyllum
Apium
Daucus
Apiaceae

A taxonomic revision of the South African endemic genus Dasispermum (Apiaceae, Apioideae)

Magee, A. R., Van Wyk, B. E., Tilney, P. M. & Downie, S. R., Apr 1 2010, In : South African Journal of Botany. 76, 2, p. 308-323 16 p.

Research output: Contribution to journalArticle

Apiaceae
taxonomic revisions
fruits
leaves
bracts

New tribal delimitations for the early diverging lineages of Apiaceae subfamily Apioideae

Magee, A. R., Calviño, C. I., Liu, M. R., Downie, S. R., Tilney, P. M. & van Wyk, B. E., Apr 1 2010, In : Taxon. 59, 2, p. 567-580 14 p.

Research output: Contribution to journalArticle

Apiaceae
crystals
mesocarp
crystal
phylogenetics
Apiaceae
phylogenetics
phylogeny
taxonomy
cladistics

Phylogenetic position of African and Malagasy Pimpinella species and related genera (Apiaceae, Pimpinelleae)

Magee, A. R., van Wyk, B. E., Tilney, P. M. & Downie, S. R., Sep 1 2010, In : Plant Systematics and Evolution. 288, 3-4, p. 201-211 11 p.

Research output: Contribution to journalArticle

Pimpinella
Apiaceae
phylogenetics
phylogeny
corolla
2009

A taxonomic revision of Capnophyllum (Apiaceae: Apioideae)

Magee, A. R., van Wyk, B. E., Tilney, P. M. & Downie, S. R., Apr 1 2009, In : South African Journal of Botany. 75, 2, p. 283-291 9 p.

Research output: Contribution to journalArticle

Capnophyllum
Apiaceae
taxonomic revisions
fruits
ribs

Billburttia, a new genus of Apiaceae (tribe Apieae) endemic to Madagascar

Magee, A. R., van Wyk, B. E., Tilney, P. M., Sales, F., Hedge, I. & Downie, S. R., Oct 13 2009, In : Plant Systematics and Evolution. 283, 3, p. 237-245 9 p.

Research output: Contribution to journalArticle

Peucedanum
Apiaceae
Madagascar
new genus
fruit
Capnophyllum
Apiaceae
new genus
Fruit
Habits

Generic delimitations within the Sium alliance (Apiaceae tribe Oenantheae) inferred from cpDNA rps16-5′trnK (UUU) and nrDNA ITS sequences

Spalik, K., Downie, S. R. & Watson, M. F., Aug 1 2009, In : Taxon. 58, 3, p. 735-748 14 p.

Research output: Contribution to journalArticle

Sium
Apium
Apiaceae
Berula
chloroplast DNA

Molecular systematics of angelica and allied genera (apiaceae) from the hengduan mountains of China based on nrDNA ITS sequences: Phylogenetic affinities and biogeographic implications

Feng, T., Downie, S. R., Yu, Y., Zhang, X., Chen, W., He, X. & Liu, S., Jul 1 2009, In : Journal of Plant Research. 122, 4, p. 403-414 12 p.

Research output: Contribution to journalArticle

Angelica
molecular systematics
Apiaceae
mountains
China

Phylogenetic relationships in the genus Lichtensteinia (Apiaceae) based on morphological, anatomical and DNA sequence data

Tilney, P. M., Van Wyk, B. E., Downie, S. R. & Calviño, C. I., Jan 1 2009, In : South African Journal of Botany. 75, 1, p. 64-82 19 p.

Research output: Contribution to journalArticle

Apiaceae
nucleotide sequences
phylogeny
disease diagnosis
chloroplast DNA

Pseudoridolfia, nouveau genre d'Apiaceae découvert au Maroc

Reduron, J. P., Mathez, J., Downie, S. R., Danderson, C. A. & Ostroumova, T., Jan 1 2009, In : Acta Botanica Gallica. 156, 3, p. 487-500 14 p.

Research output: Contribution to journalArticle

Apiaceae
Anethum
Ridolfia
Foeniculum
molecular systematics
Apiaceae
Phylogeny
chloroplast DNA
Introns
introns
2008

A molecular phylogeny of Chinese Apiaceae subfamily Apioideae inferred from nuclear ribosomal DNA internal transcribed spacer sequences

Zhou, J., Peng, H., Downie, S. R., Liu, Z. W. & Gong, X., May 1 2008, In : Taxon. 57, 2, p. 402-416 15 p.

Research output: Contribution to journalArticle

Hansenia
Apiaceae
ribosomal DNA
internal transcribed spacers
Changium

A multivariate analysis of Pteryxia terebinthina (Apiaceae)

Sun, F. J., Levin, G. A. & Downie, S. R., Jan 1 2008, In : Journal of the Torrey Botanical Society. 135, 1, p. 81-93 13 p.

Research output: Contribution to journalArticle

Cymopterus
Apiaceae
species complex
discriminant analysis
multivariate analysis

A new generic classification for African peucedanoid species (Apiaceae)

Winter, P. J. D., Magee, A. R., Phephu, N., Tilney, P. M., Downie, S. R. & Van Wyk, B. E., May 1 2008, In : Taxon. 57, 2, p. 347-364 18 p.

Research output: Contribution to journalArticle

Peucedanum
Apiaceae
taxonomy
herb
herbs

A phylogenetic study of Oxypolis and Ptilimnium (Apiaceae) based on nuclear rDNA ITS sequences

Feist, M. A. E. & Downie, S. R., Apr 2008, In : Systematic Botany. 33, 2, p. 447-458 12 p.

Research output: Contribution to journalArticle

Oxypolis
Ptilimnium
Apiaceae
Bayes Theorem
North America

Ezosciadium (Apiaceae): A taxonomic revision of yet another early diverging South African apioid genus

Magee, A. R., Van Wyk, B. E., Tilney, P. M. & Downie, S. R., Dec 1 2008, In : Plant Systematics and Evolution. 276, 3-4, p. 167-175 9 p.

Research output: Contribution to journalArticle

Apiaceae
taxonomic revisions
stamens
ribs
corolla

Morphology and biogeography of Apiaceae subfamily Saniculoideae as inferred by phylogenetic analysis of molecular data

Calviño, C. I., Martínez, S. G. & Downie, S. R., Feb 1 2008, In : American journal of botany. 95, 2, p. 196-214 19 p.

Research output: Contribution to journalArticle

Sanicula
Eryngium
Apiaceae
biogeography
Chloroplast DNA

Phylogenetic analysis of nrDNA ITS sequences reveals relationships within five groups of Iranian Apiaceae subfamily Apioideae

Ajani, Y., Ajani, A., Cordes, J. M., Watson, M. F. & Downie, S. R., May 1 2008, In : Taxon. 57, 2, p. 383-401 19 p.

Research output: Contribution to journalArticle

Opopanax
Ferula
Dorema
Apiaceae
Prangos

Phylogenetic position of the genus Ferula (Apiaceae) and its placement in tribe Scandiceae as inferred from nrDNA ITS sequence variation

Kurzyna-Młynik, R., Oskolski, A. A., Downie, S. R., Kopacz, R., Wojewódzka, A. & Spalik, K., Aug 1 2008, In : Plant Systematics and Evolution. 274, 1-2, p. 47-66 20 p.

Research output: Contribution to journalArticle

Ferula
Apiaceae
phylogenetics
phylogeny
Dorema