Research Output 2002 2018

2018

Antimicrobial behavior of phage endolysin PlyP100 and its synergy with nisin to control Listeria monocytogenes in Queso Fresco

Ibarra-Sánchez, L. A., Van Tassell, M. L. & Miller, M. J. Jun 1 2018 In : Food Microbiology. 72, p. 128-134 7 p.

Research output: Contribution to journalArticle

endolysin
Nisin
nisin
Listeria monocytogenes
bacteriophages

Catechin supplemented in a FOS diet induces weight loss by altering cecal microbiota and gene expression of colonic epithelial cells

Luo, J., Han, L., Liu, L., Gao, L., Xue, B., Wang, Y., Ou, S., Miller, M. & Peng, X. May 1 2018 In : Food and Function. 9, 5, p. 2962-2969 8 p.

Research output: Contribution to journalArticle

Reducing Diet
Oligosaccharides
fructooligosaccharides
Catechin
Microbiota

Yeast derived lysA2 can control bacterial contamination in ethanol fermentation

Kim, J. S., Daum, M. A., Jin, Y. S. & Miller, M. J. Jun 1 2018 In : Viruses. 10, 6, 281

Research output: Contribution to journalArticle

Fermentation
Ethanol
Yeasts
Saccharum
Lactobacillaceae
2017

A dynamic regression analysis tool for quantitative assessment of bacterial growth written in Python

Hoeflinger, J. L., Hoeflinger, D. E. & Miller, M. J. Jan 1 2017 In : Journal of Microbiological Methods. 132, p. 83-85 3 p.

Research output: Contribution to journalArticle

Boidae
Regression Analysis
Lactobacillus
Growth
Carbohydrates

Cronobacter sakazakii ATCC 29544 autoaggregation requires flic flagellation, not motility

Hoeflinger, J. L. & Miller, M. J. Feb 28 2017 In : Frontiers in Microbiology. 8, FEB, 301

Research output: Contribution to journalArticle

Cronobacter sakazakii
Flagella
Flagellin
Gene Knockout Techniques
Frameshift Mutation
Clostridium saccharoperbutylacetonicum
Metabolic Engineering
Butanols
metabolic engineering
Clostridium

Dietary broccoli alters rat cecal microbiota to improve glucoraphanin hydrolysis to bioactive isothiocyanates

Liu, X., Wang, Y., Hoeflinger, J. L., Neme, B. P., Jeffery, E. H. & Miller, M. J. Mar 10 2017 In : Nutrients. 9, 3, 262

Research output: Contribution to journalArticle

glucoraphanin
Isothiocyanates
Brassica
Microbiota
isothiocyanates

Draft genome sequence of the murine bacterial isolate Lactobacillus murinus EF-1

Fritz, E. & Miller, M. J. 2017 In : Genome Announcements. 5, 12, e00077-17

Research output: Contribution to journalArticle

Peptide Elongation Factor 1
Lactobacillus
Genome
Prophages
Base Composition

HM2-phage resistant solventogenic Clostridium saccharoperbutylacetonicum N1-4 shows increased exopolysaccharide production

Liu, X., Turchi, B., Mok, K. C., Taga, M. E. & Miller, M. J. Oct 1 2017 In : FEMS Microbiology Letters. 364, 19, fnx191

Research output: Contribution to journalLetter

Clostridium
Bacteriophages
Fermentation
Adsorption
Genome Size

Hot topic: Antilisterial activity by endolysin PlyP100 in fresh cheese

Van Tassell, M. L., Ibarra-Sánchez, L. A., Hoepker, G. P. & Miller, M. J. Apr 1 2017 In : Journal of Dairy Science. 100, 4, p. 2482-2487 6 p.

Research output: Contribution to journalArticle

endolysin
fresh cheeses
Cheese
Listeria monocytogenes
bacteriophages

Human milk oligosaccharide consumption by probiotic and human-associated bifidobacteria and lactobacilli

Thongaram, T., Hoeflinger, J. L., Chow, J. M. & Miller, M. J. Oct 1 2017 In : Journal of Dairy Science. 100, 10, p. 7825-7833 9 p.

Research output: Contribution to journalArticle

Bifidobacterium longum subsp. infantis
Bifidobacterium
Lactobacillus acidophilus
Probiotics
Lactobacillus

Invited review: Hispanic-style cheeses and their association with Listeria monocytogenes

Ibarra-Sánchez, L. A., Van Tassell, M. L. & Miller, M. J. Apr 1 2017 In : Journal of Dairy Science. 100, 4, p. 2421-2432 12 p.

Research output: Contribution to journalArticle

Cheese
Listeria monocytogenes
Hispanic Americans
cheeses
Pasteurization

Molecular weight distribution and fermentation of mechanically pre-treated konjac enzymatic hydrolysates

Yang, J., Vittori, N., Wang, W., Shi, Y. C., Hoeflinger, J. L., Miller, M. J. & Pan, Y. Mar 1 2017 In : Carbohydrate Polymers. 159, p. 58-65 8 p.

Research output: Contribution to journalArticle

Molecular weight distribution
Fermentation
Molecular weight
Fermenters
Depolymerization

Prebiotic Galactooligosaccharide Metabolism by Probiotic Lactobacilli and Bifidobacteria

Thongaram, T., Hoeflinger, J. L., Chow, J. & Miller, M. J. May 24 2017 In : Journal of Agricultural and Food Chemistry. 65, 20, p. 4184-4192 9 p.

Research output: Contribution to journalArticle

galactooligosaccharides
Lactobacillus acidophilus
Prebiotics
Bifidobacterium
Probiotics
2016

Creative lysins: Listeria and the engineering of antimicrobial enzymes

Van Tassell, M. L., Angela Daum, M., Kim, J. S. & Miller, M. J. Feb 1 2016 In : Current Opinion in Biotechnology. 37, p. 88-96 9 p.

Research output: Contribution to journalReview article

Listeria
Biotechnology
Enzymes
Spoilage
Proteins
Campylobacter jejuni
Intestines
Chickens
Genome
Probiotics

Prebiotics and bioactive milk fractions affect gut development, microbiota, and neurotransmitter expression in piglets

Berding, K., Wang, M., Monaco, M. H., Alexander, L. S., Mudd, A. T., Chichlowski, M., Waworuntu, R. V., Berg, B. M., Miller, M. J., Dilger, R. N. & Donovan, S. M. Jan 1 2016 In : Journal of pediatric gastroenterology and nutrition. 63, 6, p. 688-697 10 p.

Research output: Contribution to journalArticle

Prebiotics
Neurotransmitter Agents
Milk
Feces
Diet
2015

Characterization of the intestinal lactobacilli community following galactooligosaccharides and polydextrose supplementation in the neonatal piglet

Hoeflinger, J. L., Kashtanov, D. O., Cox, S. B., Dowd, S. E., Jouni, Z. E., Donovan, S. M. & Miller, M. J. Aug 14 2015 In : PLoS ONE. 10, 8, e0135494

Research output: Contribution to journalArticle

polydextrose
galactooligosaccharides
Prebiotics
Lactobacillus
piglets

Galacto-oligosaccharides may directly enhance intestinal barrier function through the modulation of goblet cells

Bhatia, S., Prabhu, P. N., Benefiel, A. C., Miller, M. J., Chow, J., Davis, S. R. & Gaskins, H. R. Mar 1 2015 In : Molecular Nutrition and Food Research. 59, 3, p. 566-573 8 p.

Research output: Contribution to journalArticle

galactooligosaccharides
Goblet Cells
goblet cells
Oligosaccharides
resistin

In vitro impact of human milk oligosaccharides on Enterobacteriaceae growth

Hoeflinger, J. L., Davis, S. R., Chow, J. & Miller, M. J. Apr 1 2015 In : Journal of Agricultural and Food Chemistry. 63, 12, p. 3295-3302 8 p.

Research output: Contribution to journalArticle

Human Milk
Enterobacteriaceae
breast milk
Oligosaccharides
oligosaccharides

Maternal fucosyltransferase 2 status affects the gut bifidobacterial communities of breastfed infants

Lewis, Z. T., Totten, S. M., Smilowitz, J. T., Popovic, M., Parker, E., Lemay, D. G., Van Tassell, M. L., Miller, M. J., Jin, Y. S., German, J. B., Lebrilla, C. B. & Mills, D. A. Apr 10 2015 In : Microbiome. 3, 1, 13

Research output: Contribution to journalArticle

Mothers
Bifidobacterium
Oligosaccharides
Feces
Milk

Myrosinase-dependent and –independent formation and control of isothiocyanate products of glucosinolate hydrolysis

Angelino, D., Dosz, E. B., Sun, J., Hoeflinger, J. L., Van Tassell, M. L., Chen, P., Harnly, J. M., Miller, M. J. & Jeffery, E. H. Oct 6 2015 In : Frontiers in Plant Science. 6, OCTOBER, 831

Research output: Contribution to journalArticle

thioglucosidase
isothiocyanates
glucosinolates
thiols
hydrolysis

Use of a miniature laboratory fresh cheese model for investigating antimicrobial activities

Van Tassell, M. L., Ibarra-Sánchez, L. A., Takhar, S. R., Amaya-Llano, S. L. & Miller, M. J. Dec 1 2015 In : Journal of dairy science. 98, 12, p. 8515-8524 10 p.

Research output: Contribution to journalArticle

fresh cheeses
ferulic acid
Cheese
Listeria monocytogenes
anti-infective agents
2014

A piglet model for studying Candida albicans colonization of the human oro-gastrointestinal tract

Hoeflinger, J. L., Coleman, D. A., Oh, S. H., Miller, M. J. & Hoyer, L. L. 2014 In : FEMS Microbiology Letters. 357, 1, p. 10-15 6 p.

Research output: Contribution to journalArticle

Candida albicans
Gastrointestinal Tract
Swine
Microbiota
Esophagus

Glycan-specific whole cell affinity chromatography: A versatile microbial adhesion platform

Van Tassell, M. L., Price, N. P. J. & Miller, M. J. Jan 1 2014 In : MethodsX. 1, p. 244-250 7 p.

Research output: Contribution to journalArticle

Affinity chromatography
Affinity Chromatography
Polysaccharides
Adhesion
Microbial Interactions

Human milk oligosaccharides shorten rotavirus-induced diarrhea and modulate piglet mucosal immunity and colonic microbiota

Li, M., Monaco, M. H., Wang, M., Comstock, S. S., Kuhlenschmidt, T. B., Fahey, G. C., Miller, M. J., Kuhlenschmidt, M. S. & Donovan, S. M. Jan 1 2014 In : ISME Journal. 8, 8, p. 1609-1620 12 p.

Research output: Contribution to journalArticle

mucosal immunity
Mucosal Immunity
Rotavirus
Microbiota
Human Milk
2013

Methylphenidate prevents high-fat diet (HFD)-induced learning/memory impairment in juvenile mice

Kaczmarczyk, M. M., Machaj, A. S., Chiu, G. S., Lawson, M. A., Gainey, S. J., York, J. M., Meling, D. D., Martin, S. A., Kwakwa, K. A., Newman, A. F., Woods, J. A., Kelley, K. W., Wang, Y., Miller, M. J. & Freund, G. G. Sep 1 2013 In : Psychoneuroendocrinology. 38, 9, p. 1553-1564 12 p.

Research output: Contribution to journalArticle

Methylphenidate
High Fat Diet
Learning
Overnutrition
Anxiety
pork industry
Food Safety
pork
food safety
Industry

Short communication: Phenotypic and genetic diversity of wild lactococcus lactis isolated from traditional pecorino cheeses of tuscany

Turchi, B., Van Tassell, M. L., Lee, A., Nuvoloni, R., Cerri, D. & Miller, M. J. Jun 1 2013 In : Journal of Dairy Science. 96, 6, p. 3558-3563 6 p.

Research output: Contribution to journalArticle

Lactococcus
Multilocus Sequence Typing
Lactococcus lactis
Cheese
cheeses
2012

Characterization of a Panela cheese with added probiotics and fava bean starch

Escobar, M. C., Van Tassell, M. L., Martínez-Bustos, F., Singh, M., Castaño-Tostado, E., Amaya-Llano, S. L. & Miller, M. J. Jun 1 2012 In : Journal of dairy science. 95, 6, p. 2779-2787 9 p.

Research output: Contribution to journalArticle

Lactobacillus rhamnosus
Vicia faba
Bifidobacterium breve
Probiotics
Cheese

Consumption of different soymilk formulations differentially affects the gut microbiomes of overweight and obese men

Fernandez-Raudales, D., Hoeflinger, J. L., Bringe, N. A., Cox, S. B., Dowd, S. E., Miller, M. J. & de Mejia, E. G. Nov 1 2012 In : Gut microbes. 3, 6, p. 490-500 11 p.

Research output: Contribution to journalArticle

Prevotella
Bacteroidetes
Lactobacillus
Bacteroides
Bifidobacterium

Development of a Lactobacillus specific T-RFLP method to determine lactobacilli diversity in complex samples

Chen, L., Teasdale, M. T., Kaczmarczyk, M. M., Freund, G. G. & Miller, M. J. Nov 1 2012 In : Journal of Microbiological Methods. 91, 2, p. 262-268 7 p.

Research output: Contribution to journalArticle

Lactobacillus
Restriction Fragment Length Polymorphisms
DNA Restriction Enzymes
Dietary Supplements
Ribosomal DNA

Identification of lactose phosphotransferase systems in Lactobacillus gasseri ATCC 33323 required for lactose utilization

Francl, A. L., Hoeflinger, J. L. & Miller, M. J. Apr 2012 In : Microbiology. 158, 4, p. 944-952 9 p.

Research output: Contribution to journalArticle

Lactose
Phosphotransferases
Lactobacillus gasseri
Growth
Genome
Dietary Fiber
Insurance Benefits
Colonic Neoplasms
Type 2 Diabetes Mellitus
Gastrointestinal Tract

Whole cell biosynthesis of a functional oligosaccharide, 2'-fucosyllactose, using engineered Escherichia coli.

Lee, W. H., Pathanibul, P., Quarterman, J., Jo, J. H., Han, N. S., Miller, M. J., Jin, Y. S. & Seo, J. H. Dec 1 2012 In : Microbial cell factories. 11, 48

Research output: Contribution to journalArticle

Oligosaccharides
Biosynthesis
Escherichia coli
Fermentation
Lactose
2011

Addition of polydextrose and galactooligosaccharide to formula does not affect bacterial translocation in the neonatal piglet

Monaco, M. H., Kashtanov, D. O., Wang, M., Walker, D. C., Rai, D., Jouni, Z. E., Miller, M. J. & Donovan, S. M. Feb 2011 In : Journal of Pediatric Gastroenterology and Nutrition. 52, 2, p. 210-216 7 p.

Research output: Contribution to journalArticle

polydextrose
Bacterial Translocation
Enteral Nutrition
Total Parenteral Nutrition
Lymph Nodes

Assessment of Lactobacillus gasseri as a candidate oral vaccine vector

Stoeker, L., Nordone, S., Gunderson, S., Zhang, L., Kajikawa, A., LaVoy, A., Miller, M., Klaenhammer, T. R. & Dean, G. A. Nov 1 2011 In : Clinical and Vaccine Immunology. 18, 11, p. 1834-1844 11 p.

Research output: Contribution to journalArticle

Flagellin
Vaccines
Chemical activation
Lactobacillus
Immunization

Construction of vectors for inducible and constitutive gene expression in Lactobacillus

Duong, T., Miller, M. J., Barrangou, R., Azcarate-Peril, M. A. & Klaenhammer, T. R. May 2011 In : Microbial Biotechnology. 4, 3, p. 357-367 11 p.

Research output: Contribution to journalArticle

Lactobacillus acidophilus
Oxalates
Lactobacillus
Operon
Gene expression

Lactobacillus adhesion to mucus

van Tassell, M. L. & Miller, M. J. Jan 1 2011 In : Nutrients. 3, 5, p. 613-636 24 p.

Research output: Contribution to journalReview article

Lactobacillus
Mucus
mucus
adhesion
Probiotics
2010

Drivers of liking for yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y. May 2010 In : Journal of Food Science. 75, 4

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
prebiotics
yogurt

Glucoraphanin hydrolysis by microbiota in the rat cecum results in sulforaphane absorption

Lai, R. H., Miller, M. J. & Jeffery, E. Nov 2010 In : Food and Function. 1, 2, p. 161-166 6 p.

Research output: Contribution to journalArticle

glucoraphanin
Cecum
Microbiota
cecum
Hydrolysis

Sensory and microbiological quality of yogurt drinks with prebiotics and probiotics

Allgeyer, L. C., Miller, M. J. & Lee, S. Y. Oct 1 2010 In : Journal of Dairy Science. 93, 10, p. 4471-4479 9 p.

Research output: Contribution to journalArticle

Prebiotics
Yogurt
Probiotics
prebiotics
microbiological quality

The PTS transporters of Lactobacillus gasseri ATCC 33323

Francl, A. L., Thongaram, T. & Miller, M. J. Apr 12 2010 In : BMC Microbiology. 10, 77

Research output: Contribution to journalArticle

Phosphotransferases
Cellobiose
Carbohydrates
Lactobacillus
Mannose
2008

Analysis of the genome sequence of Lactobacillus gasseri ATCC 33323 reveals the molecular basis of an autochthonous intestinal organism

Azcarate-Peril, M. A., Altermann, E., Yong, J. G., Tallon, R., Sanozky-Dawes, R. B., Pfeiler, E. A., O'Flaherty, S., Buck, B. L., Dobson, A., Duong, T., Miller, M. J., Barrangou, R. & Klaenhammer, T. R. Aug 2008 In : Applied and Environmental Microbiology. 74, 15, p. 4610-4625 16 p.

Research output: Contribution to journalArticle

Lactobacillus gasseri
Sequence Analysis
genome
Genome
organisms

Genome sequence and characteristics of Lrm1, a prophage from industrial Lactobacillus rhamnosus strain M1

Durmaz, E., Miller, M. J., Azcarate-Peril, M. A., Toon, S. P. & Klaenhammer, T. R. Aug 2008 In : Applied and Environmental Microbiology. 74, 15, p. 4601-4609 9 p.

Research output: Contribution to journalArticle

Lactobacillus rhamnosus
Prophages
bacteriophages
Bacteriophages
genome
2005

Role of cis-acting sites NorL, a TATA box, and AflR1 in nor-1 transcriptiorial activation in Aspergillus parasiticus

Miller, M. J., Roze, L. V., Trail, F. & Linz, J. E. Mar 2005 In : Applied and Environmental Microbiology. 71, 3, p. 1539-1545 7 p.

Research output: Contribution to journalArticle

TATA box
Aspergillus parasiticus
TATA Box
Aflatoxins
Aspergillus
2004

A novel cAMP-response element, CRE1, modulates expression of nor-1 in Aspergillus parasiticus

Roze, L. V., Miller, M. J., Rarick, M., Mahanti, N. & Linz, J. E. Jun 25 2004 In : Journal of Biological Chemistry. 279, 26, p. 27428-27439 12 p.

Research output: Contribution to journalArticle

Aspergillus
Response Elements
Salts
Peptones
Aflatoxins
2002

Chromosomal location plays a role in regulation of aflatoxin gene expression in Aspergillus parasiticus

Chiou, C. H., Miller, M., Wilson, D. L., Trail, F. & Linz, J. E. 2002 In : Applied and Environmental Microbiology. 68, 1, p. 306-315 10 p.

Research output: Contribution to journalArticle

Aspergillus parasiticus
Aflatoxins
Glucuronidase
Gene Expression Regulation
Aspergillus