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Research Output

2020

Cytogenetic characterization of the Antarctic silverfish Pleuragramma antarctica (Boulenger 1902) through analysis of mitotic chromosomes from early larvae

Ghigliotti, L., Cheng, C. H. C., Ozouf-Costaz, C., Guidi-Rontani, C., Vacchi, M., Federici, S. & Pisano, E., Aug 2020, In : Marine Genomics. 52, 100737.

Research output: Contribution to journalArticle

Molecular origins and mechanisms of fish antifreeze evolution

Cheng, C. H. C. & Zhuang, X., Jan 1 2020, Antifreeze Proteins Volume 1: Environment, Systematics and Evolution. Springer International Publishing, p. 275-313 39 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2019

A tale of two genes: Divergent evolutionary fate of haptoglobin and hemopexin in hemoglobinless Antarctic icefishes

Bilyk, K. T., Zhuang, X., Murphy, K. R. & Christina Cheng, C. H., 2019, In : Journal of Experimental Biology. 222, 6, jeb188573.

Research output: Contribution to journalArticle

Open Access
Open Access

The genomic basis for colonizing the freezing Southern Ocean revealed by Antarctic toothfish and Patagonian robalo genomes

Chen, L., Lu, Y., Li, W., Ren, Y., Yu, M., Jiang, S., Fu, Y., Wang, J., Peng, S., Bilyk, K. T., Murphy, K. R., Zhuang, X., Hune, M., Zhai, W., Wang, W., Xu, Q. & Cheng, C. H. C., Apr 1 2019, In : GigaScience. 8, 4, giz016.

Research output: Contribution to journalArticle

Open Access
2018

Controlling Liquid–Liquid Phase Separation of Cold-Adapted Crystallin Proteins from the Antarctic Toothfish

Bierma, J. C., Roskamp, K. W., Ledray, A. P., Kiss, A. J., Cheng, C. H. C. & Martin, R. W., Dec 7 2018, In : Journal of Molecular Biology. 430, 24, p. 5151-5168 18 p.

Research output: Contribution to journalArticle

Metagenomic sequencing of environmental DNA reveals marine faunal assemblages from the West Antarctic Peninsula

Cowart, D. A., Murphy, K. R. & Cheng, C. H. C., Feb 2018, In : Marine Genomics. 37, p. 148-160 13 p.

Research output: Contribution to journalArticle

Reconstruction of the repetitive antifreeze glycoprotein genomic loci in the cold-water gadids Boreogadus saida and Microgadus tomcod

Zhuang, X., Murphy, K. R., Ghigliotti, L., Pisano, E. & Cheng, C. H. C., Jun 2018, In : Marine Genomics. 39, p. 73-84 12 p.

Research output: Contribution to journalArticle

2017

Antarctic fish versus human cytoglobins – The same but yet so different

Cuypers, B., Vermeylen, S., Hammerschmid, D., Trashin, S., Rahemi, V., Konijnenberg, A., De Schutter, A., Cheng, C. H. C., Giordano, D., Verde, C., De Wael, K., Sobott, F., Dewilde, S. & Van Doorslaer, S., Aug 1 2017, In : Journal of Inorganic Biochemistry. 173, p. 66-78 13 p.

Research output: Contribution to journalArticle

Diversity and biogeography of larval and juvenile notothenioid fishes in McMurdo Sound, Antarctica

Murphy, K. R., Kalmanek, E. A. & Cheng, C. H. C., Jan 1 2017, In : Polar Biology. 40, 1, p. 161-176 16 p.

Research output: Contribution to journalArticle

2016

Sex determination in Antarctic notothenioid fish: chromosomal clues and evolutionary hypotheses

Ghigliotti, L., Cheng, C. H. C. & Pisano, E., Jan 1 2016, In : Polar Biology. 39, 1, p. 11-22 12 p.

Research output: Contribution to journalArticle

2015

Cytogenetic diversity of notothenioid fish from the Ross sea: historical overview and updates

Ghigliotti, L., Cheng, C. C. H., Ozouf-Costaz, C., Vacchi, M. & Pisano, E., Nov 1 2015, In : Hydrobiologia. 761, 1, p. 373-396 24 p.

Research output: Contribution to journalArticle

Multiple independent reduction or loss of antifreeze trait in low Antarctic and sub-Antarctic notothenioid fishes

Miya, T., Gon, O., Mwale, M. & Christina Cheng, C. H., Sep 16 2015, In : Antarctic Science. 28, 1, p. 17-28 12 p.

Research output: Contribution to journalArticle

2014
2013

In situ gene mapping of two genes supports independent evolution of sex chromosomes in cold-adapted antarctic fish

Ghigliotti, L., Cheng, C. H. C., Bonillo, C., Coutanceau, J. P. & Pisano, E., 2013, In : BioMed Research International. 2013, 243938.

Research output: Contribution to journalArticle

The effect of habitat temperature on serum antifreeze glycoprotein (AFGP) activity in Notothenia rossii (Pisces: Nototheniidae) in the Southern Ocean

Miya, T., Gon, O., Mwale, M. & Christina Cheng, C. H., Jan 1 2013, In : Polar Biology. 37, 3, p. 367-373 7 p.

Research output: Contribution to journalArticle

2012

Biophysical Characterisation of Neuroglobin of the Icefish, a Natural Knockout for Hemoglobin and Myoglobin. Comparison with Human Neuroglobin

Giordano, D., Boron, I., Abbruzzetti, S., van Leuven, W., Nicoletti, F. P., Forti, F., Bruno, S., Cheng, C. H. C., Moens, L., di Prisco, G., Nadra, A. D., Estrin, D., Smulevich, G., Dewilde, S., Viappiani, C. & Verde, C., Dec 3 2012, In : PloS one. 7, 12, e44508.

Research output: Contribution to journalArticle

Exploring the diversity of Arctic eelpouts: First cytogenetic data on species of the genus Lycodes (Teleostei, Zoarcidae)

Ghigliotti, L., Møller, P. R., Cheng, C. H. C., Christiansen, J. S., Fevolden, S. E. & Pisano, E., Dec 2012, In : Marine Genomics. 8, p. 35-41 7 p.

Research output: Contribution to journalArticle

Karyotyping and cytogenetic mapping of Atlantic cod (Gadus morhua Linnaeus, 1758)

Ghigliotti, L., Fevolden, S. E., Cheng, C. H. C., Babiak, I., Dettai, A. & Pisano, E., Dec 1 2012, In : Animal genetics. 43, 6, p. 746-752 7 p.

Research output: Contribution to journalArticle

Molecular Ecophysiology of Antarctic Notothenioid Fishes

Cheng-De Vries, C-H. C. & Detrich, H. W., Feb 29 2012, Antarctic Ecosystems: An Extreme Environment in a Changing World. John Wiley and Sons, p. 355-378 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Phylogenetic footprints of an Antarctic radiation: The Trematominae (Notothenioidei, Teleostei)

Lautrédou, A. C., Hinsinger, D. D., Gallut, C., Cheng, C. H. C., Berkani, M., Ozouf-Costaz, C., Cruaud, C., Lecointre, G. & Dettai, A., Oct 1 2012, In : Molecular Phylogenetics and Evolution. 65, 1, p. 87-101 15 p.

Research output: Contribution to journalArticle

Protein genes in repetitive sequence-antifreeze glycoproteins in Atlantic cod genome

Zhuang, X., Yang, C., Fevolden, S. E. & Cheng, C. H. C., Jul 2 2012, In : BMC genomics. 13, 1, 293.

Research output: Contribution to journalArticle

2011

Assembly of the antifreeze glycoprotein/trypsinogen-like protease genomic locus in the Antarctic toothfish Dissostichus mawsoni (Norman)

Nicodemus-Johnson, J., Silic, S., Ghigliotti, L., Pisano, E. & Cheng, C. H. C., Sep 1 2011, In : Genomics. 98, 3, p. 194-201 8 p.

Research output: Contribution to journalArticle

Molecular Ecophysiology of Antarctic Notothenioid Fishes

Cheng-De Vries, C-H. C. & Detrich, H. W., Jan 1 2011, Antarctic Ecosystems: An Extreme Environment in a Changing World. Wiley, p. 355-378 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Structure and dynamics of Antarctic fish neuroglobin assessed by computer simulations

Boron, I., Russo, R., Boechi, L., Cheng, C. H. C., Di Prisco, G., Estrin, D. A., Verde, C. & Nadra, A. D., Mar 2011, In : IUBMB Life. 63, 3, p. 206-213 8 p.

Research output: Contribution to journalArticle

2010

A gene family-based method for interspecies comparisons of sequencing-based transcriptomes and its use in environmental adaptation analysis

Chen, Z., Ye, H., Zhou, L., Cheng, C. H. C. & Chen, L., Mar 1 2010, In : Journal of Genetics and Genomics. 37, 3, p. 205-218 14 p.

Research output: Contribution to journalArticle

Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict

Deng, C., Cheng, C. H. C., Ye, H., He, X. & Chen, L., Dec 14 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 50, p. 21593-21598 6 p.

Research output: Contribution to journalArticle

Fishing for data in the Ross Sea

Blight, L. K., Ainley, D. G., Ackley, S. F., Ballard, G., Ballerini, T., Brownell, R. L., Cheng, C. H. C., Chiantore, M., Costa, D., Coulter, M. C., Dayton, P., Devries, A. L., Dunbar, R., Earle, S., Eastman, J. T., Emslie, S. D., Evans, C. W., Garrott, R. A., Kim, S., Kooyman, G. & 13 others, Lescroël, A., Lizotte, M., Massaro, M., Olmastroni, S., Ponganis, P. J., Russell, J., Siniff, D. B., Smith, W. O., Stewart, B. S., Stirling, I., Willis, J., Wilson, P. & Woehler, E. J., Dec 3 2010, In : Science. 330, 6009, 1 p.

Research output: Contribution to journalLetter

ND6 Gene "lost" and found: Evolution of mitochondrial gene rearrangement in antarctic notothenioids

Zhuang, X. & Cheng, C. H. C., Jun 3 2010, In : Molecular biology and evolution. 27, 6, p. 1391-1403 13 p.

Research output: Contribution to journalArticle

Small-angle X-ray scattering studies of the intact eye lens: Effect of crystallin composition and concentration on microstructure

Mirarefi, A. Y., Boutet, S., Ramakrishnan, S., Kiss, A. J., Cheng, C. H. C., DeVries, A. L., Robinson, I. K. & Zukoski, C. F., Jun 1 2010, In : Biochimica et Biophysica Acta - General Subjects. 1800, 6, p. 556-564 9 p.

Research output: Contribution to journalArticle

2009

Cold-adapted Antarctic fish: The discovery of neuroglobin in the dominant suborder Notothenioidei

Cheng, C. H. C., di Prisco, G. & Verde, C., Mar 15 2009, In : Gene. 433, 1-2, p. 100-101 2 p.

Research output: Contribution to journalLetter

The "icefish paradox." Which is the task of neuroglobin in antarctic hemoglobin-less icefish?

Cheng, C. H. C., Di Prisco, G. & Verde, C., 2009, In : IUBMB Life. 61, 2, p. 184-188 5 p.

Research output: Contribution to journalComment/debate

2008

Adaptive evolution of hepcidin genes in antarctic notothenioid fishes

Xu, Q., Cheng, C. H. C., Hu, P., Ye, H., Chen, Z., Cao, L., Chen, L., Shen, Y. & Chen, L., Jun 1 2008, In : Molecular biology and evolution. 25, 6, p. 1099-1112 14 p.

Research output: Contribution to journalArticle

Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish

Chen, Z., Cheng, C. H. C., Zhang, J., Cao, L., Chen, L., Zhou, L., Jin, Y., Ye, H., Deng, C., Dai, Z., Xu, Q., Hu, P., Sun, S., Shen, Y. & Chen, L., Sep 2 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 35, p. 12944-12949 6 p.

Research output: Contribution to journalArticle

2007

Molecular ecophysiology of Antarctic notothenioid fishes

Cheng, C. H. C. & Detrich, H. W., Dec 29 2007, In : Philosophical Transactions of the Royal Society B: Biological Sciences. 362, 1488, p. 2215-2232 18 p.

Research output: Contribution to journalArticle

The two giant sister species of the Southern Ocean, Dissostichus eleginoides and Dissostichus mawsoni, differ in karyotype and chromosomal pattern of ribosomal RNA genes

Ghigliotti, L., Mazzei, F., Ozouf-Costaz, C., Bonillo, C., Williams, R., Cheng, C. H. C. & Pisano, E., Apr 1 2007, In : Polar Biology. 30, 5, p. 625-634 10 p.

Research output: Contribution to journalArticle

2006

A new species of nototheniid (Perciformes: Notothenioidei) fish from McMurdo Sound, Antarctica

Cziko, P. A. & Cheng, C. H. C., Dec 20 2006, In : Copeia. 4, p. 752-759 8 p.

Research output: Contribution to journalArticle

Freezing resistance of antifreeze-deficient larval Antarctic fish

Cziko, P. A., Evans, C. W., Cheng, C. H. C. & DeVries, A. L., Feb 2006, In : Journal of Experimental Biology. 209, 3, p. 407-420 14 p.

Research output: Contribution to journalArticle

Isolation and some characterisation of antifreeze protein from the European eelpout Zoarces viviparus

Sørensen, T. F., Cheng, C. H. C. & Ramløv, H., Nov 1 2006, In : Cryo-Letters. 27, 6, p. 387-399 13 p.

Research output: Contribution to journalArticle

Metabolic energy utilization during development of Antarctic naked dragonfish (Gymnodraco acuticeps)

Evans, C. W., Pace, L., Cziko, P. A., Marsh, A. G., Cheng, C. H. C. & Devries, A. L., May 1 2006, In : Polar Biology. 29, 6, p. 519-525 7 p.

Research output: Contribution to journalArticle

2005

Adaptations to an extreme environment: Retinal organisation and spectral properties of photoreceptors in Antarctic notothenioid fish

Pointer, M. A., Cheng, C. H. C., Bowmaker, J. K., Parry, J. W. L., Soto, N., Jeffery, G., Cowing, J. A. & Hunt, D. M., Jun 2005, In : Journal of Experimental Biology. 208, 12, p. 2363-2376 14 p.

Research output: Contribution to journalArticle

Antifreeze Proteins and Organismal Freezing Avoidance in Polar Fishes

DeVries, A. L. & Cheng, C. H. C., Dec 1 2005, In : Fish Physiology. 22, C, p. 155-201 47 p.

Research output: Contribution to journalReview article

Characterization of a multimer type III antifreeze protein gene from the Antarctic eel pout(Lycodichthys dearborni)

Yu, J., Cheng, C. H. C., DeVries, A. L. & Chen, L. B., Aug 1 2005, In : Acta Genetica Sinica. 32, 8, p. 789-794 6 p.

Research output: Contribution to journalArticle

Spawning behaviour and early development in the naked dragonfish Gymnodraco acuticeps

Evans, C. W., Cziko, P., Cheng, C. H. C. & Devries, A. L., Sep 1 2005, In : Antarctic Science. 17, 3, p. 319-327 9 p.

Research output: Contribution to journalArticle

2004

Cold-stable eye lens crystallins of the Antarctic nototheniid toothfish Dissostichus mawsoni Norman

Kiss, A. J., Mirarefi, A. Y., Ramakrishnan, S., Zukoski, C. F., DeVries, A. L. & Cheng, C. H. C., Dec 2004, In : Journal of Experimental Biology. 207, 26, p. 4633-4649 17 p.

Research output: Contribution to journalArticle