Juan David Arbelaez

20102019
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Research Output 2010 2019

2019

1k-RiCA (1K-Rice Custom Amplicon) a novel genotyping amplicon-based SNP assay for genetics and breeding applications in rice

Arbelaez, J. D., Dwiyanti, M. S., Tandayu, E., Llantada, K., Jarana, A., Ignacio, J. C., Platten, J. D., Cobb, J., Rutkoski, J. E., Thomson, M. J. & Kretzschmar, T., Dec 1 2019, In : Rice. 12, 1, 55.

Research output: Contribution to journalArticle

Open Access
genotyping
rice
breeding
assay
assays

Enhancing the rate of genetic gain in public-sector plant breeding programs: lessons from the breeder’s equation

Cobb, J. N., Juma, R. U., Biswas, P. S., Arbelaez, J. D., Rutkoski, J., Atlin, G., Hagen, T., Quinn, M. & Ng, E. H., Mar 1 2019, In : Theoretical and Applied Genetics. 132, 3, p. 627-645 19 p.

Research output: Contribution to journalReview article

Open Access
public sector
Public Sector
plant breeding
genetic improvement
Breeding

Methodology: ssb-MASS: a single seed-based sampling strategy for marker-assisted selection in rice

Arbelaez, J. D., Tandayu, E., Reveche, M. Y., Jarana, A., Van Rogen, P., Sandager, L., Stolt, P., Ng, E., Varshney, R. K., Kretzschmar, T. & Cobb, J., Jul 24 2019, In : Plant Methods. 15, 1, 78.

Research output: Contribution to journalArticle

Open Access
marker-assisted selection
Seeds
rice
seeds
Breeding
2017

ALUMINUM RESISTANCE TRANSCRIPTION FACTOR 1 (ART1) contributes to natural variation in aluminum resistance in diverse genetic backgrounds of rice (O. sativa)

Arbelaez, J. D., Maron, L. G., Jobe, T. O., Piñeros, M. A., Famoso, A. N., Rebelo, A. R., Singh, N., Ma, Q., Fei, Z., Kochian, L. V. & McCouch, S. R., Jan 1 2017, In : Plant Direct. 1, 4, e00014.

Research output: Contribution to journalArticle

Open Access
R Factors
Aluminum
genetic background
aluminum
Transcription Factors
2016

Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon

Ogawa, S., Valencia, M. O., Lorieux, M., Arbelaez, J. D., McCouch, S., Ishitani, M. & Selvaraj, M. G., Apr 1 2016, In : Acta Physiologiae Plantarum. 38, 4, 103.

Research output: Contribution to journalArticle

Oryza rufipogon
wild rice
substitution lines
agronomic traits
quantitative trait loci
2015

Development and GBS-genotyping of introgression lines (ILs) using two wild species of rice, O. meridionalis and O. rufipogon, in a common recurrent parent, O. sativa cv. Curinga

Arbelaez, J. D., Moreno, L. T., Singh, N., Tung, C. W., Maron, L. G., Ospina, Y., Martinez, C. P., Grenier, C., Lorieux, M. & McCouch, S., Jan 1 2015, In : Molecular Breeding. 35, 2

Research output: Contribution to journalArticle

Open Access
introgression
genotyping
Genome
rice
Oryza rufipogon
2014

N- and P-mediated seminal root elongation response in rice seedlings

Ogawa, S., Selvaraj, M. G., Fernando, A. J., Lorieux, M., Ishitani, M., McCouch, S. & Arbelaez, J. D., Feb 1 2014, In : Plant and Soil. 375, 1-2, p. 303-315 13 p.

Research output: Contribution to journalArticle

root growth
rice
seedling
seedlings
quantitative trait loci
2010

A universal core genetic map for rice

Orjuela, J., Garavito, A., Bouniol, M., Arbelaez, J. D., Moreno, L., Kimball, J., Wilson, G., Rami, J. F., Tohme, J., McCouch, S. R. & Lorieux, M., Jan 1 2010, In : Theoretical and Applied Genetics. 120, 3, p. 563-572 10 p.

Research output: Contribution to journalArticle

rice
Oryza sativa
microsatellite repeats
Microsatellite Repeats
Oryza barthii