Erik J Sacks

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Research Output

Winter hardiness of Miscanthus (III): Genome-wide association and genomic prediction for overwintering ability in Miscanthus sinensis

Dong, H., Clark, L. V., Lipka, A. E., Brummer, J. E., Głowacka, K., Hall, M. C., Heo, K., Jin, X., Peng, J., Yamada, T., Ghimire, B. K., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Aug 2019, In : GCB Bioenergy. 11, 8, p. 930-955 26 p.

Research output: Contribution to journalArticle

Open Access

Winter hardiness of Miscanthus (II): Genetic mapping for overwintering ability and adaptation traits in three interconnected Miscanthus populations

Dong, H., Liu, S., Clark, L. V., Sharma, S., Gifford, J. M., Juvik, J. A., Lipka, A. E. & Sacks, E. J., May 2019, In : GCB Bioenergy. 11, 5, p. 706-726 21 p.

Research output: Contribution to journalArticle

Winter hardiness of Miscanthus (I): Overwintering ability and yield of new Miscanthus ×giganteus genotypes in Illinois and Arkansas

Dong, H., Green, S. V., Nishiwaki, A., Yamada, T., Stewart, J. R., Deuter, M. & Sacks, E. J., May 2019, In : GCB Bioenergy. 11, 5, p. 691-705 15 p.

Research output: Contribution to journalArticle

Variation in chilling tolerance for photosynthesis and leaf extension growth among genotypes related to the C4 grass Miscanthus ×giganteus

Głowacka, K., Adhikari, S., Peng, J., Gifford, J., Juvik, J. A., Long, S. P. & Sacks, E. J., Oct 1 2014, In : Journal of experimental botany. 65, 18, p. 5267-5278 12 p.

Research output: Contribution to journalArticle

Variation among seven genotypes of Lycopersicon esculentum and 36 accessions of L. hirsutum for interspecific crossability

Sacks, E. J. & St. Clair, D. A., Jan 1 1998, In : Euphytica. 101, 2, p. 185-191 7 p.

Research output: Contribution to journalArticle

Variation among 41 genotypes of tomato (Lycopersicon esculentum Mill.) for Crossability to L. peruvianum (L.) Mill.

Sacks, E. J., Gerhardt, L. M., Graham, E. B., Jacobs, J., Thorrup, T. A. & St. Clair, D. A., Oct 1997, In : Annals of botany. 80, 4, p. 469-477 9 p.

Research output: Contribution to journalArticle

Transient overexpression of the Miscanthus sinensis glucose-6-phosphate isomerase gene (MsGPI) in Nicotiana benthamiana enhances expression of genes related to antioxidant metabolism

Seong, E. S., Yoo, J. H., Lee, J. G., Kim, H. Y., Hwang, I. S., Heo, K., Lim, J. D., Lee, D. K., Sacks, E. J. & Yu, C. Y., Sep 1 2013, In : Plant OMICS. 6, 6, p. 408-414 7 p.

Research output: Contribution to journalArticle

The performance of early-generation perennial winter cereals at 21 sites across four continents

Hayes, R. C., Wang, S., Newell, M. T., Turner, K., Larsen, J., Gazza, L., Anderson, J. A., Bell, L. W., Cattani, D. J., Frels, K., Galassi, E., Morgounov, A. I., Revell, C. K., Thapa, D. B., Sacks, E. J., Sameri, M., Wade, L. J., Westerbergh, A., Shamanin, V., Amanov, A. & 1 others, Li, G. D., Apr 9 2018, In : Sustainability (Switzerland). 10, 4, 1124.

Research output: Contribution to journalArticle

The gene pool of Miscanthus species and its improvement

Sacks, E. J., Juvik, J. A., Lin, Q., Ryan Stewart, J. & Yamada, T., Jan 1 2013, Genomics of the Saccharinae. Springer New York, p. 73-101 29 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

TagDigger: User-friendly extraction of read counts from GBS and RAD-seq data

Clark, L. V. & Sacks, E. J., Jul 11 2016, In : Source Code for Biology and Medicine. 11, 1, 11.

Research output: Contribution to journalArticle

SSR-based genetic maps of Miscanthus sinensis and M. sacchariflorus, and their comparison to sorghum

Kim, C., Zhang, D., Auckland, S. A., Rainville, L. K., Jakob, K., Kronmiller, B., Sacks, E. J., Deuter, M. & Paterson, A. H., Jan 24 2012, In : Theoretical and Applied Genetics. 124, 7, p. 1325-1338 14 p.

Research output: Contribution to journalArticle

Siberian Miscanthus sacchariflorus accessions surpass the exceptional chilling tolerance of the most widely cultivated clone of Miscanthus x giganteus

Pignon, C. P., Spitz, I., Sacks, E. J., Jørgensen, U., Kørup, K. & Long, S. P., Jul 2019, In : GCB Bioenergy. 11, 7, p. 883-894 12 p.

Research output: Contribution to journalArticle

Open Access

Saccharum × Miscanthus intergeneric hybrids (miscanes) exhibit greater chilling tolerance of C4 photosynthesis and postchilling recovery than sugarcane (Saccharum spp. hybrids)

Kar, S., Zhang, N., Nakashima, T., Villanueva-Morales, A., Stewart, J. R., Sacks, E. J., Terajima, Y. & Yamada, T., Nov 1 2019, In : GCB Bioenergy. 11, 11, p. 1318-1333 16 p.

Research output: Contribution to journalArticle

Open Access

Response

Glover, J. D., Reganold, J. P., Bell, L. W., Borevitz, J., Brummer, E. C., Buckler, E. S., Cox, C. M., Cox, T. S., Crews, T. E., Culman, S. W., Dehaan, L. R., Eriksson, D., Gill, B. S., Holland, J., Hu, F., Hulke, B. S., Ibrahim, A. M. H., Jackson, W., Jones, S. S., Murray, S. C. & 9 others, Paterson, A. H., Ploschuk, E., Sacks, E. J., Snapp, S., Tao, D., Van Tassel, D. L., Wade, L. J., Wyse, D. L. & Xu, Y., Oct 1 2010, In : Science. 330, 6000, p. 33-34 2 p.

Research output: Contribution to journalLetter

Resistance in Lycopersicon esculentum intraspecific crosses to race T1 strains of Xanthomonas campestris pv. vesicatoria causing bacterial spot of tomato

Yang, W., Sacks, E. J., Lewis Ivey, M. L., Miller, S. A. & Francis, D. M., May 1 2005, In : Phytopathology. 95, 5, p. 519-527 9 p.

Research output: Contribution to journalArticle

Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. Sinensis, and diversity centred around the Yellow Sea

Clark, L. V., Jin, X., Petersen, K. K., Anzoua, K. G., Bagmet, L., Chebukin, P., Deuter, M., Dzyubenko, E., Dzyubenko, N., Heo, K., Johnson, D. A., Jørgensen, U., Kjeldsen, J. B., Nagano, H., Peng, J., Sabitov, A., Yamada, T., Yoo, J. H., Yu, C. Y., Long, S. P. & 1 others, Sacks, E. J., Sep 13 2019, In : Annals of botany. 124, 4, p. 731-748 18 p.

Research output: Contribution to journalArticle

Open Access

polyRAD: Genotype calling with uncertainty from sequencing data in polyploids and diploids

Clark, L. V., Lipka, A. E. & Sacks, E. J., Mar 1 2019, In : G3: Genes, Genomes, Genetics. 9, 3, p. 663-673 11 p.

Research output: Contribution to journalArticle

Open Access

Plant morphology, genome size, and SSR markers differentiate five distinct taxonomic groups among accessions in the genus Miscanthus

Chae, W. B., Hong, S. J., Gifford, J. M., Rayburn, A. L., Sacks, E. J. & Juvik, J. A., Nov 1 2014, In : GCB Bioenergy. 6, 6, p. 646-660 15 p.

Research output: Contribution to journalArticle

Photosynthetic characteristics in Oryza species

Zhao, M., Ding, Z., Lafitte, R., Sacks, E., Dimayuga, G. & Holt, D., Aug 24 2010, In : Photosynthetica. 48, 2, p. 234-240 7 p.

Research output: Contribution to journalArticle

Perennial O. sativa × O. rufipogon interspecific hybrids: I. Photosynthetic characteristics and their inheritance

Zhao, M., Lafitte, H. R., Sacks, E., Dimayuga, G. & Acuña, T. L. B., Mar 20 2008, In : Field Crops Research. 106, 3, p. 203-213 11 p.

Research output: Contribution to journalArticle

Perennial hybrids of Oryza sativa × Oryza rufipogon. Part II. Carbon exchange and assimilate partitioning

Zhao, M., Acuña, T. L. B., Lafitte, H. R., Dimayuga, G. & Sacks, E., Mar 20 2008, In : Field Crops Research. 106, 3, p. 214-223 10 p.

Research output: Contribution to journalArticle

Optimum allocation of objective color measurements for evaluating fresh strawberries

Sacks, E. J. & Shaw, D. V., Jan 1 1994, In : Journal of the American Society for Horticultural Science. 119, 2, p. 330-334 5 p.

Research output: Contribution to journalArticle

Open Access

Increased food and ecosystem security via perennial grains

Glover, J. D., Reganold, J. P., Bell, L. W., Borevitz, J., Brummer, E. C., Buckler, E. S., Cox, C. M., Cox, T. S., Crews, T. E., Culman, S. W., DeHaan, L. R., Eriksson, D., Gill, B. S., Holland, J., Hu, F., Hulke, B. S., Ibrahim, A. M. H., Jackson, W., Jones, S. S., Murray, S. C. & 9 others, Peterson, A. H., Ploschuk, E., Sacks, E. J., Snapp, S., Tao, D., Van Tassel, D. L., Wade, L. J., Wyse, D. L. & Xu, Y., Jun 25 2010, In : Science. 328, 5986, p. 1638-1639 2 p.

Research output: Contribution to journalShort survey

Identification and genomic location of a reniform nematode (Rotylenchulus reniformis) resistance locus (Ren ari ) introgressed from Gossypium aridum into upland cotton (G. hirsutum)

Romano, G. B., Sacks, E. J., Stetina, S. R., Robinson, A. F., Fang, D. D., Gutierrez, O. A. & Scheffler, J. A., Jan 1 2009, In : Theoretical and Applied Genetics. 120, 1, p. 139-150 12 p.

Research output: Contribution to journalArticle

High-density genetic map of Miscanthus sinensis reveals inheritance of zebra stripe

Liu, S., Clark, L. V., Swaminathan, K., Gifford, J. M., Juvik, J. A. & Sacks, E. J., May 1 2016, In : GCB Bioenergy. 8, 3, p. 616-630 15 p.

Research output: Contribution to journalArticle

Genome-wide association and genomic prediction for biomass yield in a genetically diverse Miscanthus sinensis germplasm panel phenotyped at five locations in Asia and North America

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Aug 2019, In : GCB Bioenergy. 11, 8, p. 988-1007 20 p.

Research output: Contribution to journalArticle

Open Access

Genetic variation in Miscanthus × giganteus and the importance of estimating genetic distance thresholds for differentiating clones

Głowacka, K., Clark, L. V., Adhikari, S., Peng, J., Stewart, J. R., Nishiwaki, A., Yamada, T., Jørgensen, U., Hodkinson, T. R., Gifford, J., Juvik, J. A. & Sacks, E. J., Mar 1 2015, In : GCB Bioenergy. 7, 2, p. 386-404 19 p.

Research output: Contribution to journalArticle

Genetic structure of Miscanthus sinensis and Miscanthus sacchariflorus in Japan indicates a gradient of bidirectional but asymmetric introgression

Clark, L. V., Ryan Stewart, J., Nishiwaki, A., Toma, Y., Kjeldsen, J. B., Jørgensen, U., Zhao, H., Peng, J., Yoo, J. H., Heo, K., Yu, C. Y., Yamada, T. & Sacks, E. J., Jan 1 2015, In : Journal of experimental botany. 66, 14, p. 4213-4225 13 p.

Research output: Contribution to journalReview article

Genetic mapping of biomass yield in three interconnected Miscanthus populations

Dong, H., Liu, S., Clark, L. V., Sharma, S., Gifford, J. M., Juvik, J. A., Lipka, A. E. & Sacks, E. J., Mar 2018, In : GCB Bioenergy. 10, 3, p. 165-185 21 p.

Research output: Contribution to journalArticle

Genetic diversity of Miscanthus sinensis in US naturalized populations

Zhao, Y., Basak, S., Fleener, C. E., Egnin, M., Sacks, E. J., Prakash, C. S. & He, G., May 1 2017, In : GCB Bioenergy. 9, 5, p. 965-972 8 p.

Research output: Contribution to journalArticle

Field Performance of Saccharum × Miscanthus Intergeneric Hybrids (Miscanes) Under Cool Climatic Conditions of Northern Japan

Kar, S., Weng, T. Y., Nakashima, T., Villanueva-Morales, A., Stewart, J. R., Sacks, E. J., Terajima, Y. & Yamada, T., Mar 1 2020, In : Bioenergy Research. 13, 1, p. 132-146 15 p.

Research output: Contribution to journalArticle

Fertility in an interspecific rice population and its effect on selection for rhizome length

Sacks, E. J., Schmit, V., McNally, K. L. & Sta. Cruz, M. T., Jan 8 2006, In : Field Crops Research. 95, 1, p. 30-38 9 p.

Research output: Contribution to journalArticle

Evaluation of genomic selection and marker-assisted selection in Miscanthus and energycane

Olatoye, M. O., Clark, L. V., Wang, J., Yang, X., Yamada, T., Sacks, E. J. & Lipka, A. E., Dec 1 2019, In : Molecular Breeding. 39, 12, 171.

Research output: Contribution to journalArticle

Open Access

Establishment of Miscanthus sinensis with decreased lignin biosynthesis by Agrobacterium–mediated transformation using antisense COMT gene

Yoo, J. H., Seong, E. S., Ghimire, B. K., Heo, K., Jin, X., Yamada, T., Clark, L. V., Sacks, E. J. & Yu, C. Y., Jun 1 2018, In : Plant Cell, Tissue and Organ Culture. 133, 3, p. 359-369 11 p.

Research output: Contribution to journalArticle

Ecological characteristics and in situ genetic associations for yield-component traits of wild Miscanthus from eastern Russia

Clark, L. V., Dzyubenko, E., Dzyubenko, N., Bagmet, L., Sabitov, A., Chebukin, P., Johnson, D. A., Kjeldsen, J. B., Petersen, K. K., Jørgensen, U., Yoo, J. H., Heo, K., Yu, C. Y., Zhao, H., Jin, X., Peng, J., Yamada, T. & Sacks, E. J., Oct 1 2016, In : Annals of botany. 118, 5, p. 941-955 15 p.

Research output: Contribution to journalArticle

DNA markers for identifying interspecific hybrids between Miscanthus sacchariflorus and Miscanthus sinensis

Tamura, K. I., Sanada, Y., Shoji, A., Okumura, K., Uwatoko, N., Anzoua, K. G., Sacks, E. J. & Yamada, T., Sep 1 2015, In : Grassland Science. 61, 3, p. 160-166 7 p.

Research output: Contribution to journalArticle

Developing perennial upland rice II: Field performance of S1 families from an intermated Oryza sativa/O. longistaminata population

Sacks, E. J., Roxas, J. P. & Maria, M. T., Jan 1 2003, In : Crop Science. 43, 1, p. 129-134 6 p.

Research output: Contribution to journalArticle

Developing perennial upland rice I: Field performance of Oryza sativa/O. rufipogon F1, F4, and BC1F4 progeny

Sacks, E. J., Roxas, J. P. & Maria, M. T., Jan 1 2003, In : Crop Science. 43, 1, p. 120-128 9 p.

Research output: Contribution to journalArticle

Determination of leaf water content by visible and near-infrared spectrometry and multivariate calibration in Miscanthus

Jin, X., Shi, C., Yu, C. Y., Yamada, T. & Sacks, E. J., May 19 2017, In : Frontiers in Plant Science. 8, 721.

Research output: Contribution to journalArticle

Determination of hemicellulose, cellulose and lignin content using visible and near infrared spectroscopy in Miscanthus sinensis

Jin, X., Chen, X., Shi, C., Li, M., Guan, Y., Yu, C. Y., Yamada, T., Sacks, E. J. & Peng, J., Jan 1 2017, In : Bioresource Technology. 241, p. 603-609 7 p.

Research output: Contribution to journalArticle

Cryogenic Storage of tomato pollen: Effect on fecundity

Sacks, E. J. & St. Clair, D. A., Jun 1 1996, In : HortScience. 31, 3, p. 447-448 2 p.

Research output: Contribution to journalArticle

Convergent evolution of perenniality in rice and sorghum

Hu, F. Y., Tao, D. Y., Sacks, E., Fu, B. Y., Xu, P., Li, J., Yang, Y., McNally, K., Khush, G. S., Paterson, A. H. & Li, Z. K., Apr 1 2003, In : Proceedings of the National Academy of Sciences of the United States of America. 100, 7, p. 4050-4054 5 p.

Research output: Contribution to journalArticle

Contrasting allelic distribution of CO/Hd1 homologues in Miscanthus sinensis from the East Asian mainland and the Japanese archipelago

Nagano, H., Clark, L. V., Zhao, H., Peng, J., Yoo, J. H., Heo, K., Yu, C. Y., Anzoua, K. G., Matsuo, T., Sacks, E. J. & Yamada, T., Jan 1 2015, In : Journal of experimental botany. 66, 14, p. 4227-4237 11 p.

Research output: Contribution to journalReview article

Cold-tolerance of Miscanthus seedlings and effects of spring and autumn frosts on mature clonally replicated cultivars

Kaiser, C. M. & Sacks, E. J., Sep 1 2015, In : Crop Science. 55, 5, p. 2401-2415 15 p.

Research output: Contribution to journalArticle

Clonal performance of perennial Oryza sativa/O. rufipogon selections and their combining ability with O. sativa cultivars for survival, stolon production and yield

Sacks, E. J., Dhanapala, M. P., Sta. Cruz, M. T. & Sallan, R., Feb 1 2007, In : Field Crops Research. 100, 2-3, p. 155-167 13 p.

Research output: Contribution to journalArticle

Characterizing a miscanthus germplasm collection for yield, yield components, and genotype × environment interactions

Kaiser, C. M., Clark, L. V., Juvik, J. A., Voigt, T. B. & Sacks, E. J., Sep 1 2015, In : Crop Science. 55, 5, p. 1978-1994 17 p.

Research output: Contribution to journalArticle