Mayandi Sivaguru

2024

Impacts of irregularly-distributed acidified brine flow on geo-chemo-mechanical alteration in an artificial shale fracture under differential stress

Fuchs, S. J., Crandall, D., Moore, J. E., Sivaguru, M., Fouke, B. W., Espinoza, D. N., Akono, A. T. & Werth, C. J., Jun 2024, In: International Journal of Greenhouse Gas Control. 135, 104127.

Research output: Contribution to journal › Article › peer-review

Ortho-positronium lifetime for soft-tissue classification

Avachat, A. V., Mahmoud, K. H., Leja, A. G., Xu, J. J., Anastasio, M. A., Sivaguru, M. & Di Fulvio, A., Dec 2024, In: Scientific reports. 14, 1, 21155.

Research output: Contribution to journal › Article › peer-review

Open Access

Osteopontin stabilization and collagen containment slows amorphous calcium phosphate transformation during human aortic valve leaflet calcification

Sivaguru, M., Mori, S., Fouke, K. W., Ajijola, O. A., Shivkumar, K., Samuel, A. Z., Bhargava, R. & Fouke, B. W., Dec 2024, In: Scientific reports. 14, 1, 12222.

Research output: Contribution to journal › Article › peer-review

Open Access

2023

An indentation-based framework for probing the glycosaminoglycan-mediated interactions of collagen fibrils

Ostadi Moghaddam, A., Arshee, M. R., Lin, Z., Sivaguru, M., Phillips, H., McFarlin, B. L., Toussaint, K. C. & Wagoner Johnson, A. J., Apr 2023, In: Journal of the Mechanical Behavior of Biomedical Materials. 140, 105726.

Research output: Contribution to journal › Article › peer-review

Open Access

CHCHD2 mediates glioblastoma cell proliferation, mitochondrial metabolism, hypoxia‑induced invasion and therapeutic resistance

Lumibao, J., Haak, P., Kolossov, V., Chen, J.-W., Stutchman, J., Ruiz, A., Sivaguru, M., Sarkaria, J., Harley, B., Steelman, A. & Gaskins, H. R., Nov 2023, In: International journal of oncology. 63, 5, 117.

Research output: Contribution to journal › Article › peer-review

Open Access

Impact of mono(2-ethylhexyl) phthalate (MEHP) on the development of mouse embryo in vitro

Arcanjo, R. B., Vieira, M. C., Sivaguru, M. & Nowak, R. A., Jan 2023, In: Reproductive Toxicology. 115, p. 111-123 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Orientation-dependent indentation reveals the crosslink-mediated deformation mechanisms of collagen fibrils

Ostadi Moghaddam, A., Arshee, M. R., Lin, Z., Sivaguru, M., Phillips, H., McFarlin, B. L., Toussaint, K. C. & Wagoner Johnson, A. J., Mar 1 2023, In: Acta Biomaterialia. 158, p. 347-357 11 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2022

Depositional and diagenetic history of travertine deposited within the Anio Novus aqueduct of ancient Rome

Sivaguru, M., Fouke, K. W., Keenan-Jones, D., Motta, D., Garcia, M. H. & Fouke, B. W., Jun 21 2022, From the Guajira Desert to the Apennines, and from Mediterranean Microplates to the Mexican Killer Asteroid: Honoring the Career of Walter Alvarez. Koeberl, C., Claeys, P. & Montanari, A. (eds.). Geological Society of America, p. 541-569 29 p. (GSA Special Papers; vol. 557).

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Open Access

GeoBioMed perspectives on kidney stone recurrence from the reactive surface area of SWL-derived particles

Todorov, L. G., Sivaguru, M., Krambeck, A. E., Lee, M. S., Lieske, J. C. & Fouke, B. W., Dec 2022, In: Scientific reports. 12, 1, 18371.

Research output: Contribution to journal › Article › peer-review

Open Access

Heterogeneous microstructural changes of the cervix influence cervical funneling

Moghaddam, A. O., Lin, Z., Sivaguru, M., Phillips, H., McFarlin, B. L., Toussaint, K. C. & Johnson, A. J. W., Mar 1 2022, In: Acta Biomaterialia. 140, p. 434-445 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Insight into differentiation in alkalic systems: Nephelinite-carbonate-water experiments aimed at Ol Doinyo Lengai carbonatite genesis

Lundstrom, C. C., Hervig, R., Fischer, T. P., Sivaguru, M., Yin, L., Zhou, Z., Lin, X. & Grossi-Diniz, R., Sep 8 2022, In: Frontiers in Earth Science. 10, 970264.

Research output: Contribution to journal › Article › peer-review

Open Access

Laser fiber degradation following holmium laser enucleation of the prostate utilizing Moses technology versus regular mode

Assmus, M. A., Lee, M. S., Sivaguru, M., Agarwal, D. K., Large, T., Fouke, B. W. & Krambeck, A. E., May 2022, In: World Journal of Urology. 40, 5, p. 1203–1209 7 p.

Research output: Contribution to journal › Article › peer-review

Rates of Sulfate Reduction by Microbial Biofilms That Form on Shale Fracture Walls within a Microfluidic Testbed

Zhou, L., Michelson, K., Fried, G., Sanford, R. A., Sivaguru, M., Bhattacharjee, A. S., Deng, J., Fouke, B. W., Valocchi, A. J. & Werth, C. J., Sep 9 2022, In: ACS ES and T Engineering. 2, 9, p. 1619-1631 13 p.

Research output: Contribution to journal › Article › peer-review

Renal Macrophages and Multinucleated Giant Cells: Ferrymen of the River Styx?

Sivaguru, M. & Fouke, B. W., Sep 29 2022, In: Kidney360. 3, 9, p. 1616-1619 4 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Sulfate-reducing bacteria streamers and iron sulfides abruptly occlude porosity and increase hydraulic resistance in proppant-filled shale fractures

Fouke, B. W., Bhattacharjee, A. S., Fried, G. A., Sivaguru, M., Sanford, R. A., Zhou, L., Alcalde, R. E., Wunch, K., Stephenson, A., Ferrar, J. A., Hernandez, A. G., Wright, C., Fields, C. J., Todorov, L. G., Fouke, K. W., Bailey, C. M. & Werth, C. J., Jan 1 2022, In: AAPG Bulletin. 106, 1, p. 179-208 30 p.

Research output: Contribution to journal › Article › peer-review

Travertine crystal growth ripples record the hydraulic history of ancient Rome’s Anio Novus aqueduct

Keenan-Jones, D., Motta, D., Garcia, M. H., Sivaguru, M., Perillo, M., Shosted, R. K. & Fouke, B. W., Dec 2022, In: Scientific reports. 12, 1, 1239.

Research output: Contribution to journal › Article › peer-review

Open Access

2021

Amino terminus of cardiac myosin binding protein-C regulates cardiac contractility

Lynch, T. L., Kumar, M., McNamara, J. W., Kuster, D. W. D., Sivaguru, M., Singh, R. R., Previs, M. J., Lee, K. H., Kuffel, G., Zilliox, M. J., Lin, B. L., Ma, W., Gibson, A. M., Blaxall, B. C., Nieman, M. L., Lorenz, J. N., Leichter, D. M., Leary, O. P., Janssen, P. M. L. & de Tombe, P. P. & 5 others, Gilbert, R. J., Craig, R., Irving, T., Warshaw, D. M. & Sadayappan, S., Jul 2021, In: Journal of Molecular and Cellular Cardiology. 156, p. 33-44 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Changes in Coral Skeleton Growth Recorded by Density Band Stratigraphy, Crystalline Structure, and Hiatuses

Fouke, K. W., Trop, J. M. & Sivaguru, M., Dec 23 2021, In: Frontiers in Marine Science. 8, 725122.

Research output: Contribution to journal › Article › peer-review

Open Access

Corals regulate the distribution and abundance of Symbiodiniaceae and biomolecules in response to changing water depth and sea surface temperature

Sivaguru, M., Todorov, L. G., Fouke, C. E., Munro, C. M. O., Fouke, K. W., Fouke, K. E., Baughman, M. E. & Fouke, B. W., Jan 26 2021, In: Scientific reports. 11, 1, p. 2230 2230.

Research output: Contribution to journal › Article › peer-review

Open Access

Dose-independent threshold illumination for non-invasive time-lapse fluorescence imaging of live cells

Emon, M. A. B., Knoll, S., Doha, U., Ladehoff, L., Lalonde, L., Baietto, D., Sivaguru, M., Bhargava, R. & Saif, M. T. A., Jul 2021, In: Extreme Mechanics Letters. 46, 101249.

Research output: Contribution to journal › Article › peer-review

Geochemically induced shear slip in artificially fractured dolomite- and clay-cemented sandstone

Fuchs, S. J., Crandall, D., Moore, J. E., Sivaguru, M., Fouke, B. W., Espinoza, D. N., Akono, A. T. & Werth, C. J., Oct 2021, In: International Journal of Greenhouse Gas Control. 111, 103448.

Research output: Contribution to journal › Article › peer-review

Open Access

Human kidney stones: a natural record of universal biomineralization

Sivaguru, M., Saw, J. J., Wilson, E. M., Lieske, J. C., Krambeck, A. E., Williams, J. C., Romero, M. F., Fouke, K. W., Curtis, M. W., Kear-Scott, J. L., Chia, N. & Fouke, B. W., Jul 2021, In: Nature Reviews Urology. 18, 7, p. 404-432 29 p.

Research output: Contribution to journal › Review article › peer-review

In Vivo Entombment of Bacteria and Fungi during Calcium Oxalate, Brushite, and Struvite Urolithiasis

Saw, J. J., Sivaguru, M., Wilson, E. M., Dong, Y., Sanford, R. A., Fields, C. J., Cregger, M. A., Merkel, A. C., Bruce, W. J., Weber, J. R., Lieske, J. C., Krambeck, A. E., Rivera, M. E., Large, T., Lange, D., Bhattacharjee, A. S., Romero, M. F., Chia, N. & Fouke, B. W., Feb 1 2021, In: Kidney360. 2, 2, p. 298-311 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Visualizing ecological data in Pennsylvanian coal balls using computer tomography (CT)

Lakeram, S., Punyasena, S., Sivaguru, M. & Elrick, S., 2021, Geological Society of America, 2021 annual meeting; GSA connects 2021. Geological Society of America (GSA), Boulder, CO, United States

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2020

GeoBioMed sheds new light on human kidney stone crystallization and dissolution

Sivaguru, M., Lieske, J. C., Krambeck, A. E. & Fouke, B. W., Jan 1 2020, In: Nature Reviews Urology. 17, 1

Research output: Contribution to journal › Comment/debate › peer-review

Neutrophil-selective deletion of Cxcr2 protects against CNS neurodegeneration in a mouse model of multiple sclerosis

Khaw, Y. M., Cunningham, C., Tierney, A., Sivaguru, M. & Inoue, M., Feb 4 2020, In: Journal of neuroinflammation. 17, 1, 49.

Research output: Contribution to journal › Article › peer-review

Open Access

2019

A Confocal Reflection Super-Resolution Technique to Image Golgi-Cox Stained Neurons

Sivaguru, M., Khaw, Y. M. & Inoue, M., Aug 2019, In: Journal of Microscopy. 275, 2, p. 115-130 16 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Adaptive evolution of escherichia coli to ciprofloxacin in controlled stress environments: Contrasting patterns of resistance in spatially varying versus uniformly mixed concentration conditions

Deng, J., Zhou, L., Sanford, R. A., Shechtman, L. A., Dong, Y., Alcalde, R. E., Sivaguru, M., Fried, G. A., Werth, C. J. & Fouke, B. W., Jul 16 2019, In: Environmental Science and Technology. 53, 14, p. 7996-8005 10 p.

Research output: Contribution to journal › Article › peer-review

Altered C10 domain in cardiac myosin binding protein-C results in hypertrophic cardiomyopathy

Kuster, D. W. D., Lynch, T. L., Barefield, D. Y., Sivaguru, M., Kuffel, G., Zilliox, M. J., Lee, K. H., Craig, R., Namakkal-Soorappan, R. & Sadayappan, S., Dec 1 2019, In: Cardiovascular research. 115, 14, p. 1986-1997 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Correction Factors for δ¹⁸O-Derived Global Sea Surface Temperature Reconstructions From Diagenetically Altered Intervals of Coral Skeletal Density Banding

Sivaguru, M., Fouke, K. W., Todorov, L., Kingsford, M. J., Fouke, K. E., Trop, J. M. & Fouke, B. W., Jun 18 2019, In: Frontiers in Marine Science. 6, JUN, 306.

Research output: Contribution to journal › Article › peer-review

Open Access

Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats

Dong, Y., Sanford, R. A., Inskeep, W. P., Srivastava, V., Bulone, V., Fields, C. J., Yau, P. M., Sivaguru, M., Ahrén, D., Fouke, K. W., Weber, J., Werth, C. R., Cann, I. K., Keating, K. M., Khetani, R. S., Hernandez, A. G., Wright, C., Band, M., Imai, B. S. & Fried, G. A. & 1 others, Fouke, B. W., Dec 2019, In: Astrobiology. 19, 12, p. 1442-1458 17 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Re: Geobiology reveals how human kidney stones dissolve in vivo

Sivaguru, M., Saw, J. J., Williams, J. C., Lieske, J. C., Krambeck, A. E., Romero, M. F., Chia, N., Schwaderer, A. L., Alcalde, R. E., Bruce, W. J., Wildman, D. E., Fried, G. A., Werth, C. J., Reeder, R. J., Yau, P. M., Sanford, R. A. & Fouke, B. W., Apr 1 2019, In: Journal of Urology. 201, 4, p. 663-664 2 p.

Research output: Contribution to journal › Comment/debate › peer-review

2018

Airyscan super-resolution microscopy of mitochondrial morphology and dynamics in living tumor cells

Kolossov, V. L., Sivaguru, M., Huff, J., Luby, K., Kanakaraju, K. & Gaskins, H. R., Feb 1 2018, In: Microscopy research and technique. 81, 2, p. 115-128 14 p.

Research output: Contribution to journal › Article › peer-review

Carl R. Woese and the journey toward a universal tree of life

Fouke, B. W., Solai, K., Jones, S. L., Smith, E. M., Fouke, K. W., Fouke, K. E., Lutz, C. C., Sivaguru, M. & Fried, G. A., Dec 7 2018, Handbook of Astrobiology. CRC Press, p. 555-565 11 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Characterization of a reflective objective with multiphoton microscopy

Kabir, M. M., Choubal, A. M., Sivaguru, M. & Toussaint, K. C., 2018, Multiphoton Microscopy in the Biomedical Sciences XVIII. Periasamy, A., Xie, X. S., Xie, X. S., Konig, K. & So, P. T. C. (eds.). SPIE, 104982Z. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10498).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Comparative performance of airyscan and structured illumination superresolution microscopy in the study of the surface texture and 3D shape of pollen

Sivaguru, M., Urban, M. A., Fried, G., Wesseln, C. J., Mander, L. & Punyasena, S. W., Feb 1 2018, In: Microscopy research and technique. 81, 2, p. 101-114 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

CRISPR/Cas9-mediated knock-in of an optimized TetO repeat for live cell imaging of endogenous loci

Tasan, I., Sustackova, G., Zhang, L., Kim, J., Sivaguru, M., HamediRad, M., Wang, Y., Genova, J., Ma, J., Belmont, A. S. & Zhao, H., Sep 28 2018, In: Nucleic acids research. 46, 17, e100.

Research output: Contribution to journal › Article › peer-review

Open Access

Cuticle and subsurface ornamentation of intact plant leaf epidermis under confocal and superresolution microscopy

Urban, M. A., Barclay, R. S., Sivaguru, M. & Punyasena, S. W., Feb 1 2018, In: Microscopy research and technique. 81, 2, p. 129-140 12 p.

Research output: Contribution to journal › Article › peer-review

Editorial preface to special issue

Sivaguru, M., Feb 1 2018, In: Microscopy research and technique. 81, 2, p. 99-100 2 p.

Research output: Contribution to journal › Editorial › peer-review

Geobiology reveals how human kidney stones dissolve in vivo

Sivaguru, M., Saw, J. J., Williams, J. C., Lieske, J. C., Krambeck, A. E., Romero, M. F., Chia, N., Schwaderer, A. L., Alcalde, R. E., Bruce, W. J., Wildman, D. E., Fried, G. A., Werth, C. J., Reeder, R. J., Yau, P. M., Sanford, R. A. & Fouke, B. W., Dec 1 2018, In: Scientific reports. 8, 1, 13731.

Research output: Contribution to journal › Article › peer-review

Open Access

Nested cell strainers: An alternative method of preparing palynomorphs and charcoal

Urban, M. A., Romero, I. C., Sivaguru, M. & Punyasena, S. W., Jun 2018, In: Review of Palaeobotany and Palynology. 253, p. 101-109 9 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Online, classroom and wilderness teaching environments: Reaching astrobiology learners of all ages around the world

Fouke, B. W., Fouke, K. W., Murphy, T., Cook, C. N., Michelson, B. F., Cross, J. L., Destefano, L., Fried, G. A., Solai, K., Malinowsky, J. W., Kelly, S. B., Lutz, C. C., Louer, E., Fenlon, C. C., Vasi, N. P., Gulley, A. M. & Sivaguru, M., Dec 7 2018, Handbook of Astrobiology. CRC Press, p. 27-44 18 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

Second-harmonic patterned polarization-analyzed reflection confocal microscopy of stromal collagen in benign and malignant breast tissues

Okoro, C., Kelkar, V., Sivaguru, M., Emmadi, R. & Toussaint, K. C., Dec 1 2018, In: Scientific reports. 8, 1, 16243.

Research output: Contribution to journal › Article › peer-review

Open Access

2017

Application of an advanced maximum likelihood estimation restoration method for enhanced-resolution and contrast in second-harmonic generation microscopy

Sivaguru, M., Kabir, M. M., Gartia, M. R., Biggs, D. S. C., Sivaguru, B. S., Sivaguru, V. A., Fried, G. A., Liu, G. L., Sadayappan, S. & Toussaint, K. C., Sep 2017, In: Journal of Microscopy. 267, 3, p. 397-408 12 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Enhancing resolution and contrast in second-harmonic generation microscopy using an advanced maximum likelihood estimation restoration method

Sivaguru, M., Kabir, M. M., Gartia, M. R., Biggs, D. S. C., Sivaguru, B. S., Sivaguru, V. A., Berent, Z. T., Wagoner Johnson, A. J., Fried, G. A., Liu, G. L., Sadayappan, S. & Toussaint, K. C., 2017, Multiphoton Microscopy in the Biomedical Sciences XVII. Konig, K., So, P. T. C., Periasamy, A. & Xie, X. S. (eds.). SPIE, 1006908. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10069).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Real rock-microfluidic flow cell: A test bed for real-time in situ analysis of flow, transport, and reaction in a subsurface reactive transport environment

Singh, R., Sivaguru, M., Fried, G. A., Fouke, B. W., Sanford, R. A., Carrera, M. & Werth, C. J., 2017, In: Journal of Contaminant Hydrology. 204, p. 28-39 12 p.

Research output: Contribution to journal › Article › peer-review

2016

Common bean (Phaseolus vulgaris L.) protein-derived peptides increased insulin secretion, inhibited lipid accumulation, increased glucose uptake and reduced the phosphatase and tensin homologue activation in vitro

Oseguera Toledo, M. E., Gonzalez de Mejia, E., Sivaguru, M. & Amaya-Llano, S. L., Dec 1 2016, In: Journal of Functional Foods. 27, p. 160-177 18 p.

Research output: Contribution to journal › Article › peer-review

Light sheet microscopy reveals more gradual light attenuation in light-green versus dark-green soybean leaves

Slattery, R. A., Grennan, A. K., Sivaguru, M., Sozzani, R. & Ort, D. R., Aug 1 2016, In: Journal of experimental botany. 67, 15, p. 4697-4709 13 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Tendon-derived progenitor cells improve healing of collagenase-induced flexor tendinitis

Durgam, S. S., Stewart, A. A., Sivaguru, M., Wagoner Johnson, A. J. & Stewart, M. C., Dec 1 2016, In: Journal of Orthopaedic Research. 34, 12, p. 2162-2171 10 p.

Research output: Contribution to journal › Article › peer-review

Open Access

2015

Cardiac muscle organization revealed in 3-D by imaging whole-mount mouse hearts using twophoton fluorescence and confocal microscopy

Sivaguru, M., Fried, G., Sivaguru, B. S., Sivaguru, V. A., Lu, X., Choi, K. H., Saif, M. T. A., Lin, B. & Sadayappan, S., Nov 2015, In: BioTechniques. 59, 5, p. 295-308 14 p.

Research output: Contribution to journal › Article › peer-review

Open Access

Mayandi Sivaguru

Research output

Search results