Michael J Miller

20022020
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Research Output 2002 2020

2020

Invited review: Advances in nisin use for preservation of dairy products

Ibarra-Sánchez, L. A., El-Haddad, N., Mahmoud, D., Miller, M. J. & Karam, L., Jan 1 2020, (Accepted/In press) In : Journal of Dairy Science.

Research output: Contribution to journalReview article

Nisin
nisin
Dairy Products
dairy products
anti-infective agents
2019

Broccoli consumption affects the human gastrointestinal microbiota

Kaczmarek, J. L., Liu, X., Charron, C. S., Novotny, J. A., Jeffery, E. H., Seifried, H. E., Ross, S. A., Miller, M. J., Swanson, K. S. & Holscher, H. D., Jan 2019, In : Journal of Nutritional Biochemistry. 63, p. 27-34 8 p.

Research output: Contribution to journalArticle

Brassica
Glucosinolates
Vegetables
Phytochemicals
Nutrition

Co-assembly of nisin and zein in microfluidics for enhanced antilisterial activity in Queso Fresco

Feng, Y., Ibarra-Sánchez, L. A., Luu, L., Miller, M. J. & Lee, Y., Aug 2019, In : LWT. 111, p. 355-362 8 p.

Research output: Contribution to journalArticle

Zein
Nisin
zein
nisin
Microfluidics

Nisin incorporation enhances the inactivation of lactic acid bacteria during the acid wash step of bioethanol production from sugarcane juice

Zhang, L., Holle, M. J., Kim, J. S., Daum, M. A. & Miller, M. J., Jul 2019, In : Letters in Applied Microbiology. 69, 1, p. 50-56 7 p.

Research output: Contribution to journalArticle

Nisin
Saccharum
Lactic Acid
Bacteria
Acids
2018

Antimicrobial behavior of phage endolysin PlyP100 and its synergy with nisin to control Listeria monocytogenes in Queso Fresco

Ibarra-Sánchez, L. A., Van Tassell, M. L. & Miller, M. J., Jun 2018, In : Food Microbiology. 72, p. 128-134 7 p.

Research output: Contribution to journalArticle

endolysin
Nisin
nisin
Listeria monocytogenes
bacteriophages

Catechin supplemented in a FOS diet induces weight loss by altering cecal microbiota and gene expression of colonic epithelial cells

Luo, J., Han, L., Liu, L., Gao, L., Xue, B., Wang, Y., Ou, S., Miller, M. J. & Peng, X., May 2018, In : Food and Function. 9, 5, p. 2962-2969 8 p.

Research output: Contribution to journalArticle

Reducing Diet
fructooligosaccharides
Catechin
Microbiota
catechin

Dietary bovine Lactoferrin reduces Staphylococcus aureus in the tissues and modulates the immune response in piglets systemically infected with S. aureus

Reznikov, E. A., Comstock, S. S., Hoeflinger, J. L., Wang, M., Miller, M. J. & Donovan, S. M., Apr 1 2018, In : Current Developments in Nutrition. 2, 4, nzy001.

Research output: Contribution to journalArticle

Lactoferrin
lactoferrin
Bifidobacterium longum subsp. infantis
Staphylococcus aureus
piglets

Glutathione Utilization in Lactobacillus fermentum CECT 5716

Surya, A., Liu, X. & Miller, M. J., Dec 5 2018, In : Journal of Agricultural and Food Chemistry. 66, 48, p. 12651-12656 6 p.

Research output: Contribution to journalArticle

Lactobacillus fermentum
Glutathione
glutathione
Glutathione Disulfide
Bacteria

Lightly cooked broccoli is as effective as raw broccoli in mitigating dextran sulfate sodium-induced colitis in mice

Wang, Y., Jeffery, E. H., Miller, M. J., Wallig, M. A. & Wu, Y., Jun 8 2018, In : Nutrients. 10, 6, 748.

Research output: Contribution to journalArticle

Dextran Sulfate
sodium sulfate
Brassica
colitis
dextran

Microbial analysis of commercially available US Queso Fresco

Holle, M. J., Ibarra-Sánchez, L. A., Liu, X., Stasiewicz, M. J. & Miller, M. J., Sep 2018, In : Journal of Dairy Science. 101, 9, p. 7736-7745 10 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
cheeses
salt content
Listeria

Yeast derived lysA2 can control bacterial contamination in ethanol fermentation

Kim, J. S., Daum, M. A., Jin, Y-S. & Miller, M. J., Jun 2018, In : Viruses. 10, 6, 281.

Research output: Contribution to journalArticle

Fermentation
Ethanol
Yeasts
Saccharum
Lactobacillaceae
2017

A dynamic regression analysis tool for quantitative assessment of bacterial growth written in Python

Hoeflinger, J. L., Hoeflinger, D. E. & Miller, M. J., Jan 1 2017, In : Journal of Microbiological Methods. 132, p. 83-85 3 p.

Research output: Contribution to journalArticle

Boidae
Regression Analysis
Lactobacillus
Growth
Carbohydrates

Cronobacter sakazakii ATCC 29544 autoaggregation requires flic flagellation, not motility

Hoeflinger, J. L. & Miller, M. J., Feb 28 2017, In : Frontiers in Microbiology. 8, FEB, 301.

Research output: Contribution to journalArticle

Cronobacter sakazakii
Flagella
Flagellin
Gene Knockout Techniques
Frameshift Mutation
Clostridium saccharoperbutylacetonicum
Metabolic Engineering
Butanols
metabolic engineering
Clostridium

Dietary broccoli alters rat cecal microbiota to improve glucoraphanin hydrolysis to bioactive isothiocyanates

Liu, X., Wang, Y., Hoeflinger, J. L., Neme, B. P., Jeffery, E. H. & Miller, M. J., Mar 10 2017, In : Nutrients. 9, 3, 262.

Research output: Contribution to journalArticle

glucoraphanin
Isothiocyanates
Brassica
Microbiota
isothiocyanates

Draft genome sequence of the murine bacterial isolate Lactobacillus murinus EF-1

Fritz, E. & Miller, M. J., Jan 1 2017, In : Genome Announcements. 5, 12, e00077-17.

Research output: Contribution to journalArticle

Peptide Elongation Factor 1
Lactobacillus
Genome
Prophages
Base Composition

HM2-phage resistant solventogenic Clostridium saccharoperbutylacetonicum N1-4 shows increased exopolysaccharide production

Liu, X., Turchi, B., Mok, K. C., Taga, M. E. & Miller, M. J., Oct 1 2017, In : FEMS microbiology letters. 364, 19, fnx191.

Research output: Contribution to journalLetter

Clostridium
Bacteriophages
Fermentation
Adsorption
Genome Size

Hot topic: Antilisterial activity by endolysin PlyP100 in fresh cheese

Van Tassell, M. L., Ibarra-Sánchez, L. A., Hoepker, G. P. & Miller, M. J., Apr 1 2017, In : Journal of Dairy Science. 100, 4, p. 2482-2487 6 p.

Research output: Contribution to journalArticle

endolysin
fresh cheeses
Cheese
Listeria monocytogenes
bacteriophages

Human milk oligosaccharide consumption by probiotic and human-associated bifidobacteria and lactobacilli

Thongaram, T., Hoeflinger, J. L., Chow, J. M. & Miller, M. J., Oct 2017, In : Journal of Dairy Science. 100, 10, p. 7825-7833 9 p.

Research output: Contribution to journalArticle

Bifidobacterium longum subsp. infantis
Bifidobacterium
Lactobacillus acidophilus
Probiotics
Lactobacillus

Invited review: Hispanic-style cheeses and their association with Listeria monocytogenes

Ibarra-Sánchez, L. A., Van Tassell, M. L. & Miller, M. J., Apr 1 2017, In : Journal of Dairy Science. 100, 4, p. 2421-2432 12 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
Hispanic Americans
cheeses
Pasteurization

Molecular weight distribution and fermentation of mechanically pre-treated konjac enzymatic hydrolysates

Yang, J., Vittori, N., Wang, W., Shi, Y. C., Hoeflinger, J. L., Miller, M. J. & Pan, Y., Mar 1 2017, In : Carbohydrate Polymers. 159, p. 58-65 8 p.

Research output: Contribution to journalArticle

Molecular weight distribution
Fermentation
Molecular weight
Fermenters
Depolymerization

Prebiotic Galactooligosaccharide Metabolism by Probiotic Lactobacilli and Bifidobacteria

Thongaram, T., Hoeflinger, J. L., Chow, J. & Miller, M. J., May 24 2017, In : Journal of Agricultural and Food Chemistry. 65, 20, p. 4184-4192 9 p.

Research output: Contribution to journalArticle

galactooligosaccharides
Lactobacillus acidophilus
Prebiotics
Bifidobacterium
Probiotics
2016

Creative lysins: Listeria and the engineering of antimicrobial enzymes

Van Tassell, M. L., Angela Daum, M., Kim, J. S. & Miller, M. J., Feb 1 2016, In : Current Opinion in Biotechnology. 37, p. 88-96 9 p.

Research output: Contribution to journalReview article

Listeria
Biotechnology
Enzymes
Spoilage
Proteins

Draft genome sequence of Lactobacillus crispatus JCM5810, which can reduce Campylobacter jejuni colonization in chicken intestine

Wooten, J., Liu, X. & Miller, M. J., Jan 1 2016, In : Genome Announcements. 4, 2, e00255-16.

Research output: Contribution to journalArticle

Campylobacter jejuni
Intestines
Chickens
Genome
Probiotics

Prebiotics and bioactive milk fractions affect gut development, microbiota, and neurotransmitter expression in piglets

Berding, K., Wang, M., Monaco, M. H., Alexander, L. S., Mudd, A. T., Chichlowski, M., Waworuntu, R. V., Berg, B. M., Miller, M. J., Dilger, R. N. & Donovan, S. M., Jan 1 2016, In : Journal of Pediatric Gastroenterology and Nutrition. 63, 6, p. 688-697 10 p.

Research output: Contribution to journalArticle

Prebiotics
Neurotransmitter Agents
Milk
Feces
Diet
2015

Characterization of the intestinal lactobacilli community following galactooligosaccharides and polydextrose supplementation in the neonatal piglet

Hoeflinger, J. L., Kashtanov, D. O., Cox, S. B., Dowd, S. E., Jouni, Z. E., Donovan, S. M. & Miller, M. J., Aug 14 2015, In : PloS one. 10, 8, e0135494.

Research output: Contribution to journalArticle

polydextrose
galactooligosaccharides
Prebiotics
Lactobacillus
piglets

Galacto-oligosaccharides may directly enhance intestinal barrier function through the modulation of goblet cells

Bhatia, S., Prabhu, P. N., Benefiel, A. C., Miller, M. J., Chow, J., Davis, S. R. & Gaskins, H. R., Mar 1 2015, In : Molecular Nutrition and Food Research. 59, 3, p. 566-573 8 p.

Research output: Contribution to journalArticle

galactooligosaccharides
Goblet Cells
goblet cells
Oligosaccharides
resistin

In vitro impact of human milk oligosaccharides on Enterobacteriaceae growth

Hoeflinger, J. L., Davis, S. R., Chow, J. M. & Miller, M. J., Apr 1 2015, In : Journal of Agricultural and Food Chemistry. 63, 12, p. 3295-3302 8 p.

Research output: Contribution to journalArticle

Human Milk
Enterobacteriaceae
breast milk
Oligosaccharides
oligosaccharides

Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants

Lewis, Z. T., Totten, S. M., Smilowitz, J. T., Popovic, M., Parker, E., Lemay, D. G., Van Tassell, M. L., Miller, M. J., Jin, Y. S., German, J. B., Lebrilla, C. B. & Mills, D. A., Apr 10 2015, In : Microbiome. 3, 1, 13.

Research output: Contribution to journalArticle

Mothers
Bifidobacterium
Oligosaccharides
Feces
Milk

Myrosinase-dependent and –independent formation and control of isothiocyanate products of glucosinolate hydrolysis

Angelino, D., Dosz, E. B., Sun, J., Hoeflinger, J. L., Van Tassell, M. L., Chen, P., Harnly, J. M., Miller, M. J. & Jeffery, E. H., Oct 6 2015, In : Frontiers in Plant Science. 6, OCTOBER, 831.

Research output: Contribution to journalArticle

thioglucosidase
isothiocyanates
glucosinolates
thiols
hydrolysis

Use of a miniature laboratory fresh cheese model for investigating antimicrobial activities

Van Tassell, M. L., Ibarra-Sánchez, L. A., Takhar, S. R., Amaya-Llano, S. L. & Miller, M. J., Dec 1 2015, In : Journal of Dairy Science. 98, 12, p. 8515-8524 10 p.

Research output: Contribution to journalArticle

fresh cheeses
ferulic acid
Cheese
Listeria monocytogenes
anti-infective agents
2014

A piglet model for studying Candida albicans colonization of the human oro-gastrointestinal tract

Hoeflinger, J. L., Coleman, D. A., Oh, S. H., Miller, M. J. & Hoyer, L. L., Aug 2014, In : FEMS microbiology letters. 357, 1, p. 10-15 6 p.

Research output: Contribution to journalArticle

Candida albicans
Gastrointestinal Tract
Swine
Microbiota
Esophagus

Glycan-specific whole cell affinity chromatography: A versatile microbial adhesion platform

Van Tassell, M. L., Price, N. P. J. & Miller, M. J., 2014, In : MethodsX. 1, p. 244-250 7 p.

Research output: Contribution to journalArticle

Affinity chromatography
Affinity Chromatography
Polysaccharides
Adhesion
Microbial Interactions

Human milk oligosaccharides shorten rotavirus-induced diarrhea and modulate piglet mucosal immunity and colonic microbiota

Li, M., Monaco, M. H., Wang, M., Comstock, S. S., Kuhlenschmidt, T. B., Fahey, G. C., Miller, M. J., Kuhlenschmidt, M. S. & Donovan, S. M., Aug 2014, In : ISME Journal. 8, 8, p. 1609-1620 12 p.

Research output: Contribution to journalArticle

mucosal immunity
Mucosal Immunity
Rotavirus
Microbiota
Human Milk
2013

Methylphenidate prevents high-fat diet (HFD)-induced learning/memory impairment in juvenile mice

Kaczmarczyk, M. M., Machaj, A. S., Chiu, G. S., Lawson, M. A., Gainey, S. J., York, J. M., Meling, D. D., Martin, S. A., Kwakwa, K. A., Newman, A. F., Woods, J. A., Kelley, K. W., Wang, Y., Miller, M. J. & Freund, G. G., Sep 1 2013, In : Psychoneuroendocrinology. 38, 9, p. 1553-1564 12 p.

Research output: Contribution to journalArticle

Methylphenidate
High Fat Diet
Learning
Overnutrition
Anxiety
pork industry
Food Safety
pork
food safety
Industry

Short communication: Phenotypic and genetic diversity of wild lactococcus lactis isolated from traditional pecorino cheeses of tuscany

Turchi, B., Van Tassell, M. L., Lee, A., Nuvoloni, R., Cerri, D. & Miller, M. J., Jun 1 2013, In : Journal of Dairy Science. 96, 6, p. 3558-3563 6 p.

Research output: Contribution to journalArticle

Lactococcus
Multilocus Sequence Typing
Lactococcus lactis
Cheese
cheeses
2012

Characterization of a Panela cheese with added probiotics and fava bean starch

Escobar, M. C., Van Tassell, M. L., Martínez-Bustos, F., Singh, M., Castaño-Tostado, E., Amaya-Llano, S. L. & Miller, M. J., Jun 1 2012, In : Journal of Dairy Science. 95, 6, p. 2779-2787 9 p.

Research output: Contribution to journalArticle

Lactobacillus rhamnosus
Vicia faba
Bifidobacterium breve
Probiotics
Cheese

Consumption of different soymilk formulations differentially affects the gut microbiomes of overweight and obese men

Fernandez-Raudales, D., Hoeflinger, J. L., Bringe, N. A., Cox, S. B., Dowd, S. E., Miller, M. J. & de Mejia, E. G., Nov 1 2012, In : Gut Microbes. 3, 6, p. 490-500 11 p.

Research output: Contribution to journalArticle

Prevotella
Bacteroidetes
Lactobacillus
Bacteroides
Bifidobacterium

Development of a Lactobacillus specific T-RFLP method to determine lactobacilli diversity in complex samples

Chen, L., Teasdale, M. T., Kaczmarczyk, M. M., Freund, G. G. & Miller, M. J., Nov 1 2012, In : Journal of Microbiological Methods. 91, 2, p. 262-268 7 p.

Research output: Contribution to journalArticle

Lactobacillus
Restriction Fragment Length Polymorphisms
DNA Restriction Enzymes
Dietary Supplements
Ribosomal DNA

Identification of lactose phosphotransferase systems in Lactobacillus gasseri ATCC 33323 required for lactose utilization

Francl, A. L., Hoeflinger, J. L. & Miller, M. J., Apr 1 2012, In : Microbiology. 158, 4, p. 944-952 9 p.

Research output: Contribution to journalArticle

Lactose
Phosphotransferases
Lactobacillus gasseri
Growth
Galactosidases
Dietary Fiber
Insurance Benefits
Colonic Neoplasms
Type 2 Diabetes Mellitus
Gastrointestinal Tract

Whole cell biosynthesis of a functional oligosaccharide, 2'-fucosyllactose, using engineered Escherichia coli.

Lee, W. H., Pathanibul, P., Quarterman, J., Jo, J. H., Han, N. S., Miller, M. J., Jin, Y-S. & Seo, J. H., 2012, In : Microbial cell factories. 11

Research output: Contribution to journalArticle

Oligosaccharides
Biosynthesis
Escherichia coli
Fermentation
Lactose
2011

Addition of polydextrose and galactooligosaccharide to formula does not affect bacterial translocation in the neonatal piglet

Monaco, M. H., Kashtanov, D. O., Wang, M., Walker, D. C., Rai, D., Jouni, Z. E., Miller, M. J. & Donovan, S. M., Feb 1 2011, In : Journal of Pediatric Gastroenterology and Nutrition. 52, 2, p. 210-216 7 p.

Research output: Contribution to journalArticle

polydextrose
Bacterial Translocation
Enteral Nutrition
Total Parenteral Nutrition
Lymph Nodes

Assessment of Lactobacillus gasseri as a candidate oral vaccine vector

Stoeker, L., Nordone, S., Gunderson, S., Zhang, L., Kajikawa, A., LaVoy, A., Miller, M., Klaenhammer, T. R. & Dean, G. A., Nov 1 2011, In : Clinical and Vaccine Immunology. 18, 11, p. 1834-1844 11 p.

Research output: Contribution to journalArticle

Flagellin
Vaccines
Chemical activation
Lactobacillus
Immunization

Construction of vectors for inducible and constitutive gene expression in Lactobacillus

Duong, T., Miller, M. J., Barrangou, R., Azcarate-Peril, M. A. & Klaenhammer, T. R., May 1 2011, In : Microbial Biotechnology. 4, 3, p. 357-367 11 p.

Research output: Contribution to journalArticle

Lactobacillus acidophilus
Oxalates
Lactobacillus
Operon
Gene expression

Lactobacillus adhesion to mucus

van Tassell, M. L. & Miller, M. J., May 2011, In : Nutrients. 3, 5, p. 613-636 24 p.

Research output: Contribution to journalReview article

Lactobacillus
Mucus
mucus
adhesion
Probiotics
2010

Drivers of liking for yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y., May 1 2010, In : Journal of food science. 75, 4, p. S212-S219

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
prebiotics
yogurt

Glucoraphanin hydrolysis by microbiota in the rat cecum results in sulforaphane absorption

Lai, R. H., Miller, M. J. & Jeffery, E. H., Nov 1 2010, In : Food and Function. 1, 2, p. 161-166 6 p.

Research output: Contribution to journalArticle

glucoraphanin
Cecum
Microbiota
cecum
Hydrolysis

Sensory and microbiological quality of yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y., Oct 1 2010, In : Journal of Dairy Science. 93, 10, p. 4471-4479 9 p.

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
prebiotics
microbiological quality