19982019
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Research Output 1998 2019

2019

A proposal for determining the evidence types of biomedical documents using a drug-drug interaction ontology and machine learning

Hoang, L., Boyce, R. D., Brochhausen, M., Utecht, J. & Schneider, J. A., Jan 1 2019, In : CEUR Workshop Proceedings. 2350

Research output: Contribution to journalConference article

Drug interactions
Ontology
Learning systems

Confirm or refute? A comparative study on citation sentiment classification in clinical research publications

Kilicoglu, H., Peng, Z., Tafreshi, S., Tran, T., Rosemblat, G. & Schneider, J. A., Mar 1 2019, In : Journal of Biomedical Informatics. 91, 103123.

Research output: Contribution to journalArticle

Publications
Neural Networks (Computer)
Neural networks
Hand
Research

Identifying common methods used by drug interaction experts for finding evidence about potential drug-drug interactions: Web-based survey

Grizzle, A. J., Horn, J., Collins, C., Schneider, J. A., Malone, D. C., Stottlemyer, B. & Boyce, R. D., Jan 1 2019, In : Journal of Medical Internet Research. 21, 1, e11182.

Research output: Contribution to journalReview article

Drug Interactions
Pharmaceutical Preparations
Knowledge Bases
Surveys and Questionnaires
Databases
2018

Argumentation Mining

Stede, M. & Schneider, J. A., Dec 20 2018, Synthesis Lectures on Human Language Technologies: Lecture #39. 2 ed. Morgan and Claypool Publishers, p. 1-191 191 p. (Synthesis Lectures on Human Language Technologies; vol. 11, no. 2).

Research output: Chapter in Book/Report/Conference proceedingChapter

argumentation
Linguistics
linguistics
subjectivity
Processing

Cochrane Review as a “Warranting Device” for Reasoning About Health

Jackson, S. A. & Schneider, J. A., Jun 1 2018, In : Argumentation. 32, 2, p. 241-272 32 p.

Research output: Contribution to journalArticle

expert
health
relativism
immunity
invention
Randomized Clinical Trial
Inference Rules
Patents and inventions
invention
Health

Opportunities for computer support for systematic reviewing - A gap analysis

Hoang, L. & Schneider, J. A., Jan 1 2018, Transforming Digital Worlds - 13th International Conference, iConference 2018, Proceedings. Chowdhury, G., McLeod, J., Gillet, V. & Willett, P. (eds.). Springer-Verlag, p. 367-377 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10766 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Literature Review
Review
Face
Evidence

Testing a citation and text-based framework for retrieving publications for literature reviews

Sarol, M. J., Liu, L. & Schneider, J. A., Jan 1 2018, In : CEUR Workshop Proceedings. 2080, p. 22-33 12 p.

Research output: Contribution to journalConference article

Testing
Seed
2017

Agreeing to disagree: Reconciling conflicting taxonomic views using a logic-based approach

Cheng, Y. Y., Franz, N., Schneider, J. A., Yu, S., Rodenhausen, T. & Ludaescher, B., Jan 1 2017, In : Proceedings of the Association for Information Science and Technology. 54, 1, p. 46-56 11 p.

Research output: Contribution to journalArticle

Taxonomies
logic
taxonomy
Interoperability
Semantics

Argumentation devices in reasoning about health

Jackson, S. A. & Schneider, J. A., 2017, In : CEUR Workshop Proceedings. 1876, p. 49-53 5 p.

Research output: Contribution to journalArticle

Health

Formalizing evidence type definitions for drug-drug interaction studies to improve evidence base curation

Utecht, J., Brochhausen, M., Judkins, J., Schneider, J. A. & Boyce, R. D., Jan 1 2017, MEDINFO 2017: Precision Healthcare through Informatics - Proceedings of the 16th World Congress on Medical and Health Informatics. Dongsheng, Z., Gundlapalli, A. V. & Marie-Christine, J. (eds.). IOS Press, p. 960-964 5 p. (Studies in Health Technology and Informatics; vol. 245).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Drug interactions
Drug Interactions
Ontology
Pharmaceutical Preparations
Knowledge Bases

Informatics support for basic research in biomedicine

Rindflesch, T. C., Blake, C. L., Fiszman, M., Kilicoglu, H., Rosemblat, G., Schneider, J. A. & Zeiss, C. J., Jul 1 2017, In : ILAR Journal. 58, 1, p. 80-89 10 p., ilx004.

Research output: Contribution to journalArticle

Informatics
MEDLINE
Biomedical Research
Semantics
PubMed

Logic-based schema alignment for natural history museum databasest

Thomer, A., Cheng, Y. Y., Schneider, J. A., Twidale, M. B. & Ludaescher, B., Jan 1 2017, In : Knowledge Organization. 44, 7, p. 545-558 14 p.

Research output: Contribution to journalReview article

logic
museum
history
migration
organization

Stance classification of twitter debates: The encryption debate as a use case

Addawood, A., Schneider, J. A. & Bashir, M. N., Jul 28 2017, 8th International Conference on Social Media and Society: Social Media for Good or Evil, #SMSociety 2017. Association for Computing Machinery, 3097288. (ACM International Conference Proceeding Series; vol. Part F129683).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cryptography
National security
Syntactics
Learning systems
2016

Adding evidence type representation to DIDEO

Brochhausen, M., Hogan, W. R., Empey, P. E., Schneider, J. A. & Boyce, R. D., Jan 1 2016, In : CEUR Workshop Proceedings. 1747

Research output: Contribution to journalConference article

Drug interactions
Ontology
Foundries
2015

Formalizing knowledge and evidence about potential drug-drug interactions

Schneider, J. A., Brochhausen, M., Rosko, S., Ciccarese, P., Hogan, W. R., Malone, D., Ning, Y., Clark, T. & Boyce, R. D., Jan 1 2015, In : CEUR Workshop Proceedings. 1428

Research output: Contribution to journalConference article

Drug interactions
2014

Accept, decline, postpone: How newcomer productivity is reduced in English Wikipedia by pre-publication review

Schneider, J. A., Halfaker, A. & Gelley, B. S., Jan 1 2014, Proceedings of the 10th International Symposium on Open Collaboration, OpenSym 2014. Association for Computing Machinery, Inc, p. F3 (Proceedings of the 10th International Symposium on Open Collaboration, OpenSym 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Productivity
Quality assurance

An informatics perspective on argumentation mining

Schneider, J. A., Jan 1 2014, In : CEUR Workshop Proceedings. 1341

Research output: Contribution to journalConference article

Knowledge representation

Towards a foundational representation of potential drug-drug interaction knowledge

Brochhausen, M., Schneider, J. A., Malone, D., Empey, P. E., Hogan, W. R. & Boyce, R. D., Jan 1 2014, In : CEUR Workshop Proceedings. 1309, p. 16-31 16 p.

Research output: Contribution to journalConference article

Drug interactions
Physiology
Terminology
Ontology

Unifying the Shift and Narrow strategies in Focus+Context exploratory search

Samp, K., Beuzit, C. & Schneider, J. A., Sep 27 2014, SIGDOC 2014 - Proceedings of the 32nd Annual International Conference on the Design of Communication. Association for Computing Machinery, Inc, 2666228. (SIGDOC 2014 - Proceedings of the 32nd Annual International Conference on the Design of Communication).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

User interfaces

Using the Micropublications ontology and the Open Annotation Data Model to represent evidence within a drug-drug interaction knowledge base

Schneider, J. A., Ciccarese, P., Clark, T. & Boyce, R. D., Jan 1 2014, In : CEUR Workshop Proceedings. 1282, p. 60-70 11 p.

Research output: Contribution to journalConference article

Drug interactions
Ontology
Data structures
Semantic Web
Knowledge representation
2013

A review of argumentation for the Social Semantic Web

Schneider, J. A., Groza, T. & Passant, A., Jan 1 2013, In : Semantic Web. 4, 2, p. 159-218 60 p.

Research output: Contribution to journalReview article

Semantic Web
World Wide Web
Ontology

Arguments about deletion: How experience improves the acceptability of arguments in ad-hoc online task groups

Schneider, J. A., Samp, K., Passant, A. & Decker, S., Mar 18 2013, CSCW 2013 - Proceedings of the 2013 ACM Conference on Computer Supported Cooperative Work. p. 1069-1079 11 p. (Proceedings of the ACM Conference on Computer Supported Cooperative Work, CSCW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decision making
Open source software

Dynamic enhancement of drug product labels to support drug safety, efficacy, and effectiveness

Boyce, R. D., Horn, J. R., Hassanzadeh, O., Waard, A. D., Schneider, J. A., Luciano, J. S., Rastegar-Mojarad, M. & Liakata, M., Jan 26 2013, In : Journal of Biomedical Semantics. 4, 1, 5.

Research output: Contribution to journalArticle

Drug products
Drug interactions
Labels
Safety
Pharmaceutical Preparations

Linked data for digital libraries

Bojars, U., Lopes, N. & Schneider, J. A., Oct 3 2013, Research and Advanced Technology for Digital Libraries - International Conference on Theory and Practice of Digital Libraries, TPDL 2013, Proceedings. p. 492-493 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8092 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Linked Data
Digital libraries
Digital Libraries
Work Flow
Necessary
2012

Alternative interfaces for deletion discussions in Wikipedia: Some proposals using decision factors

Schneider, J. A. & Samp, K., Dec 1 2012, WikiSym 2012 Conference Proceedings - 8th Annual International Symposium on Wikis and Open Collaboration. (WikiSym 2012 Conference Proceedings - 8th Annual International Symposium on Wikis and Open Collaboration).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Friction

Arguing from a point of view

Wyner, A. & Schneider, J. A., Dec 1 2012, In : CEUR Workshop Proceedings. 918, p. 153-167 15 p.

Research output: Contribution to journalConference article

Blogs
Websites

Building a standpoints web to support decision-making in Wikipedia

Schneider, J. A., Mar 19 2012, CSCW'12 - Proceedings of the ACM 2012 Conference on Computer Supported Cooperative Work Companion. p. 335-338 4 p. (Proceedings of the ACM Conference on Computer Supported Cooperative Work, CSCW).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decision making

Deletion discussions in Wikipedia: Decision factors and outcomes

Schneider, J. A., Passant, A. & Decker, S., Dec 1 2012, WikiSym 2012 Conference Proceedings - 8th Annual International Symposium on Wikis and Open Collaboration. (WikiSym 2012 Conference Proceedings - 8th Annual International Symposium on Wikis and Open Collaboration).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Factor analysis

Dimensions of argumentation in social media

Schneider, J. A., Davis, B. & Wyner, A., Oct 25 2012, Knowledge Engineering and Knowledge Management - 18th International Conference, EKAW 2012, Proceedings. p. 21-25 5 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7603 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Social Media
Argumentation
Processing
Industry
Alternatives

Formalising uncertainty: An ontology of reasoning, certainty and attribution (ORCA)

De Waard, A. & Schneider, J. A., Jan 1 2012, In : CEUR Workshop Proceedings. 930, p. 8-15 8 p.

Research output: Contribution to journalConference article

Ontology
Uncertainty

Identifying consumers' arguments in text

Schneider, J. A. & Wyner, A., Dec 1 2012, In : CEUR Workshop Proceedings. 925, p. 31-42 12 p.

Research output: Contribution to journalConference article

Terminology

Semi-automated argumentative analysis of online product reviews

Wyner, A., Schneider, J. A., Atkinson, K. & Bench-Capon, T., Jan 1 2012, Computational Models of Argument - Proceedings of COMMA 2012. 1 ed. IOS Press, p. 43-50 8 p. (Frontiers in Artificial Intelligence and Applications; vol. 245, no. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Terminology
Cameras
2010

Argumentation 3.0: How Semantic Web technologies can improve argumentation modeling in Web 2.0 environments

Schneider, J. A., Passant, A., Groza, T. & Breslin, J. G., Jan 1 2010, Computational Models of Argument. IOS Press, p. 439-446 8 p. (Frontiers in Artificial Intelligence and Applications; vol. 216).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Semantic Web
Bulletin boards
Blogs
Interoperability

A semantic framework for modelling quotes in email conversations

Passant, A., Zimmermann, A., Schneider, J. A. & Breslin, J. G., Dec 1 2010, Proceedings of the 1st ACM Jordan Professional Chapter ISWSA Annual - International Conference on Intelligent Semantic Web-Services and Applications, ISWSA'10. 1874601. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Electronic mail
Semantics
Bulletin boards
Semantic Web

Enhancing MediaWiki Talk pages with semantics for better coordination A proposal

Schneider, J. A., Passant, A. & Breslin, J. G., Jan 1 2010, In : CEUR Workshop Proceedings. 632, p. 122-131 10 p.

Research output: Contribution to journalConference article

Ontology
Semantics
1998

Stick knots

Furstenberg, E., Li, J. & Schneider, J. A., Jan 1 1998, In : Chaos, solitons and fractals. 9, 4-5, p. 561-568 8 p.

Research output: Contribution to journalArticle

Knot
Lower bound
Continued fraction
Notation
Upper bound