1986 …2019
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Research Output 1986 2019

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Review article
2019

Emergence of Hierarchical Modularity in Evolving Networks Uncovered by Phylogenomic Analysis

Caetano-Anolles, G., Aziz, M. F., Mughal, F., Gräter, F., Koç, I., Caetano-Anollés, K. & Caetano-Anollés, D., Jan 1 2019, In : Evolutionary Bioinformatics. 15

Research output: Contribution to journalReview article

Open Access
Metabolomics
Metabolic Networks and Pathways
Transcriptome
Proteins
protein
2018

Archaea-First and the Co-Evolutionary Diversification of Domains of Life

Staley, J. T. & Caetano-Anolles, G., Aug 1 2018, In : BioEssays. 40, 8, 1800036.

Research output: Contribution to journalReview article

Archaea
Bacteria
Cells
Eukaryota
Methane

Evolution of macromolecular structure: a 'double tale' of biological accretion and diversification

Caetano-Anollés, D., Caetano-Anollés, K. & Caetano-Anolles, G., Oct 1 2018, In : Science progress. 101, 4, p. 360-383 24 p.

Research output: Contribution to journalReview article

Genomics
Nucleic Acids
Growth
Proteins

Rooting Phylogenies and the Tree of Life While Minimizing Ad Hoc and Auxiliary Assumptions

Caetano-Anolles, G., Nasir, A., Kim, K. M. & Caetano-Anollés, D., Oct 1 2018, In : Evolutionary Bioinformatics. 14

Research output: Contribution to journalReview article

Phylogeny
rooting
phylogeny
Biological Evolution
Data storage equipment
2017

Long-term evolution of viruses: A Janus-faced balance

Nasir, A., Kim, K. M. & Caetano-Anolles, G., Aug 1 2017, In : BioEssays. 39, 8, 1700026.

Research output: Contribution to journalReview article

Long Term Evolution (LTE)
Viruses
Virus Latency
Symbiosis
Metagenomics

Mimivirus: Leading the way in the discovery of giant viruses of amoebae

Colson, P., La Scola, B., Levasseur, A., Caetano-Anolles, G. & Raoult, D., Mar 13 2017, In : Nature Reviews Microbiology. 15, 4, p. 243-254 12 p.

Research output: Contribution to journalReview article

Mimiviridae
Amoeba
Viruses
Virus Internalization
Virology
2016

Arguments Reinforcing the Three-Domain View of Diversified Cellular Life

Nasir, A., Kim, K. M., Da Cunha, V. & Caetano-Anolles, G., Jan 1 2016, In : Archaea. 2016, 1851865.

Research output: Contribution to journalReview article

Eukaryota
ancestry
Phylogeny
eukaryote
domain structure
2015
Synthetic Biology
Ribosomes
Censuses
Proteins
Macromolecules
2014

Archaea: The first domain of diversified life

Caetano-Anolles, G., Nasir, A., Zhou, K., Caetano-Anollés, D., Mittenthal, J. E., Sun, F. J. & Kim, K. M., Jan 1 2014, In : Archaea. 2014, 590214.

Research output: Contribution to journalReview article

Archaea
origin of life
phylogenetics
phylogeny
molecular models
2010
Protein Stability
Thermodynamics
Assays
Mutation
Free energy
2009

The origin, evolution and structure of the protein world

Caetano-Anolles, G., Wang, M., Caetano-Anollés, D. & Mittenthal, J. E., Feb 1 2009, In : Biochemical Journal. 417, 3, p. 621-637 17 p.

Research output: Contribution to journalReview article

Proteome
Proteins
Protein folding
Prebiotics
Biochemistry

The origin and evolution of modern metabolism

Caetano-Anolles, G., Mainzer, L. S., Gee, H., Caetano-Anollés, D., Kim, H. S. & Mittenthal, J. E., Feb 1 2009, In : International Journal of Biochemistry and Cell Biology. 41, 2, p. 285-297 13 p.

Research output: Contribution to journalReview article

Metabolism
Enzymes
Genomics
Nucleotides
Prebiotics
2003

An evolutionarily structural universe of protein architecture

Caetano-Anolles, G. & Caetano-Anollés, D., Jul 1 2003, In : Genome Research. 13, 7, p. 1563-1571 9 p.

Research output: Contribution to journalReview article

Phylogeny
Proteins
Proteome
Archaea
Eukaryota
2001

Novel strategies to study the role of mutation and nucleic acid structure in evolution

Caetano-Anolles, G., Oct 29 2001, In : Plant Cell, Tissue and Organ Culture. 67, 2, p. 115-132 18 p.

Research output: Contribution to journalReview article

Thermodynamics
thermodynamics
Nucleic Acids
nucleic acids
mutation
1998

DNA analysis of turfgrass genetic diversity

Caetano-Anolles, G., Jan 1 1998, In : Crop Science. 38, 6, p. 1415-1424 10 p.

Research output: Contribution to journalReview article

turf grasses
genetic variation
nucleic acids
DNA
cultivars
1991

DNA amplification fingerprinting: A strategy for genome analysis

Caetano-Anolles, G., Bassam, B. J. & Gresshoff, P. M., Nov 1 1991, In : Plant Molecular Biology Reporter. 9, 4, p. 294-307 14 p.

Research output: Contribution to journalReview article

DNA Fingerprinting
Genome
genome
DNA
Silver Staining

Plant genetic control of nodulation

Caetano-Anolles, G. & Gresshoff, P. M., Jan 1 1991, In : Annual review of microbiology. 45, p. 345-382 38 p.

Research output: Contribution to journalReview article

Rhizobiaceae
Bradyrhizobium
Nitrogen Fixation
Rhizobium
Symbiosis