Saurabh Sinha

Director, Mayo Clinic & Illinois Alliance for Technology-based Healthcare

20002018

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Research Output 2000 2018

A closer look at cross-validation for assessing the accuracy of gene regulatory networks and models

Tabe-Bordbar, S., Emad, A., Zhao, S. D. & Sinha, S. Dec 1 2018 In : Scientific Reports. 8, 1, 6620

Research output: Contribution to journalArticle

Gene expression
Genes
Supervised learning
Simulated annealing
Genomics

A novel method for predicting activity of cis-regulatory modules, based on a diverse training set

Yang, W. & Sinha, S. Jan 1 2017 In : Bioinformatics. 33, 1, p. 1-7 7 p.

Research output: Contribution to journalArticle

Module
Transcription factors
Transcription Factors
Genome
Technology

Behavioral, transcriptomic and epigenetic responses to social challenge in honey bees

Shpigler, H. Y., Saul, M. C., Murdoch, E. E., Cash-Ahmed, A. C., Seward, C. H., Sloofman, L., Chandrasekaran, S., Sinha, S., Stubbs, L. J. & Robinson, G. E. Jul 1 2017 In : Genes, Brain and Behavior. 16, 6, p. 579-591 13 p.

Research output: Contribution to journalArticle

Honey
Bees
Epigenomics
Mushroom Bodies
Transcription Factors

Knowledge-guided gene prioritization reveals new insights into the mechanisms of chemoresistance

Emad, A., Cairns, J., Kalari, K. R., Wang, L. & Sinha, S. Aug 11 2017 In : Genome biology. 18, 1, 153

Research output: Contribution to journalArticle

prioritization
drug
gene
drugs
Genes

Quantitative Measurement and Thermodynamic Modeling of Fused Enhancers Support a Two-Tiered Mechanism for Interpreting Regulatory DNA

Samee, M. A. H., Lydiard-Martin, T., Biette, K. M., Vincent, B. J., Bragdon, M. D., Eckenrode, K. B., Wunderlich, Z., Estrada, J., Sinha, S. & DePace, A. H. Oct 3 2017 In : Cell Reports. 21, 1, p. 236-245 10 p.

Research output: Contribution to journalArticle

Thermodynamics
Transcription Factors
DNA
Blastoderm
Ports and harbors