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2017

Asymmetric Lee Distance Codes for DNA-Based Storage

Gabrys, R., Kiah, H. M. & Milenkovic, O., Aug 2017, In : IEEE Transactions on Information Theory. 63, 8, p. 4982-4995 14 p., 7918539.

Research output: Contribution to journalArticle

Computing similarity distances between rankings

Farnoud (Hassanzadeh), F., Milenkovic, O., Puleo, G. J. & Su, L., Dec 11 2017, In : Discrete Applied Mathematics. 232, p. 157-175 19 p.

Research output: Contribution to journalArticle

Latent Network Features and Overlapping Community Discovery via Boolean Intersection Representations

Dau, H. & Milenkovic, O., Oct 2017, In : IEEE/ACM Transactions on Networking. 25, 5, p. 3219-3234 16 p., 8004484.

Research output: Contribution to journalArticle

Portable and Error-Free DNA-Based Data Storage

Hossein TabatabaeiYazdi, S. M., Gabrys, R. & Milenkovic, O., Dec 1 2017, In : Scientific reports. 7, 1, 5011.

Research output: Contribution to journalArticle

2018

ChIPWig: A random access-enabling lossless and lossy compression method for ChIP-seq data

Ravanmehr, V., Kim, M., Wang, Z. & Milenkovic, O., Mar 15 2018, In : Bioinformatics. 34, 6, p. 911-919 9 p.

Research output: Contribution to journalArticle

Codes in the Damerau Distance for Deletion and Adjacent Transposition Correction

Gabrys, R., Yaakobi, E. & Milenkovic, O., Apr 2018, In : IEEE Transactions on Information Theory. 64, 4, p. 2550-2570 21 p.

Research output: Contribution to journalArticle

Correlation Clustering and Biclustering with Locally Bounded Errors

Puleo, G. J. & Milenkovic, O., Jun 2018, In : IEEE Transactions on Information Theory. 64, 6, p. 4105-4119 15 p.

Research output: Contribution to journalArticle

Exabytes in a Test Tube: With the right coding, DNA could archive our entire civilization

Milenkovic, O., Gabrys, R., Kiah, H. M. & Yazdi, S. M. H. T., May 2018, In : IEEE Spectrum. 55, 5, p. 40-45 6 p.

Research output: Contribution to journalArticle

Maxminsum steiner systems for access balancing in distributed storage

Dau, H. & Milenkovic, O., Jan 1 2018, In : SIAM Journal on Discrete Mathematics. 32, 3, p. 1644-1671 28 p.

Research output: Contribution to journalArticle

METHCOMP: A special purpose compression platform for DNA methylation data

Peng, J., Milenkovic, O. & Ochoa, I., 2018, In : Bioinformatics. 34, 15, p. 2654-2656 3 p.

Research output: Contribution to journalArticle

Mutually uncorrelated primers for DNA-based data storage

Tabatabaei Yazdi, S. M. H., Kiah, H. M., Gabrys, R. & Milenkovic, O., Sep 2018, In : IEEE Transactions on Information Theory. 64, 9, p. 6283-6296 14 p., 8255669.

Research output: Contribution to journalArticle

Paired threshold graphs

Ravanmehr, V., Puleo, G. J., Bolouki, S. & Milenković, O., Dec 11 2018, In : Discrete Applied Mathematics. 250, p. 291-308 18 p.

Research output: Contribution to journalArticle

Repairing Reed-Solomon Codes With Multiple Erasures

Dau, H., Duursma, I. M., Kiah, H. M. & Milenkovic, O., Oct 2018, In : IEEE Transactions on Information Theory. 64, 10, p. 6567-6582 16 p., 8340062.

Research output: Contribution to journalArticle

2019

Detecting topological variations of DNA at single-molecule level

Liu, K., Pan, C., Kuhn, A., Nievergelt, A. P., Fantner, G. E., Milenkovic, O. & Radenovic, A., Dec 1 2019, In : Nature communications. 10, 1, 3.

Research output: Contribution to journalArticle

Explicit formulas for the weight enumerators of some classes of deletion correcting codes

Bibak, K. & Milenkovic, O., Mar 2019, In : IEEE Transactions on Communications. 67, 3, p. 1809-1816 8 p., 8573841.

Research output: Contribution to journalArticle

On the triangle clique cover and Kt clique cover problems

Dau, H., Milenkovic, O. & Puleo, G. J., 2019, (Accepted/In press) In : Discrete Mathematics. 111627.

Research output: Contribution to journalArticle

Unique Reconstruction of Coded Strings from Multiset Substring Spectra

Gabrys, R. & Milenkovic, O., Dec 2019, In : IEEE Transactions on Information Theory. 65, 12, p. 7682-7696 15 p., 8805120.

Research output: Contribution to journalArticle

2020

DNA punch cards for storing data on native DNA sequences via enzymatic nicking

Tabatabaei, S. K., Wang, B., Athreya, N. B. M., Enghiad, B., Hernandez, A. G., Fields, C. J., Leburton, J. P., Soloveichik, D., Zhao, H. & Milenkovic, O., Dec 1 2020, In : Nature communications. 11, 1, 1742.

Research output: Contribution to journalArticle

Open Access
Open Access

Motif and Hypergraph Correlation Clustering

Li, P., Puleo, G. J. & Milenkovic, O., May 2020, In : IEEE Transactions on Information Theory. 66, 5, p. 3065-3078 14 p., 8830473.

Research output: Contribution to journalArticle

Open Access