Erik J Sacks

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Research Output

Article

A footprint of past climate change on the diversity and population structure of Miscanthus sinensis

Clark, L. V., Brummer, J. E., Głowacka, K., Hall, M. C., Heo, K., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Jul 2014, In : Annals of botany. 114, 1, p. 97-107 11 p.

Research output: Contribution to journalArticle

Antisense-overexpression of the MsCOMT gene induces changes in lignin and total phenol contents in transgenic tobacco plants

Seong, E. S., Yoo, J. H., Lee, J. G., Kim, H. Y., Hwang, I. S., Heo, K., Kim, J. K., Lim, J. D., Sacks, E. J. & Yu, C. Y., Feb 1 2013, In : Molecular Biology Reports. 40, 2, p. 1979-1986 8 p.

Research output: Contribution to journalArticle

Application of visible and near-infrared spectroscopy to classification of Miscanthus species

Jin, X., Chen, X., Xiao, L., Shi, C., Chen, L., Yu, B., Yi, Z., Yoo, J. H., Heo, K., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Mar 2017, In : PloS one. 12, 4, e0171360.

Research output: Contribution to journalArticle

Assessing genetic diversity in Gossypium arboreum L. cultivars using genomic and EST-derived microsatellites

Kantartzi, S. K., Ulloa, M., Sacks, E. & Stewart, J. M. D., May 1 2009, In : Genetica. 136, 1, p. 141-147 7 p.

Research output: Contribution to journalArticle

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Oct 1 2019, In : GCB Bioenergy. 11, 10, p. 1125-1145 21 p.

Research output: Contribution to journalArticle

Open Access

Breeding for perennial growth and fertility in an Oryza sativa/O. longistaminata population

Sacks, E. J., Dhanapala, M. P., Tao, D. Y., Sta. Cruz, M. T. & Sallan, R., Jan 8 2006, In : Field Crops Research. 95, 1, p. 39-48 10 p.

Research output: Contribution to journalArticle

Breeding progress and preparedness for mass-scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar

Clifton-Brown, J., Harfouche, A., Casler, M. D., Dylan Jones, H., Macalpine, W. J., Murphy-Bokern, D., Smart, L. B., Adler, A., Ashman, C., Awty-Carroll, D., Bastien, C., Bopper, S., Botnari, V., Brancourt-Hulmel, M., Chen, Z., Clark, L. V., Cosentino, S., Dalton, S., Davey, C., Dolstra, O. & 39 others, Donnison, I., Flavell, R., Greef, J., Hanley, S., Hastings, A., Hertzberg, M., Hsu, T. W., Huang, L. S., Iurato, A., Jensen, E., Jin, X., Jørgensen, U., Kiesel, A., Kim, D. S., Liu, J., McCalmont, J. P., McMahon, B. G., Mos, M., Robson, P., Sacks, E. J., Sandu, A., Scalici, G., Schwarz, K., Scordia, D., Shafiei, R., Shield, I., Slavov, G., Stanton, B. J., Swaminathan, K., Taylor, G., Torres, A. F., Trindade, L. M., Tschaplinski, T., Tuskan, G. A., Yamada, T., Yeon Yu, C., Zalesny, R. S., Zong, J. & Lewandowski, I., Jan 2019, In : GCB Bioenergy. 11, 1, p. 118-151 34 p.

Research output: Contribution to journalArticle

Can chilling tolerance of C4 photosynthesis in Miscanthus be transferred to sugarcane?

Glowacka, K., Ahmed, A., Sharma, S., Abbott, T., Comstock, J. C., Long, S. P. & Sacks, E. J., Mar 1 2016, In : GCB Bioenergy. 8, 2, p. 407-418 12 p.

Research output: Contribution to journalArticle

Can miscanthus C4 photosynthesis compete with festulolium C3 photosynthesis in a temperate climate?

Jiao, X., Kørup, K., Andersen, M. N., Sacks, E. J., Zhu, X. G., Lærke, P. E. & Jørgensen, U., Jan 1 2017, In : GCB Bioenergy. 9, 1, p. 18-30 13 p.

Research output: Contribution to journalArticle

Can the exceptional chilling tolerance of C4 photosynthesis found in Miscanthus ;× giganteus be exceeded? Screening of a novel Miscanthus Japanese germplasm collection

Głowacka, K., Jørgensen, U., Kjeldsen, J. B., Kørup, K., Spitz, I., Sacks, E. J. & Long, S. P., May 1 2015, In : Annals of botany. 115, 6, p. 981-990 10 p.

Research output: Contribution to journalArticle

Characterizing a miscanthus germplasm collection for yield, yield components, and genotype × environment interactions

Kaiser, C. M., Clark, L. V., Juvik, J. A., Voigt, T. B. & Sacks, E. J., Sep 1 2015, In : Crop Science. 55, 5, p. 1978-1994 17 p.

Research output: Contribution to journalArticle

Clonal performance of perennial Oryza sativa/O. rufipogon selections and their combining ability with O. sativa cultivars for survival, stolon production and yield

Sacks, E. J., Dhanapala, M. P., Sta. Cruz, M. T. & Sallan, R., Feb 1 2007, In : Field Crops Research. 100, 2-3, p. 155-167 13 p.

Research output: Contribution to journalArticle

Cold-tolerance of Miscanthus seedlings and effects of spring and autumn frosts on mature clonally replicated cultivars

Kaiser, C. M. & Sacks, E. J., Sep 1 2015, In : Crop Science. 55, 5, p. 2401-2415 15 p.

Research output: Contribution to journalArticle

Convergent evolution of perenniality in rice and sorghum

Hu, F. Y., Tao, D. Y., Sacks, E., Fu, B. Y., Xu, P., Li, J., Yang, Y., McNally, K., Khush, G. S., Paterson, A. H. & Li, Z. K., Apr 1 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 7, p. 4050-4054 5 p.

Research output: Contribution to journalArticle

Cryogenic Storage of tomato pollen: Effect on fecundity

Sacks, E. J. & St. Clair, D. A., Jun 1 1996, In : HortScience. 31, 3, p. 447-448 2 p.

Research output: Contribution to journalArticle

Determination of hemicellulose, cellulose and lignin content using visible and near infrared spectroscopy in Miscanthus sinensis

Jin, X., Chen, X., Shi, C., Li, M., Guan, Y., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Jan 1 2017, In : Bioresource Technology. 241, p. 603-609 7 p.

Research output: Contribution to journalArticle

Determination of leaf water content by visible and near-infrared spectrometry and multivariate calibration in Miscanthus

Jin, X., Shi, C., Yu, C. Y., Yamada, T. & Sacks, E. J., May 19 2017, In : Frontiers in Plant Science. 8, 721.

Research output: Contribution to journalArticle

Developing perennial upland rice I: Field performance of Oryza sativa/O. rufipogon F1, F4, and BC1F4 progeny

Sacks, E. J., Roxas, J. P. & Maria, M. T., Jan 1 2003, In : Crop Science. 43, 1, p. 120-128 9 p.

Research output: Contribution to journalArticle

Developing perennial upland rice II: Field performance of S1 families from an intermated Oryza sativa/O. longistaminata population

Sacks, E. J., Roxas, J. P. & Maria, M. T., Jan 1 2003, In : Crop Science. 43, 1, p. 129-134 6 p.

Research output: Contribution to journalArticle

DNA markers for identifying interspecific hybrids between Miscanthus sacchariflorus and Miscanthus sinensis

Tamura, K. I., Sanada, Y., Shoji, A., Okumura, K., Uwatoko, N., Anzoua, K. G., Sacks, E. J. & Yamada, T., Sep 1 2015, In : Grassland Science. 61, 3, p. 160-166 7 p.

Research output: Contribution to journalArticle

Ecological characteristics and in situ genetic associations for yield-component traits of wild Miscanthus from eastern Russia

Clark, L. V., Dzyubenko, E., Dzyubenko, N., Bagmet, L., Sabitov, A., Chebukin, P., Johnson, D. A., Kjeldsen, J. B., Petersen, K. K., Jørgensen, U., Yoo, J. H., Heo, K., Yu, C. Y., Zhao, H., Jin, X., Peng, J., Yamada, T. & Sacks, E. J., Oct 1 2016, In : Annals of botany. 118, 5, p. 941-955 15 p.

Research output: Contribution to journalArticle

Establishment of Miscanthus sinensis with decreased lignin biosynthesis by Agrobacterium–mediated transformation using antisense COMT gene

Yoo, J. H., Seong, E. S., Ghimire, B. K., Heo, K., Jin, X., Yamada, T., Clark, L. V., Sacks, E. J. & Yu, C. Y., Jun 1 2018, In : Plant Cell, Tissue and Organ Culture. 133, 3, p. 359-369 11 p.

Research output: Contribution to journalArticle

Evaluation of genomic selection and marker-assisted selection in Miscanthus and energycane

Olatoye, M. O., Clark, L. V., Wang, J., Yang, X., Yamada, T., Sacks, E. J. & Lipka, A. E., Dec 1 2019, In : Molecular Breeding. 39, 12, 171.

Research output: Contribution to journalArticle

Open Access

Fertility in an interspecific rice population and its effect on selection for rhizome length

Sacks, E. J., Schmit, V., McNally, K. L. & Sta. Cruz, M. T., Jan 8 2006, In : Field Crops Research. 95, 1, p. 30-38 9 p.

Research output: Contribution to journalArticle

Field Performance of Saccharum × Miscanthus Intergeneric Hybrids (Miscanes) Under Cool Climatic Conditions of Northern Japan

Kar, S., Weng, T. Y., Nakashima, T., Villanueva-Morales, A., Stewart, J. R., Sacks, E. J., Terajima, Y. & Yamada, T., Mar 1 2020, In : Bioenergy Research. 13, 1, p. 132-146 15 p.

Research output: Contribution to journalArticle

Genetic diversity of Miscanthus sinensis in US naturalized populations

Zhao, Y., Basak, S., Fleener, C. E., Egnin, M., Sacks, E. J., Prakash, C. S. & He, G., May 1 2017, In : GCB Bioenergy. 9, 5, p. 965-972 8 p.

Research output: Contribution to journalArticle

Genetic mapping of biomass yield in three interconnected Miscanthus populations

Dong, H., Liu, S., Clark, L. V., Sharma, S., Gifford, J. M., Juvik, J. A., Lipka, A. E. & Sacks, E. J., Mar 2018, In : GCB Bioenergy. 10, 3, p. 165-185 21 p.

Research output: Contribution to journalArticle

Genetic variation in Miscanthus × giganteus and the importance of estimating genetic distance thresholds for differentiating clones

Głowacka, K., Clark, L. V., Adhikari, S., Peng, J., Stewart, J. R., Nishiwaki, A., Yamada, T., Jørgensen, U., Hodkinson, T. R., Gifford, J., Juvik, J. A. & Sacks, E. J., Mar 1 2015, In : GCB Bioenergy. 7, 2, p. 386-404 19 p.

Research output: Contribution to journalArticle

Genome-wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Aug 2019, In : GCB Bioenergy. 11, 8, p. 988-1007 20 p.

Research output: Contribution to journalArticle

Open Access

High-density genetic map of Miscanthus sinensis reveals inheritance of zebra stripe

Liu, S., Clark, L. V., Swaminathan, K., Gifford, J. M., Juvik, J. A. & Sacks, E. J., May 1 2016, In : GCB Bioenergy. 8, 3, p. 616-630 15 p.

Research output: Contribution to journalArticle

Identification and genomic location of a reniform nematode (Rotylenchulus reniformis) resistance locus (Ren ari ) introgressed from Gossypium aridum into upland cotton (G. hirsutum)

Romano, G. B., Sacks, E. J., Stetina, S. R., Robinson, A. F., Fang, D. D., Gutierrez, O. A. & Scheffler, J. A., Jan 1 2009, In : Theoretical and Applied Genetics. 120, 1, p. 139-150 12 p.

Research output: Contribution to journalArticle

Optimum allocation of objective color measurements for evaluating fresh strawberries

Sacks, E. J. & Shaw, D. V., Jan 1 1994, In : Journal of the American Society for Horticultural Science. 119, 2, p. 330-334 5 p.

Research output: Contribution to journalArticle

Open Access

Perennial hybrids of Oryza sativa × Oryza rufipogon. Part II. Carbon exchange and assimilate partitioning

Zhao, M., Acuña, T. L. B., Lafitte, H. R., Dimayuga, G. & Sacks, E., Mar 20 2008, In : Field Crops Research. 106, 3, p. 214-223 10 p.

Research output: Contribution to journalArticle

Perennial O. sativa × O. rufipogon interspecific hybrids: I. Photosynthetic characteristics and their inheritance

Zhao, M., Lafitte, H. R., Sacks, E., Dimayuga, G. & Acuña, T. L. B., Mar 20 2008, In : Field Crops Research. 106, 3, p. 203-213 11 p.

Research output: Contribution to journalArticle

Photosynthetic characteristics in Oryza species

Zhao, M., Ding, Z., Lafitte, R., Sacks, E., Dimayuga, G. & Holt, D., Aug 24 2010, In : Photosynthetica. 48, 2, p. 234-240 7 p.

Research output: Contribution to journalArticle

Plant morphology, genome size, and SSR markers differentiate five distinct taxonomic groups among accessions in the genus Miscanthus

Chae, W. B., Hong, S. J., Gifford, J. M., Rayburn, A. L., Sacks, E. J. & Juvik, J. A., Nov 1 2014, In : GCB Bioenergy. 6, 6, p. 646-660 15 p.

Research output: Contribution to journalArticle

polyRAD: Genotype calling with uncertainty from sequencing data in polyploids and diploids

Clark, L. V., Lipka, A. E. & Sacks, E. J., Mar 1 2019, In : G3: Genes, Genomes, Genetics. 9, 3, p. 663-673 11 p.

Research output: Contribution to journalArticle

Open Access

Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. Sinensis, and diversity centred around the Yellow Sea

Clark, L. V., Jin, X., Petersen, K. K., Anzoua, K. G., Bagmet, L., Chebukin, P., Deuter, M., Dzyubenko, E., Dzyubenko, N., Heo, K., Johnson, D. A., Jørgensen, U., Kjeldsen, J. B., Nagano, H., Peng, J., Sabitov, A., Yamada, T., Yoo, J. H., Yu, C. Y., Long, S. P. & 1 others, Sacks, E. J., Sep 13 2019, In : Annals of botany. 124, 4, p. 731-748 18 p.

Research output: Contribution to journalArticle

Open Access

Resistance in Lycopersicon esculentum intraspecific crosses to race T1 strains of Xanthomonas campestris pv. vesicatoria causing bacterial spot of tomato

Yang, W., Sacks, E. J., Lewis Ivey, M. L., Miller, S. A. & Francis, D. M., May 1 2005, In : Phytopathology. 95, 5, p. 519-527 9 p.

Research output: Contribution to journalArticle

Saccharum × Miscanthus intergeneric hybrids (miscanes) exhibit greater chilling tolerance of C4 photosynthesis and postchilling recovery than sugarcane (Saccharum spp. hybrids)

Kar, S., Zhang, N., Nakashima, T., Villanueva-Morales, A., Stewart, J. R., Sacks, E. J., Terajima, Y. & Yamada, T., Nov 1 2019, In : GCB Bioenergy. 11, 11, p. 1318-1333 16 p.

Research output: Contribution to journalArticle

Open Access

Siberian Miscanthus sacchariflorus accessions surpass the exceptional chilling tolerance of the most widely cultivated clone of Miscanthus x giganteus

Pignon, C. P., Spitz, I., Sacks, E. J., Jørgensen, U., Kørup, K. & Long, S. P., Jul 2019, In : GCB Bioenergy. 11, 7, p. 883-894 12 p.

Research output: Contribution to journalArticle

Open Access

SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum

Kim, C., Zhang, D., Auckland, S. A., Rainville, L. K., Jakob, K., Kronmiller, B., Sacks, E. J., Deuter, M. & Paterson, A. H., Jan 24 2012, In : Theoretical and Applied Genetics. 124, 7, p. 1325-1338 14 p.

Research output: Contribution to journalArticle

TagDigger: User-friendly extraction of read counts from GBS and RAD-seq data

Clark, L. V. & Sacks, E. J., Jul 11 2016, In : Source Code for Biology and Medicine. 11, 1, 11.

Research output: Contribution to journalArticle

The performance of early-generation perennial winter cereals at 21 sites across four continents

Hayes, R. C., Wang, S., Newell, M. T., Turner, K., Larsen, J., Gazza, L., Anderson, J. A., Bell, L. W., Cattani, D. J., Frels, K., Galassi, E., Morgounov, A. I., Revell, C. K., Thapa, D. B., Sacks, E. J., Sameri, M., Wade, L. J., Westerbergh, A., Shamanin, V., Amanov, A. & 1 others, Li, G. D., Apr 9 2018, In : Sustainability (Switzerland). 10, 4, 1124.

Research output: Contribution to journalArticle

Transient overexpression of the Miscanthus sinensis glucose-6-phosphate isomerase gene (MsGPI) in Nicotiana benthamiana enhances expression of genes related to antioxidant metabolism

Seong, E. S., Yoo, J. H., Lee, J. G., Kim, H. Y., Hwang, I. S., Heo, K., Lim, J. D., Lee, D. K., Sacks, E. J. & Yu, C. Y., Sep 1 2013, In : Plant OMICS. 6, 6, p. 408-414 7 p.

Research output: Contribution to journalArticle

Variation among 41 genotypes of tomato (Lycopersicon esculentum Mill.) for Crossability to L. peruvianum (L.) Mill.

Sacks, E. J., Gerhardt, L. M., Graham, E. B., Jacobs, J., Thorrup, T. A. & St. Clair, D. A., Oct 1997, In : Annals of botany. 80, 4, p. 469-477 9 p.

Research output: Contribution to journalArticle