Research Output 2002 2017

2017

A dynamic regression analysis tool for quantitative assessment of bacterial growth written in Python

Hoeflinger, J. L., Hoeflinger, D. E. & Miller, M. J. Jan 1 2017 In : Journal of Microbiological Methods. 132, p. 83-85 3 p.

Research output: Contribution to journalArticle

Boidae
Regression Analysis
Lactobacillus
Carbohydrates
Metabolic Engineering
Butanols
Clostridium
ethanol
Ethanol

Hot topic: Antilisterial activity by endolysin PlyP100 in fresh cheese

Van Tassell, M. L., Ibarra-Sánchez, L. A., Hoepker, G. P. & Miller, M. J. Apr 1 2017 In : Journal of Dairy Science. 100, 4, p. 2482-2487 6 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
Food
Bacteriophages
Listeria

Invited review: Hispanic-style cheeses and their association with Listeria monocytogenes

Ibarra-Sánchez, L. A., Van Tassell, M. L. & Miller, M. J. Apr 1 2017 In : Journal of Dairy Science. 100, 4, p. 2421-2432 12 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
Hispanic Americans
Pasteurization
Refrigeration

Molecular weight distribution and fermentation of mechanically pre-treated konjac enzymatic hydrolysates

Yang, J., Vittori, N., Wang, W., Shi, Y. C., Hoeflinger, J. L., Miller, M. J. & Pan, Y. Mar 1 2017 In : Carbohydrate Polymers. 159, p. 58-65 8 p.

Research output: Contribution to journalArticle

Molecular weight
Fermentation
Fermenters
Depolymerization
Enzymatic hydrolysis
2016

Creative lysins: Listeria and the engineering of antimicrobial enzymes

Van Tassell, M. L., Angela Daum, M., Kim, J. S. & Miller, M. J. Feb 1 2016 In : Current Opinion in Biotechnology. 37, p. 88-96 9 p.

Research output: Contribution to journalReview article

Biotechnology
Enzymes
Proteins
Spoilage
Listeria
Campylobacter jejuni
Lactobacillus
Intestines
Chickens
Genome

Prebiotics and bioactive milk fractions affect gut development, microbiota, and neurotransmitter expression in piglets

Berding, K., Wang, M., Monaco, M. H., Alexander, L. S., Mudd, A. T., Chichlowski, M., Waworuntu, R. V., Berg, B. M., Miller, M. J., Dilger, R. N. & Donovan, S. M. 2016 In : Journal of Pediatric Gastroenterology and Nutrition. 63, 6, p. 688-697 10 p.

Research output: Contribution to journalArticle

Prebiotics
Microbiota
Neurotransmitter Agents
Milk
Diet
2015

Characterization of the intestinal lactobacilli community following galactooligosaccharides and polydextrose supplementation in the neonatal piglet

Hoeflinger, J. L., Kashtanov, D. O., Cox, S. B., Dowd, S. E., Jouni, Z. E., Donovan, S. M. & Miller, M. J. Aug 14 2015 In : PLoS One. 10, 8, e0135494

Research output: Contribution to journalArticle

Lactobacillus
Microbiota
Prebiotics
Ruminococcus
Infant Formula

Galacto-oligosaccharides may directly enhance intestinal barrier function through the modulation of goblet cells

Bhatia, S., Prabhu, P. N., Benefiel, A. C., Miller, M. J., Chow, J., Davis, S. R. & Gaskins, H. R. Mar 1 2015 In : Molecular Nutrition and Food Research. 59, 3, p. 566-573 8 p.

Research output: Contribution to journalArticle

Goblet Cells
Oligosaccharides
Resistin
Lotus
Sulfotransferases

In vitro impact of human milk oligosaccharides on Enterobacteriaceae growth

Hoeflinger, J. L., Davis, S. R., Chow, J. & Miller, M. J. Apr 1 2015 In : Journal of Agricultural and Food Chemistry. 63, 12, p. 3295-3302 8 p.

Research output: Contribution to journalArticle

Human Milk
Enterobacteriaceae
Oligosaccharides
In Vitro Techniques
Premature Infants

Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants

Lewis, Z. T., Totten, S. M., Smilowitz, J. T., Popovic, M., Parker, E., Lemay, D. G., Van Tassell, M. L., Miller, M. J., Jin, Y. S., German, J. B., Lebrilla, C. B. & Mills, D. A. Apr 10 2015 In : Microbiome. 3, 1, 13

Research output: Contribution to journalArticle

Fucosyltransferases
Bifidobacterium
Oligosaccharides
Feces
Milk

Myrosinase-dependent and –independent formation and control of isothiocyanate products of glucosinolate hydrolysis

Angelino, D., Dosz, E. B., Sun, J., Hoeflinger, J. L., Van Tassell, M. L., Chen, P., Harnly, J. M., Miller, M. J. & Jeffery, E. H. Oct 6 2015 In : Frontiers in Plant Science. 6, OCTOBER, 831

Research output: Contribution to journalArticle

Isothiocyanates
Glucosinolates
Hydrolysis
Vegetables
Health

Use of a miniature laboratory fresh cheese model for investigating antimicrobial activities

Van Tassell, M. L., Ibarra-Sánchez, L. A., Takhar, S. R., Amaya-Llano, S. L. & Miller, M. J. Dec 1 2015 In : Journal of Dairy Science. 98, 12, p. 8515-8524 10 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
Acids
Nisin
Listeria
2014

A piglet model for studying Candida albicans colonization of the human oro-gastrointestinal tract

Hoeflinger, J. L., Coleman, D. A., Oh, S. H., Miller, M. J. & Hoyer, L. L. 2014 In : FEMS Microbiology Letters. 357, 1, p. 10-15 6 p.

Research output: Contribution to journalArticle

Candida albicans
Gastrointestinal Tract
Swine
Microbiota
Esophagus

Glycan-specific whole cell affinity chromatography: A versatile microbial adhesion platform

Van Tassell, M. L., Price, N. P. J. & Miller, M. J. 2014 In : MethodsX. 1, p. 244-250 7 p.

Research output: Contribution to journalArticle

Affinity Chromatography
Polysaccharides
Microbial Interactions
Culture Techniques
Cell Communication

Human milk oligosaccharides shorten rotavirus-induced diarrhea and modulate piglet mucosal immunity and colonic microbiota

Li, M., Monaco, M. H., Wang, M., Comstock, S. S., Kuhlenschmidt, T. B., Fahey, G. C., Miller, M. J., Kuhlenschmidt, M. S. & Donovan, S. M. 2014 In : ISME Journal. 8, 8, p. 1609-1620 12 p.

Research output: Contribution to journalArticle

Mucosal Immunity
Rotavirus
Microbiota
Human Milk
Oligosaccharides
2013

Methylphenidate prevents high-fat diet (HFD)-induced learning/memory impairment in juvenile mice

Kaczmarczyk, M. M., Machaj, A. S., Chiu, G. S., Lawson, M. A., Gainey, S. J., York, J. M., Meling, D. D., Martin, S. A., Kwakwa, K. A., Newman, A. F., Woods, J. A., Kelley, K. W., Wang, Y., Miller, M. J. & Freund, G. G. Sep 2013 In : Psychoneuroendocrinology. 38, 9, p. 1553-1564 12 p.

Research output: Contribution to journalArticle

Methylphenidate
High Fat Diet
Learning
Anxiety
Overnutrition
Campylobacter
Salmonella
Industry
Foodborne Diseases
Toxoplasma

Short communication: Phenotypic and genetic diversity of wild lactococcus lactis isolated from traditional pecorino cheeses of tuscany

Turchi, B., Van Tassell, M. L., Lee, A., Nuvoloni, R., Cerri, D. & Miller, M. J. Jun 2013 In : Journal of Dairy Science. 96, 6, p. 3558-3563 6 p.

Research output: Contribution to journalArticle

Lactococcus
Multilocus Sequence Typing
Cheese
Salt-Tolerance
Lactococcus lactis
2012

Characterization of a Panela cheese with added probiotics and fava bean starch

Escobar, M. C., Van Tassell, M. L., Martínez-Bustos, F., Singh, M., Castaño-Tostado, E., Amaya-Llano, S. L. & Miller, M. J. Jun 2012 In : Journal of Dairy Science. 95, 6, p. 2779-2787 9 p.

Research output: Contribution to journalArticle

Vicia faba
Probiotics
Cheese
Starch
Lactobacillus rhamnosus

Consumption of different soymilk formulations differentially affects the gut microbiomes of overweight and obese men

Fernandez-Raudales, D., Hoeflinger, J. L., Bringe, N. A., Cox, S. B., Dowd, S. E., Miller, M. J. & de Mejia, E. G. Nov 2012 In : Gut Microbes. 3, 6, p. 490-500 11 p.

Research output: Contribution to journalArticle

Microbiota
Prevotella
Bacteroidetes
Lactobacillus
Bacteroides

Development of a Lactobacillus specific T-RFLP method to determine lactobacilli diversity in complex samples

Chen, L., Teasdale, M. T., Kaczmarczyk, M. M., Freund, G. G. & Miller, M. J. Nov 2012 In : Journal of Microbiological Methods. 91, 2, p. 262-268 7 p.

Research output: Contribution to journalArticle

Lactobacillus
Restriction Fragment Length Polymorphisms
DNA Restriction Enzymes
Dietary Supplements
Ribosomal DNA

Identification of lactose phosphotransferase systems in Lactobacillus gasseri ATCC 33323 required for lactose utilization

Francl, A. L., Hoeflinger, J. L. & Miller, M. J. Apr 2012 In : Microbiology. 158, 4, p. 944-952 9 p.

Research output: Contribution to journalArticle

Lactobacillus
Lactose
Phosphotransferases
Genes
Genome
Dietary Fiber
Insurance Benefits
Gastrointestinal Tract
Food
Eating

Whole cell biosynthesis of a functional oligosaccharide, 2' -fucosyllactose, using engineered Escherichia coli

Lee, W. H., Pathanibul, P., Quarterman, J., Jo, J. H., Han, N. S., Miller, M. J., Jin, Y. S. & Seo, J. H. Apr 30 2012 In : Microbial Cell Factories. p. 48 1 p.

Research output: Contribution to journalArticle

Lactose
Oligosaccharides
Escherichia coli
Fermentation
Fucose
2011

Addition of polydextrose and galactooligosaccharide to formula does not affect bacterial translocation in the neonatal piglet

Monaco, M. H., Kashtanov, D. O., Wang, M., Walker, D. C., Rai, D., Jouni, Z. E., Miller, M. J. & Donovan, S. M. Feb 2011 In : Journal of Pediatric Gastroenterology and Nutrition. 52, 2, p. 210-216 7 p.

Research output: Contribution to journalArticle

Bacterial Translocation
Enteral Nutrition
Total Parenteral Nutrition
Lymph Nodes
Ribosomal DNA

Assessment of Lactobacillus gasseri as a candidate oral vaccine vector

Stoeker, L., Nordone, S., Gunderson, S., Zhang, L., Kajikawa, A., LaVoy, A., Miller, M., Klaenhammer, T. R. & Dean, G. A. Nov 2011 In : Clinical and Vaccine Immunology. 18, 11, p. 1834-1844 11 p.

Research output: Contribution to journalArticle

Lactobacillus
Vaccines
Flagellin
Bacterial Genes
Mucosal Immunity

Construction of vectors for inducible and constitutive gene expression in Lactobacillus

Duong, T., Miller, M. J., Barrangou, R., Azcarate-Peril, M. A. & Klaenhammer, T. R. May 2011 In : Microbial Biotechnology. 4, 3, p. 357-367 11 p.

Research output: Contribution to journalArticle

Lactobacillus acidophilus
Oxalates
Lactobacillus
Operon
Carbohydrates

Lactobacillus adhesion to mucus

van Tassell, M. L. & Miller, M. J. May 2011 In : Nutrients. 3, 5, p. 613-636 24 p.

Research output: Contribution to journalReview article

Lactobacillus
Mucus
Probiotics
Mucins
Gastrointestinal Tract
2010

Drivers of liking for yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y. May 2010 In : Journal of Food Science. 75, 4

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
Chicory
Inulin

Glucoraphanin hydrolysis by microbiota in the rat cecum results in sulforaphane absorption

Lai, R. H., Miller, M. J. & Jeffery, E. Nov 2010 In : Food and Function. 1, 2, p. 161-166 6 p.

Research output: Contribution to journalArticle

Cecum
Microbiota
Hydrolysis
Isothiocyanates
Enzymes

Sensory and microbiological quality of yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y. Oct 2010 In : Journal of Dairy Science. 93, 10, p. 4471-4479 9 p.

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
Inulin
Principal Component Analysis

The PTS transporters of Lactobacillus gasseri ATCC 33323

Francl, A. L., Thongaram, T. & Miller, M. J. 2010 In : BMC Microbiology. 10, 77

Research output: Contribution to journalArticle

Lactobacillus
Phosphotransferases
Carbohydrates
Cellobiose
Mannose
2008

Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism

Azcarate-Peril, M. A., Altermann, E., Yong, J. G., Tallon, R., Sanozky-Dawes, R. B., Pfeiler, E. A., O'Flaherty, S., Buck, B. L., Dobson, A., Duong, T., Miller, M. J., Barrangou, R. & Klaenhammer, T. R. Aug 2008 In : Applied and Environmental Microbiology. 74, 15, p. 4610-4625 16 p.

Research output: Contribution to journalArticle

Lactobacillus
Sequence Analysis
Genome
genome
Base Composition

Genome sequence and characteristics of Lrm1, a prophage from industrial Lactobacillus rhamnosus strain M1

Durmaz, E., Miller, M. J., Azcarate-Peril, M. A., Toon, S. P. & Klaenhammer, T. R. Aug 2008 In : Applied and Environmental Microbiology. 74, 15, p. 4601-4609 9 p.

Research output: Contribution to journalArticle

Lactobacillus rhamnosus
Prophages
Bacteriophages
Genome
DNA
2005

Role of cis-acting sites NorL, a TATA box, and AflR1 in nor-1 transcriptiorial activation in Aspergillus parasiticus

Miller, M. J., Roze, L. V., Trail, F. & Linz, J. E. Mar 2005 In : Applied and Environmental Microbiology. 71, 3, p. 1539-1545 7 p.

Research output: Contribution to journalArticle

TATA Box
Aflatoxins
Aspergillus
gene
Transcriptional Activation
2004

A novel cAMP-response element, CRE1, modulates expression of nor-1 in Aspergillus parasiticus

Roze, L. V., Miller, M. J., Rarick, M., Mahanti, N. & Linz, J. E. Jun 25 2004 In : Journal of Biological Chemistry. 279, 26, p. 27428-27439 12 p.

Research output: Contribution to journalArticle

Response Elements
Aspergillus
Salts
Glucose
Peptones
2002

Chromosomal location plays a role in regulation of aflatoxin gene expression in Aspergillus parasiticus

Chiou, C. H., Miller, M., Wilson, D. L., Trail, F. & Linz, J. E. 2002 In : Applied and Environmental Microbiology. 68, 1, p. 306-315 10 p.

Research output: Contribution to journalArticle

Aflatoxins
Glucuronidase
Gene Expression Regulation
Aspergillus
gene