Mark Robert Band

1993 …2019
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Research Output 1993 2019

2019

RNA editing is abundant and correlates with task performance in a social bumblebee

Porath, H. T., Hazan, E., Shpigler, H., Cohen, M., Band, M. R., Ben-Shahar, Y., Levanon, E. Y., Eisenberg, E. & Bloch, G., Dec 1 2019, In : Nature communications. 10, 1, 1605.

Research output: Contribution to journalArticle

Open Access
RNA Editing
editing
Task Performance and Analysis
Brain
Genetic Epigenesis
2017

Detection of copathogens in free-ranging eastern box turtles (Terrapene carolina carolina) in Illinois and Tennessee

Archer, G. A., Phillips, C. A., Adamovicz, L., Band, M. R., Byrd, J. & Allender, M. C., Dec 1 2017, In : Journal of Zoo and Wildlife Medicine. 48, 4, p. 1127-1134 8 p.

Research output: Contribution to journalArticle

Turtles
pathogens
Mycoplasma
Herpesviridae
Ranavirus
2016

Identification of the sex-determining region in flathead grey mullet (Mugil cephalus)

Dor, L., Shirak, A., Rosenfeld, H., Ashkenazi, I. M., Band, M. R., Korol, A., Ronin, Y., Seroussi, E., Weller, J. I. & Ron, M., Dec 1 2016, In : Animal genetics. 47, 6, p. 698-707 10 p.

Research output: Contribution to journalArticle

Smegmamorpha
Mugil cephalus
gender
Cichlids
chromosome mapping
2015

Erratum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax (Nature Communications (2015) 5 (3966) DOI: 10.1038/ncomms4966)

Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D., Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E. & 33 others, Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farré, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., Aug 12 2015, In : Nature communications. 6, 8051.

Research output: Contribution to journalComment/debate

Spalax
Mole Rats
genome
rats
communication
2014

Construction of a microsatellites-based linkage map for the white grouper (Epinephelus aeneus)

Dor, L., Shirak, A., Gorshkov, S., Band, M. R., Korol, A., Ronin, Y., Curzon, A., Hulata, G., Seroussi, E. & Ron, M., 2014, In : G3: Genes, Genomes, Genetics. 4, 8, p. 1455-1464 10 p.

Research output: Contribution to journalArticle

Cichlids
Microsatellite Repeats
Kelp
Synteny
Aquaculture

Corrigendum to "Living with stress: Regulation of antioxidant defense genes in the subterranean, hypoxia-tolerant mole rat, Spalax" [Gene 500, (2012) 199-206]

Schülke, S., Dreidax, D., Malik, A., Burmester, T., Nevo, E., Band, M. R., Avivi, A. & Hankeln, T., Mar 1 2014, In : Gene. 537, 1, 1 p.

Research output: Contribution to journalComment/debate

Spalax
Mole Rats
Antioxidants
Genes
corrigendum

Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax

Fang, X., Nevo, E., Han, L., Levanon, E. Y., Zhao, J., Avivi, A., Larkin, D., Jiang, X., Feranchuk, S., Zhu, Y., Fishman, A., Feng, Y., Sher, N., Xiong, Z., Hankeln, T., Huang, Z., Gorbunova, V., Zhang, L., Zhao, W., Wildman, D. E. & 33 others, Xiong, Y., Gudkov, A., Zheng, Q., Rechavi, G., Liu, S., Bazak, L., Chen, J., Knisbacher, B. A., Lu, Y., Shams, I., Gajda, K., Farré, M., Kim, J., Lewin, H. A., Ma, J., Band, M., Bicker, A., Kranz, A., Mattheus, T., Schmidt, H., Seluanov, A., Azpurua, J., McGowen, M. R., Ben Jacob, E., Li, K., Peng, S., Zhu, X., Liao, X., Li, S., Krogh, A., Zhou, X., Brodsky, L. & Wang, J., Jun 3 2014, In : Nature communications. 5, 3966.

Research output: Contribution to journalArticle

Spalax
Mole Rats
genome
rats
Rats

Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)

Eshel, O., Shirak, A., Dor, L., Band, M. R., Zak, T., Markovich-Gordon, M., Chalifa-Caspi, V., Feldmesser, E., Weller, J. I., Seroussi, E., Hulata, G. & Ron, M., Sep 9 2014, In : BMC genomics. 15, 1, 774.

Research output: Contribution to journalArticle

Cichlids
MicroRNAs
Embryonic Development
Tilapia
Genes

Molecular heterochrony and the evolution of sociality in bumblebees (Bombus terrestris)

Woodard, S. H., Bloch, G. M., Band, M. R. & Robinson, G. E., Feb 19 2014, In : Proceedings of the Royal Society B: Biological Sciences. 281, 1780, 20132419.

Research output: Contribution to journalArticle

Bombus terrestris
Molecular Evolution
Bombus
Genes
queen insects

They live in the land down under: Thyroid function and basal metabolic rate in the Blind Mole Rat, Spalax

Avivi, A., Nevo, E., Cohen, K., Sotnichenko, N., Hercbergs, A., Band, M. R., Davis, P. J., Ellis, M. & Ashur-Fabian, O., 2014, In : Endocrine Research. 39, 2, p. 80-85 6 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Basal Metabolism
Thyroid Gland
Hematocrit

Transcriptional profiling of the spleen in progressive visceral leishmaniasis reveals mixed expression of type 1 and type 2 cytokine-responsive genes

Espitia, C. M., Saldarriaga, O. A., Travi, B. L., Osorio, E. Y., Hernandez, A. G., Band, M. R., Patel, M. J., Medina, A. A., Cappello, M., Pekosz, A. & Melby, P. C., Nov 26 2014, In : BMC Immunology. 15, 1, 51.

Research output: Contribution to journalArticle

Visceral Leishmaniasis
Spleen
Cytokines
Cricetinae
Genes
2013

Gene expression profiling reveals the heterogeneous transcriptional activity of Oct3/4 and its possible interaction with Gli2 in mouse embryonic stem cells

Li, Y., Drnevich, J., Akraiko, T., Band, M. R., Li, D., Wang, F., Matoba, R. & Tanaka, T. S., Nov 1 2013, In : Genomics. 102, 5-6, p. 456-467 12 p.

Research output: Contribution to journalArticle

Gene Expression Profiling
Puromycin
Pluripotent Stem Cells
Genes
Venus

Pronounced cancer resistance in a subterranean rodent, the blind mole-rat, Spalax: In vivo and in vitro evidence

Manov, I., Hirsh, M., Iancu, T. C., Malik, A., Sotnichenko, N., Band, M. R., Avivi, A. & Shams, I., Aug 9 2013, In : BMC Biology. 11, 91.

Research output: Contribution to journalArticle

Spalax
Mole Rats
mole rats
rodent
Rats

Social regulation of maternal traits in nest-founding bumble bee (Bombus terrestris) queens

Woodard, S. H., Bloch, G., Band, M. R. & Robinson, G. E., Sep 1 2013, In : Journal of Experimental Biology. 216, 18, p. 3474-3482 9 p.

Research output: Contribution to journalArticle

Bombus terrestris
Bees
Bombus
bee
nest

Transcription pattern of p53-targeted DNA repair genes in the hypoxia-tolerant subterranean mole rat Spalax

Shams, I., Malik, A., Manov, I., Joel, A., Band, M. R. & Avivi, A., Apr 12 2013, In : Journal of Molecular Biology. 425, 7, p. 1111-1118 8 p.

Research output: Contribution to journalArticle

Targeted Gene Repair
Spalax
Mole Rats
DNA Repair
Cell Cycle Checkpoints
2012

Cross talk between S-nitrosylation and S-glutathionylation in control of the Na,K-ATPase regulation in hypoxic heart

Yakushev, S., Band, M., Tissot van Patot, M. C., Gassmann, M., Avivi, A. & Bogdanova, A., Dec 1 2012, In : American Journal of Physiology - Heart and Circulatory Physiology. 303, 11, p. H1332-H1343

Research output: Contribution to journalArticle

Spalax
Glutathione Disulfide
Catalytic Domain
Nitric Oxide
Oxidative Stress

Living with stress: Regulation of antioxidant defense genes in the subterranean, hypoxia-tolerant mole rat, Spalax

Schülke, S., Dreidax, D., Malik, A., Burmester, T., Nevo, E., Band, M. R., Avivi, A. & Hankeln, T., Jun 1 2012, In : Gene. 500, 2, p. 199-206 8 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Antioxidants
Genes
Hyperoxia
Spalax
Methionine Sulfoxide Reductases
Mole Rats
Rats
Oxygen

Transcriptional regulation of brain gene expression in response to a territorial intrusion

Sanogo, Y. O., Band, M., Blatti, C., Sinha, S. & Bell, A. M., 2012, In : Proceedings of the Royal Society B: Biological Sciences. 279, 1749, p. 4929-4938 10 p.

Research output: Contribution to journalArticle

Gene Expression Regulation
Gene expression
gene expression
brain
Brain

Transcriptome analysis of the spalax hypoxia survival response includes suppression of apoptosis and tight control of angiogenesis

Malik, A., Korol, A., Weber, M., Hankeln, T., Avivi, A. & Band, M. R., Nov 13 2012, In : BMC genomics. 13, 1, 615.

Research output: Contribution to journalArticle

Spalax
Gene Expression Profiling
Apoptosis
Genes
Hypoxia

Whole-genome resequencing of two elite sires for the detection of haplotypes under selection in dairy cattle

Larkin, D. M., Daetwyler, H. D., Hernandez, A. G., Wright, C. L., Hetrick, L. A., Boucek, L., Bachman, S. L., Band, M. R., Akraiko, T. V., Cohen-Zinder, M., Thimmapuram, J., Macleod, I. M., Harkins, T. T., McCague, J. E., Goddard, M. E., Hayes, B. J. & Lewin, H. A., May 15 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 20, p. 7693-7698 6 p.

Research output: Contribution to journalArticle

Haplotypes
Single Nucleotide Polymorphism
Genome
Dairying
Alleles
2011

Brain transcriptomic response of threespine sticklebacks to cues of a predator.

Sanogo, Y. O., Hankison, S., Band, M. R., Obregon, A. & Bell, A. M., 2011, In : Brain, behavior and evolution. 77, 4, p. 270-285 16 p.

Research output: Contribution to journalArticle

Smegmamorpha
Cues
Brain
Antigen Presentation
Long-Term Synaptic Depression

Characterization of paternity relationships in the mole rat Spalax ehrenbergi by microsatellite genotyping

Malik, A., Frenkel, Z., Hernandez, A. G., Band, M. R., Nevo, E. & Avivi, A., Jul 1 2011, In : Population Ecology. 53, 3, p. 501-510 10 p.

Research output: Contribution to journalArticle

Spalax
mole rats
paternity
genotyping
microsatellite repeats

Chimaerism detection in bovine twins, triplets and quadruplets using sex chromosome-linked markers

Ron, M., Porat, B., Band, M. R. & Weller, J. I., Apr 1 2011, In : Animal genetics. 42, 2, p. 208-211 4 p.

Research output: Contribution to journalArticle

Sex Chromosomes
chimerism
sex chromosomes
Genetic Markers
Y Chromosome

Gene Expression is Highly Regulated in Early Developing Fruit of Apple

Soria-Guerra, R. E., Rosales-Mendoza, S., Gasic, K., Wisniewski, M. E., Band, M. R. & Korban, S. S., Dec 1 2011, In : Plant Molecular Biology Reporter. 29, 4, p. 885-897 13 p.

Research output: Contribution to journalArticle

Malus
Fruit
apples
Gene Expression
gene expression

Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: Utility and potential for the discovery of novel evolutionary patterns

Malik, A., Korol, A., Hübner, S., Hernandez, A. G., Thimmapuram, J., Ali, S., Glaser, F., Paz, A., Avivi, A. & Band, M., Aug 18 2011, In : PloS one. 6, 8, e21227.

Research output: Contribution to journalArticle

Spalax
Mole Rats
mole rats
transcriptomics
Transcriptome
2010

Mammalian target of rapamycin regulates miRNA-1 and follistatin in skeletal myogenesis

Sun, Y., Ge, Y., Drnevich, J., Zhao, Y., Band, M. & Chen, J., Jun 28 2010, In : Journal of Cell Biology. 189, 7, p. 1157-1169 13 p.

Research output: Contribution to journalArticle

Follistatin
Muscle Development
Sirolimus
MicroRNAs
Histone Deacetylase 1

The expression of p53-target genes in the hypoxia-tolerant subterranean mole-rat is hypoxia-dependent and similar to expression patterns in solid tumors

Band, M. R., Ashur-Fabian, O. & Avivi, A., Aug 15 2010, In : Cell Cycle. 9, 16, p. 3347-3352 6 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
p53 Genes
Neoplasms
Messenger RNA
Spalax
Mole Rats
Ankyrin Repeat
ankyrins
mole rats
2009

Adaptive features of skeletal muscles of mole rats (Spalax ehrenbergi) to intensive activity under subterranean hypoxic conditions

Avivi, A., Band, M., Joel, A., Shenzer, P. & Coleman, R., Sep 1 2009, In : Acta Histochemica. 111, 5, p. 415-419 5 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Skeletal Muscle
Neck Muscles
Muscles

Diversity and strain specificity of plant cell wall degrading enzymes revealed by the draft genome of Ruminococcus flavefaciens FD-1

Berg Miller, M. E., Antonopoulos, D. A., Rincon, M. T., Band, M., Bari, A., Akraiko, T., Hernandez, A., Thimmapuram, J., Henrissat, B., Coutinho, P. M., Borovok, I., Jindou, S., Lamed, R., Flint, H. J., Bayer, E. A. & White, B. A., Aug 14 2009, In : PloS one. 4, 8, e6650.

Research output: Contribution to journalArticle

Ruminococcus
Ruminococcus flavefaciens
Plant Cells
cellulosome
Cellulosomes

Hypoxia-induced BNIP3 expression and mitophagy: In vivo comparison of the rat and the hypoxia-tolerant mole rat, Spalax ehrenbergi

Band, M. R., Joel, A., Hernandez, A. G. & Avivi, A., Jul 1 2009, In : FASEB Journal. 23, 7, p. 2327-2335 9 p.

Research output: Contribution to journalArticle

Spalax
Mitochondrial Degradation
Mole Rats
Muscle
Rats

Seasonal differences of gene expression profiles in song sparrow (melospiza melodia) hypothalamus in relation to territorial aggression

Mukai, M., Replogle, K., Drnevich, J., Wang, G., Wacker, D., Band, M., Clayton, D. F. & Wingfield, J. C., Dec 1 2009, In : PloS one. 4, 12, e8182.

Research output: Contribution to journalArticle

Sparrows
Passeriformes
Music
hypothalamus
Aggression
2008

Cloning and in vivo expression of vascular endothelial growth factor receptor 2 (Flk1) in the naturally hypoxia-tolerant subterranean mole rat

Band, M., Shams, I., Joel, A. & Avivi, A., Jan 1 2008, In : FASEB Journal. 22, 1, p. 105-112 8 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Vascular Endothelial Growth Factor Receptor-2
Vascular Endothelial Growth Factor Receptor
Cloning

The Songbird Neurogenomics (SoNG) Initiative: Community-based tools and strategies for study of brain gene function and evolution

Replogle, K., Arnold, A. P., Ball, G. F., Band, M. R., Bensch, S., Brenowitz, E. A., Dong, S., Drnevich, J., Ferris, M., George, J. M., Gong, G., Hasselquist, D., Hernandez, A. G., Kim, R., Lewin, H. A., Liu, L., Lovell, P. V., Mello, C. V., Naurin, S., Rodriguez-Zas, S. L. & 3 others, Thimmapuram, J., Wade, J. & Clayton, D. F., Mar 18 2008, In : BMC genomics. 9, 134.

Research output: Contribution to journalArticle

Songbirds
Finches
Brain
Equidae
Genes
2007

Characterization of an EST database for the perennial weed leafy spurge: An important resource for weed biology research

Anderson, J. V., Horvath, D. P., Chao, W. S., Foley, M. E., Hernandez, A. G., Thimmapuram, J., Liu, L., Gong, G. L., Band, M., Kim, R. & Mikel, M. A., May 1 2007, In : Weed Science. 55, 3, p. 193-203 11 p.

Research output: Contribution to journalArticle

weed biology
Euphorbia esula
perennial weeds
expressed sequence tags
unigenes

Discovery and characterization of 91 novel transcripts expressed in cattle placenta

Kumar, C. G., Larson, J. H., Band, M. R. & Lewin, H. A., May 9 2007, In : BMC genomics. 8, 113.

Research output: Contribution to journalArticle

Placenta
Genes
Ruminants
Genome
Mammals

Dosage compensation is less effective in birds than in mammals

Itoh, Y., Melamed, E., Yang, X., Kampf, K., Wang, S., Yehya, N., Van Nas, A., Replogle, K., Band, M. R., Clayton, D. F., Schadt, E. E., Lusis, A. J. & Arnold, A. P., Mar 29 2007, In : Journal of Biology. 6, 1, 2.

Research output: Contribution to journalArticle

Mammals
Birds
Genes
Sex Chromosomes
mammals

Transcriptome profiling of the small intestinal epithelium in germfree versus conventional piglets

Chowdhury, S. R., King, D. E., Willing, B. P., Band, M. R., Beever, J. E., Lane, A. B., Loor, J. J., Marini, J. C., Rund, L. A., Schook, L. B., Van Kessel, A. G. & Gaskins, H. R., Jul 5 2007, In : BMC genomics. 8, 215.

Research output: Contribution to journalArticle

Gene Expression Profiling
T Cell Transcription Factor 1
Intestinal Mucosa
Microbiota
Inflammation
2006

Accelerated expansion of group IID-like phospholipase A2 genes in Bos taurus

Golik, M., Cohen-Zinder, M., Loor, J. J., Drackley, J. K., Band, M. R., Lewin, H. A., Weller, J. I., Ron, M. & Seroussi, E., Apr 1 2006, In : Genomics. 87, 4, p. 527-533 7 p.

Research output: Contribution to journalArticle

Group II Phospholipases A2
Exons
Genes
Genome
Satellite DNA

Characterization of gene expression profiles of normal canine retina and brain using a retinal cDNA microarray

Paez, G. L., Sellers, K. F., Band, M. R., Acland, G. M., Zangerl, B. & Aguirre, G. D., Sep 7 2006, In : Molecular Vision. 12, p. 1048-1056 9 p.

Research output: Contribution to journalArticle

Oligonucleotide Array Sequence Analysis
Transcriptome
Retina
Canidae
Brain

Differential expression profiling of the blind subterranean mole rat Spalax ehrenbergi superspecies: Bioprospecting for hypoxia tolerance

Avivi, A., Brodsky, L., Nevo, E. & Band, M. R., Oct 11 2006, In : Physiological genomics. 27, 1, p. 54-64 11 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Oxygen
Cysteine
Activating Transcription Factor 3

Discovery of eight novel divergent homologs expressed in cattle placenta

Larson, J. H., Kumar, C. G., Everts, R. E., Green, C. A., Everts-van Der Wind, A., Band, M. R. & Lewin, H. A., May 16 2006, In : Physiological genomics. 25, 3, p. 405-413 9 p.

Research output: Contribution to journalArticle

Placenta
Genes
Expressed Sequence Tags
Trophoblasts
Cerebrum
2005

A 7872 cDNA microarray and its use in bovine functional genomics

Everts, R. E., Band, M. R., Liu, Z. L., Kumar, C. G., Liu, L., Loor, J. J., Oliveira, R. & Lewin, H. A., May 15 2005, In : Veterinary Immunology and Immunopathology. 105, 3-4, p. 235-245 11 p.

Research output: Contribution to journalArticle

Gene Ontology
Genomics
Oligonucleotide Array Sequence Analysis
genomics
cattle

A study of inter-lab and inter-platform agreement of DNA microarray data

Wang, H., He, X., Band, M. R., Wilson, C. & Liu, L., May 11 2005, In : BMC genomics. 6

Research output: Contribution to journalArticle

Oligonucleotide Array Sequence Analysis
Technology
RNA
Benchmarking
Transcriptome

Evolutionary regulation of the blind subterranean mole rat, Spalax, revealed by genome-wide gene expression

Brodsky, L. I., Jacob-Hirsch, J., Avivi, A., Trakhtenbrot, L., Zeligson, S., Amariglio, N., Paz, A., Korol, A. B., Band, M., Rechavi, G. & Nevo, E., Nov 22 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 47, p. 17047-17052 6 p.

Research output: Contribution to journalArticle

Spalax
Mole Rats
Genome
Gene Expression
Kidney

Identification of a missense mutation in the bovine ABCG2 gene with a major effect on the QTL on chromosome 6 affecting milk yield and composition in Holstein cattle

Cohen-Zinder, M., Seroussi, E., Larkin, D. M., Loor, J. J., Everts-Van Der Wind, A., Lee, J. H., Drackley, J. K., Band, M. R., Hernandez, A. G., Shani, M., Lewin, H. A., Weller, J. I. & Ron, M., Jul 1 2005, In : Genome Research. 15, 7, p. 936-944 9 p.

Research output: Contribution to journalArticle

Chromosomes, Human, Pair 6
Quantitative Trait Loci
Missense Mutation
Milk
Fats
Overlapping Genes
Peroxisome Proliferators
Peroxisome Proliferator-Activated Receptors
Clofibric Acid
Fasting
2004

27-Hydroxycholesterol inhibits neutral sphingomyelinase in cultured human endothelial cells

Zhou, Q., Band, M. R., Hernandez, A., Liu, Z. L. & Kummerow, F. A., Aug 13 2004, In : Life Sciences. 75, 13, p. 1567-1577 11 p.

Research output: Contribution to journalArticle

Sphingomyelin Phosphodiesterase
Endothelial cells
Endothelial Cells
Sphingomyelins
27-hydroxycholesterol