Research output per year
Research output per year
- 24 results
Search results
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2023
Estimating Heterogeneous Treatment Effect on Multivariate Responses Using Random Forests
Guo, B., Holscher, H. D., Auvil, L. S., Welge, M. E., Bushell, C. B., Novotny, J. A., Baer, D. J., Burd, N. A., Khan, N. A. & Zhu, R., Dec 2023, In: Statistics in Biosciences. 15, 3, p. 545-561 17 p.Research output: Contribution to journal › Article › peer-review
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In vivo label-free optical signatures of chemotherapy response in human pancreatic ductal adenocarcinoma patient-derived xenografts
Park, J., Sorrells, J. E., Chaney, E. J., Abdelrahman, A. M., Yonkus, J. A., Leiting, J. L., Nelson, H., Harrington, J. J., Aksamitiene, E., Marjanovic, M., Groves, P. D., Bushell, C., Truty, M. J. & Boppart, S. A., Dec 2023, In: Communications biology. 6, 1, 980.Research output: Contribution to journal › Article › peer-review
Open Access -
2021
Acyloxyacyl hydrolase is a host determinant of gut microbiome-mediated pelvic pain
Rahman-Enyart, A., Yang, W., Yaggie, R. E., White, B. A., Welge, M., Auvil, L., Berry, M., Bushell, C., Rosen, J. M., Rudick, C. N., Schaeffer, A. J. & Klumpp, D. J., Aug 25 2021, In: American Journal of Physiology - Regulatory Integrative and Comparative Physiology. 321, 3, p. R396-R412Research output: Contribution to journal › Article › peer-review
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Fecal Bacteria as Biomarkers for Predicting Food Intake in Healthy Adults
Shinn, L. M., Li, Y., Mansharamani, A., Auvil, L. S., Welge, M. E., Bushell, C. B., Khan, N. A., Charron, C. S., Novotny, J. A., Baer, D. J., Zhu, R. & Holscher, H. D., Feb 1 2021, In: The Journal of nutrition. 151, 2, p. 423-433 11 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Lung epithelial and endothelial damage, loss of tissue repair, inhibition of fibrinolysis, and cellular senescence in fatal COVID-19
D'Agnillo, F., Walters, K. A., Xiao, Y., Sheng, Z. M., Scherler, K., Park, J., Gygli, S., Rosas, L. A., Sadtler, K., Kalish, H., Blatti, C. A., Zhu, R., Gatzke, L., Bushell, C., Memoli, M. J., O'Day, S. J., Fischer, T. D., Hammond, T. C., Lee, R. C. & Cash, J. C. & 8 others, , Nov 17 2021, In: Science Translational Medicine. 13, 620, abj7790.Research output: Contribution to journal › Article › peer-review
Open Access -
Risk assessment of latent tuberculosis infection through a multiplexed cytokine biosensor assay and machine learning feature selection
Robison, H. M., Chapman, C. A., Zhou, H., Erskine, C. L., Theel, E., Peikert, T., Lindestam Arlehamn, C. S., Sette, A., Bushell, C., Welge, M., Zhu, R., Bailey, R. C. & Escalante, P., Dec 2021, In: Scientific reports. 11, 1, 20544.Research output: Contribution to journal › Article › peer-review
Open Access -
2020
Assessment of peritoneal microbial features and tumor marker levels as potential diagnostic tools for ovarian cancer
Miao, R., Badger, T. C., Groesch, K., Diaz-Sylvester, P. L., Wilson, T., Ghareeb, A., Martin, J. A., Cregger, M., Welge, M., Bushell, C., Auvil, L., Zhu, R., Brard, L. & Braundmeier-Fleming, A., Jan 1 2020, In: PloS one. 15, 1, e0227707.Research output: Contribution to journal › Article › peer-review
Open Access -
Characterizing treatment response of pancreatic tumor patient-derived xenografts in mice by Simultaneous Label-Free Autofluorescence Multi-Harmonic (SLAM) microscopy
Park, J., Chaney, E., You, S., Abdelrahman, A. M., Leiting, J. L., Yonkus, J. A., Groves, P. D., Harrington, J. J., Spillman, D. R., Lynch, I. T., Marjanovic, M., Tu, H., Bushell, C. B., Nelson, H., Truty, M. J. & Boppart, S. A., 2020, Clinical and Translational Biophotonics, Translational 2020. Optica Publishing Group (formerly OSA), (Optics InfoBase Conference Papers; vol. Part F178-Translational-2020).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Convergence of artificial intelligence and high performance computing on NSF-supported cyberinfrastructure
Huerta, E. A., Khan, A., Davis, E., Bushell, C., Gropp, W. D., Katz, D. S., Kindratenko, V., Koric, S., Kramer, W. T. C., McGinty, B., McHenry, K. & Saxton, A., Dec 1 2020, In: Journal of Big Data. 7, 1, 88.Research output: Contribution to journal › Article › peer-review
Open Access -
Identification of early liver toxicity gene biomarkers using comparative supervised machine learning
Smith, B. P., Auvil, L. S., Welge, M. E., Bushell, C. B., Bhargava, R., Elango, N., Johnson, K. & Madak-Erdogan, Z., Dec 1 2020, In: Scientific reports. 10, 1, 19128.Research output: Contribution to journal › Article › peer-review
Open Access -
Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform
Blatti, C., Emad, A., Berry, M. J., Gatzke, L., Epstein, M., Lanier, D., Rizal, P., Ge, J., Liao, X., Sobh, O., Lambert, M., Post, C. S., Xiao, J., Groves, P., Epstein, A. T., Chen, X., Srinivasan, S., Lehnert, E., Kalari, K. R. & Wang, L. & 8 others, , 2020, In: PLoS biology. 18, 1, e3000583.Research output: Contribution to journal › Article › peer-review
Open Access -
Multiplexed cytokine detection for immunodiagnostics using silicon photonic microring resonator arrays
Robison, H. M., Escalante, P., Valera, E., Erskine, C. L., Auvil, L., Sasieta, H. C., Bushell, C., Welge, M. E. & Bailey, R. C., 2020, 21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017. Chemical and Biological Microsystems Society, p. 3-4 2 p. (21st International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2017).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2019
Differential effects of influenza virus NA, HA head, and HA stalk antibodies on peripheral blood leukocyte gene expression during human infection
Walters, K. A., Zhu, R., Welge, M. E., Scherler, K., Park, J. K., Rahil, Z., Wang, H., Auvil, L., Bushell, C., Lee, M. Y., Baxter, D., Bristol, T., Rosas, L. A., Cervantes-Medina, A., Czajkowski, L., Han, A., Memoli, M. J., Taubenberger, J. K. & Kash, J. C., May 1 2019, In: mBio. 10, 3, e00760-19.Research output: Contribution to journal › Article › peer-review
Open Access -
Precision immunoprofiling to reveal diagnostic signatures for latent tuberculosis infection and reactivation risk stratification
Robison, H. M., Escalante, P., Valera, E., Erskine, C. L., Auvil, L., Sasieta, H. C., Bushell, C., Welge, M. E. & Bailey, R. C., Jan 1 2019, In: Integrative biology : quantitative biosciences from nano to macro. 11, 1, p. 16-25 10 p.Research output: Contribution to journal › Article › peer-review
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2018
ClusterEnG: An interactive educational web resource for clustering and visualizing high-dimensional data
Manjunath, M., Zhang, Y., Kim, Y., Yeo, S. H., Sobh, O., Russell, N., Followell, C., Bushell, C., Ravaioli, U. & Song, J. S., 2018, In: PeerJ Computer Science. 2018, 5, e155.Research output: Contribution to journal › Article › peer-review
Open Access -
Long-Term Administration of Conjugated Estrogen and Bazedoxifene Decreased Murine Fecal β-Glucuronidase Activity Without Impacting Overall Microbiome Community
Chen, K. L. A., Liu, X., Zhao, Y. C., Hieronymi, K., Rossi, G., Auvil, L. S., Welge, M., Bushell, C., Smith, R. L., Carlson, K. E., Kim, S. H., Katzenellenbogen, J. A., Miller, M. J. & Madak-Erdogan, Z., Dec 1 2018, In: Scientific reports. 8, 1, 8166.Research output: Contribution to journal › Article › peer-review
Open Access -
The use of random forests modelling to detect yeast-mannan sensitive bacterial changes in the broiler cecum
Corrigan, A., Russell, N., Welge, M., Auvil, L., Bushell, C., White, B. A. & Murphy, R. A., Dec 1 2018, In: Scientific reports. 8, 1, 13270.Research output: Contribution to journal › Article › peer-review
Open Access -
2016
Stool-based biomarkers of interstitial cystitis/bladder pain syndrome
Braundmeier-Fleming, A., Russell, N. T., Yang, W., Nas, M. Y., Yaggie, R. E., Berry, M., Bachrach, L., Flury, S. C., Marko, D. S., Bushell, C. B., Welge, M. E., White, B. A., Schaeffer, A. J. & Klumpp, D. J., May 18 2016, In: Scientific reports. 6, 26083.Research output: Contribution to journal › Article › peer-review
Open Access -
2015
PD20-09 ALTERED MICROBIOME IN CHRONIC PELVIC PAIN PATIENTS
Klumpp, D., Braudmeier-fleming, A., Yaggie, R., Bachrack, L., Flury, S., Marko, D., Berry, M., Welge, M., Bushell, C., White, B. & Schaeffer, A., Apr 1 2015, In: Journal of Urology. 193, 4SResearch output: Contribution to journal › Article › peer-review
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2004
Scientific visualization
Sherman, W. R., Craig, A. B., Pauline Baker, M. & Bushell, C., Jan 1 2004, Computer Science Handbook, Second Edition. CRC Press, p. 27-1-27-33Research output: Chapter in Book/Report/Conference proceeding › Chapter
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1995
After the Storm: Considerations for Information Visualization
Baker, M. P. & Bushell, C., May 1995, In: IEEE Computer Graphics and Applications. 15, 3, p. 12-15 4 p.Research output: Contribution to journal › Article › peer-review
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1994
Information visualization: The next frontier
Gershon, N. D., Bushell, C., Mackinlay, J. D., Ruh, W. A., Spoerri, A. & Tesler, J., Jul 24 1994, Proceedings of the 21st Annual Conference on Computer Graphics and Interactive Techniques, SIGGRAPH 1994. Association for Computing Machinery, p. 485-486 2 p. (Proceedings of the 21st Annual Conference on Computer Graphics and Interactive Techniques, SIGGRAPH 1994).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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1992
Design techniques for scientific visualization
Bushell, C., 1992, CHI 1992: Striking a Balance - ACM Conference on Human Factors in Computing Systems, Posters and Short Talks. Association for Computing Machinery, p. 67 1 p. (Conference on Human Factors in Computing Systems - Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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1990
A study of the evolution of a numerically modeled severe storm
Wilhelmson, R. B., Jewett, B. F., Shaw, C., Wicker, L. J., Arrott, M., Bushell, C. B., Bajuk, M., Thingvold, J. & Yost, J. B., Jun 1 1990, In: International Journal of High Performance Computing Applications. 4, 2, p. 20-36 17 p.Research output: Contribution to journal › Article › peer-review