Matthew Jon Yoder

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Research Output

2002
2004

Revision of the North American species of the genus Entomacis (Hymenoptera: Diapriidae)

Yoder, M. J., Jan 1 2004, In : Canadian Entomologist. 136, 3, p. 323-405 83 p.

Research output: Contribution to journalArticle

2005

A secondary structural model of the 28S rRNA expansion segments D2 and D3 for chalcidoid wasps (Hymenoptera: Chalcidoidea)

Gillespie, J. J., Munro, J. B., Heraty, J. M., Yoder, M. J., Owen, A. K. & Carmichael, A. E., Jul 1 2005, In : Molecular biology and evolution. 22, 7, p. 1593-1608 16 p.

Research output: Contribution to journalArticle

Assessing the odd secondary structural properties of nuclear small subunit ribosomal RNA sequences (18S) of the twisted-wing parasites (Insecta: Strepsiptera)

Gillespie, J. J., McKenna, C. H., Yoder, M. J., Gutell, R. R., Johnston, J. S., Kathirithamby, J. & Cognato, A. I., Dec 1 2005, In : Insect Molecular Biology. 14, 6, p. 625-643 19 p.

Research output: Contribution to journalArticle

2006

An evaluation of ensign wasp classification (Hymenoptera: Evaniidae) based on molecular data and insights from ribosomal RNA secondary structure

Deans, A. R., Gillespie, J. J. & Yoder, M. J., Jul 1 2006, In : Systematic Entomology. 31, 3, p. 517-528 12 p.

Research output: Contribution to journalArticle

Relationships of Exodontiella, a non-alysiine, exodont member of the family Braconidae (Insecta, Hymenoptera)

Wharton, R. A., Yoder, M. J., Gillespie, J. J., Patton, J. C. & Honeycutt, R. L., Jul 1 2006, In : Zoologica Scripta. 35, 4, p. 323-340 18 p.

Research output: Contribution to journalArticle

2008

A monograph of the genus Westwoodia (Hymenoptera: Ichneumonidae)

Wharton, R. A., Roeder, K. & Yoder, M. J., Aug 22 2008, In : Zootaxa. 1855, p. 1-40 40 p.

Research output: Contribution to journalArticle

2009

Identity and synonymy of Dicroscelio Kieffer and description of Axea, a new genus from tropical Africa and Asia (Hymenoptera: Platygastroidea: Platygastridae)

Yoder, M. J., Valerio, A. A., Masner, L. & Johnson, N. F., Feb 5 2009, In : Zootaxa. 2003, p. 1-45 45 p.

Research output: Contribution to journalArticle

Open Access

Revision of Scelio pulchripennis - group species (Hymenoptera, Platygastroidea, Platygastridae)

Yoder, M. J., Valerio, A. A., Polaszek, A., Masner, L. & Johnson, N. F., Dec 1 2009, In : ZooKeys. 20, SPEC. ISSUE 2, p. 53-118 66 p.

Research output: Contribution to journalArticle

2010

A gross anatomy ontology for hymenoptera

Yoder, M. J., Mikó, I., Seltmann, K. C., Bertone, M. A. & Deans, A. R., Dec 1 2010, In : PloS one. 5, 12, e15991.

Research output: Contribution to journalArticle

2011

Multi-species anatomy ontology development requires a pluralist approach to label-class mapping

Mikó, I., Yoder, M. J., Bertone, M. A., Seltmann, K. C. & Deans, A. R., Dec 1 2011, In : CEUR Workshop Proceedings. 833, p. 422-424 3 p.

Research output: Contribution to journalConference article

2012

A hymenopterists' guide to the Hymenoptera Anatomy Ontology: Utility, clarification, and future directions

Seltmann, K. C., Yoder, M. J., Mikó, I., Forshage, M., Bertone, M. A., Agosti, D., Austin, A. D., Balhoff, J. P., Borowiec, M. L., Brady, S. G., Broad, G. R., XBrothers, G. R., Burks, R. A., Buffington, M. L., Campbell, H. M., Dew, K. J., Ernst, A. F., Fernández-Triana, J. L., Gates, M. W., Gibson, G. A. P. & 18 others, Jennings, J. T., Johnson, N. F., Karlsson, D., Kawada, R., Krogmann, L., Kula, R. R., Mullins, P. L., Ohl, M., Rasmussen, C., Ronquist, F., Schulmeister, S., Sharkey, M. J., Talamas, E., Tucker, E., Vilhelmsen, L., Ward, P. S., Wharton, R. A. & Deans, A. R., Jul 9 2012, In : Journal of Hymenoptera Research. 27, 1, p. 67-88 22 p.

Research output: Contribution to journalArticle

Nearly complete rRNA genes from 371 Animalia: Updated structure-based alignment and detailed phylogenetic analysis

Mallatt, J., Craig, C. W. & Yoder, M. J., Sep 1 2012, In : Molecular Phylogenetics and Evolution. 64, 3, p. 603-617 15 p.

Research output: Contribution to journalArticle

On dorsal prothoracic appendages in treehoppers (Hemiptera: Membracidae) and the nature of morphological evidence

Mikó, I., Friedrich, F., Yoder, M. J., Hines, H. M., Deitz, L. L., Bertone, M. A., Seltmann, K. C., Wallace, M. S. & Deans, A. R., Jan 17 2012, In : PloS one. 7, 1, e30137.

Research output: Contribution to journalArticle

Time to change how we describe biodiversity

Deans, A. R., Yoder, M. J. & Balhoff, J. P., Feb 1 2012, In : Trends in Ecology and Evolution. 27, 2, p. 78-84 7 p.

Research output: Contribution to journalReview article

2013

A phylogenetic analysis of the megadiverse Chalcidoidea (Hymenoptera)

Heraty, J. M., Burks, R. A., Cruaud, A., Gibson, G. A. P., Liljeblad, J., Munro, J., Rasplus, J. Y., Delvare, G., Janšta, P., Gumovsky, A., Huber, J., Woolley, J. B., Krogmann, L., Heydon, S., Polaszek, A., Schmidt, S., Darling, D. C., Gates, M. W., Mottern, J., Murray, E. & 7 others, Dal Molin, A., Triapitsyn, S., Baur, H., Pinto, J. D., van Noort, S., George, J. & Yoder, M., Oct 1 2013, In : Cladistics. 29, 5, p. 466-542 77 p.

Research output: Contribution to journalArticle

A semantic model for species description applied to the ensign wasps (Hymenoptera: Evaniidae) of new caledonia

Balhoff, J. P., Mikó, I., Yoder, M. J., Mullins, P. L. & Deans, A. R., Sep 1 2013, In : Systematic biology. 62, 5, p. 639-659 21 p.

Research output: Contribution to journalArticle

Male terminalia of Ceraphronoidea: Morphological diversity in an otherwise monotonous taxon

Mikó, I., Masner, L., Johannes, E., Yoder, M. J. & Deans, A. R., Dec 17 2013, In : Insect Systematics and Evolution. 44, 3-4, p. 261-347 87 p.

Research output: Contribution to journalArticle

Matching arthropod anatomy ontologies to the Hymenoptera Anatomy Ontology: Results from a manual alignment

Bertone, M. A., Mikó, I., Yoder, M. J., Seltmann, K. C., Balhoff, J. P. & Deans, A. R., Dec 1 2013, In : Database. 2013, bas057.

Research output: Contribution to journalArticle

Utilizing Descriptive Statements from the Biodiversity Heritage Library to Expand the Hymenoptera Anatomy Ontology

Seltmann, K. C., Pénzes, Z., Yoder, M. J., Bertone, M. A. & Deans, A. R., Feb 18 2013, In : PloS one. 8, 2, e55674.

Research output: Contribution to journalArticle

2014

Folding wings like a cockroach: A review of transverse wing folding ensign wasps (Hymenoptera: Evaniidae: Afrevania and Trissevania)

Mikó, I., Copeland, R. S., Balhoff, J. P., Yoder, M. J. & Deans, A. R., May 2 2014, In : PloS one. 9, 5, p. e94056 e94056.

Research output: Contribution to journalArticle

Monograph of the afrotropical species of Scelio Latreille (hymenoptera, platygastridae), egg parasitoids of acridid grasshoppers (Orthoptera, Acrididae)

Yoder, M. J., Valerio, A. A., Polaszek, A., van Noort, S., Masner, L. & Johnson, N. F., Feb 25 2014, In : ZooKeys. 380, SPEC. ISSUE, p. 1-188 188 p.

Research output: Contribution to journalArticle

2015

Finding Our Way through Phenotypes

Deans, A. R., Lewis, S. E., Huala, E., Anzaldo, S. S., Ashburner, M., Balhoff, J. P., Blackburn, D. C., Blake, J. A., Burleigh, J. G., Chanet, B., Cooper, L. D., Courtot, M., Csösz, S., Cui, H., Dahdul, W., Das, S., Dececchi, T. A., Dettai, A., Diogo, R., Druzinsky, R. E. & 54 others, Dumontier, M., Franz, N. M., Friedrich, F., Gkoutos, G. V., Haendel, M., Harmon, L. J., Hayamizu, T. F., He, Y., Hines, H. M., Ibrahim, N., Jackson, L. M., Jaiswal, P., James-Zorn, C., Köhler, S., Lecointre, G., Lapp, H., Lawrence, C. J., Le Novère, N., Lundberg, J. G., Macklin, J., Mast, A. R., Midford, P. E., Mikó, I., Mungall, C. J., Oellrich, A., Osumi-Sutherland, D., Parkinson, H., Ramírez, M. J., Richter, S., Robinson, P. N., Ruttenberg, A., Schulz, K. S., Segerdell, E., Seltmann, K. C., Sharkey, M. J., Smith, A. D., Smith, B., Specht, C. D., Squires, R. B., Thacker, R. W., Thessen, A., Fernandez-Triana, J., Vihinen, M., Vize, P. D., Vogt, L., Wall, C. E., Walls, R. L., Westerfeld, M., Wharton, R. A., Wirkner, C. S., Woolley, J. B., Yoder, M. J., Zorn, A. M. & Mabee, P., Jan 1 2015, In : PLoS biology. 13, 1

Research output: Contribution to journalArticle

2016

Co-designing scientific software: Hackathons for participatory interface design

Thomer, A. K., Twidale, M. B., Guo, J. & Yoder, M. J., May 7 2016, CHI EA 2016: #chi4good - Extended Abstracts, 34th Annual CHI Conference on Human Factors in Computing Systems. Association for Computing Machinery, p. 3219-3226 8 p. (Conference on Human Factors in Computing Systems - Proceedings; vol. 07-12-May-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Malagasy Conostigmus (Hymenoptera: Ceraphronoidea) and the secret of scutes

Mikó, I., Trietsch, C., Sandall, E. L., Yoder, M. J., Hines, H. & Deans, A. R., Jan 1 2016, In : PeerJ. 2016, 12, 2682.

Research output: Contribution to journalArticle

2017

Design and use of NOMEN, an ontology defining the rules of biological nomenclature

Yoder, M., Dmitriev, D., Pereira, J. L. & Cigliano, M. M., 2017, Proceedings of TDWG. Vol. 1. p. e20284

Research output: Chapter in Book/Report/Conference proceedingConference contribution

The first organ-based ontology for arthropods (Ontology of Arthropod Circulatory Systems - OArCS) and its integration into a novel formalization scheme for morphological descriptions

Wirkner, C. S., Göpel, T., Runge, J., Keiler, J., Klussmann-Fricke, B. J., Huckstorf, K., Scholz, S., Mikó, I., Yoder, M. J. & Richter, S., Sep 1 2017, In : Systematic biology. 66, 5, p. 754-768 15 p.

Research output: Contribution to journalArticle

Transforming Taxonomic Interfaces

Thomer, A. K., Twidale, M. B. & Yoder, M. J., 2018, p. 173:1-173:23.

Research output: Contribution to conferencePaper

Wet collections accession: a workflow based on a large stonefly (Insecta, Plecoptera) donation.

DeWalt, R. E., Yoder, M., Snyder, E. A., Dmitriev, D. & Ower, G. D., 2018, In : Biodiversity Data Journal. 6, p. e30256-e30256

Research output: Contribution to journalArticle

2020

Conflicting signal in transcriptomic markers leads to a poorly resolved backbone phylogeny of chalcidoid wasps

Zhang, J., Lindsey, A. R. I., Peters, R. S., Heraty, J. M., Hopper, K. R., Werren, J. H., Martinson, E. O., Woolley, J. B., Yoder, M. J. & Krogmann, L., Jan 1 2020, (Accepted/In press) In : Systematic Entomology.

Research output: Contribution to journalArticle