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Research Output

  • 20 Article
  • 7 Conference contribution
  • 1 Conference article
  • 1 Working paper
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Conference contribution
2018

On the non-uniqueness of solutions to the perfect phylogeny mixture problem

Pradhan, D. & El-Kebir, M., Jan 1 2018, Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Proceedings. Ouangraoua, A. & Blanchette, M. (eds.). Springer-Verlag Berlin Heidelberg, p. 277-293 17 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11183 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Parsimonious migration history problem: Complexity and algorithms

El-Kebir, M., Aug 1 2018, 18th International Workshop on Algorithms in Bioinformatics, WABI 2018. Parida, L. & Ukkonen, E. (eds.). Schloss Dagstuhl- Leibniz-Zentrum fur Informatik GmbH, Dagstuhl Publishing, 24. (Leibniz International Proceedings in Informatics, LIPIcs; vol. 113).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

The copy-number tree mixture deconvolution problem and applications to multi-sample bulk sequencing tumor data

Zaccaria, S., El-Kebir, M., Klau, G. W. & Raphael, B. J., Jan 1 2017, Research in Computational Molecular Biology - 21st Annual International Conference, RECOMB 2017, Proceedings. Sahinalp, S. C. (ed.). Springer-Verlag Berlin Heidelberg, p. 318-335 18 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10229 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

Copy-number evolution problems: Complexity and algorithms

El-Kebir, M., Raphael, B. J., Shamir, R., Sharan, R., Zaccaria, S., Zehavi, M. & Zeira, R., Jan 1 2016, Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Proceedings. Frith, M. & Pedersen, C. N. S. (eds.). Springer-Verlag, p. 137-149 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9838 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2012

Charge group partitioning in biomolecular simulation

Canzar, S., El-Kebir, M., Pool, R., Elbassioni, K., Malde, A. K., Mark, A. E., Geerke, D. P., Stougie, L. & Klau, G. W., May 15 2012, Research in Computational Molecular Biology - 16th Annual International Conference, RECOMB 2012, Proceedings. p. 29-43 15 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7262 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

A mathematical programming approach to marker-assisted gene pyramiding

Canzar, S. & El-Kebir, M., Sep 26 2011, Algorithms in Bioinformatics - 11th International Workshop, WABI 2011, Proceedings. p. 26-38 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 6833 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lagrangian relaxation applied to sparse global network alignment

El-Kebir, M., Heringa, J. & Klau, G. W., Nov 9 2011, Pattern Recognition in Bioinformatics - 6th IAPR International Conference, PRIB 2011, Proceedings. p. 225-236 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7036 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution