20012019

Research output per year

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Research Output

2019

Bacterial cyclopropane fatty acid synthase mRNA is targeted by activating and repressing small RNAs

Bianco, C. M., Fröhlich, K. S. A. & Vanderpoola, C. K., Oct 1 2019, In : Journal of bacteriology. 201, 19, e00461-19.

Research output: Contribution to journalArticle

Open Access
Open Access

Determinants of target prioritization and regulatory hierarchy for the bacterial small RNA SgrS

Bobrovskyy, M., Azam, M. S., Frandsen, J. K., Zhang, J., Poddar, A., Ma, X., Henkin, T. M., Ha, T. & Vanderpool, C. K., Oct 1 2019, In : Molecular Microbiology. 112, 4, p. 1199-1218 20 p.

Research output: Contribution to journalArticle

2018

Dual-function RNAs

Raina, M., King, A., Bianco, C. & Vanderpool, C. K., Oct 1 2018, In : Microbiology Spectrum. 6, 5, RWR-0032-2018.

Research output: Contribution to journalArticle

Translational regulation by bacterial small RNAs via an unusual Hfq-dependent mechanism

Azam, M. S. & Vanderpool, C. K., Jan 1 2018, In : Nucleic acids research. 46, 5, p. 2585-2599 15 p.

Research output: Contribution to journalArticle

2017

The small protein SgrT controls transport activity of the glucose-specific phosphotransferase system

Lloyd, C. R., Park, S., Fei, J. & Vanderpool, C. K., Jun 1 2017, In : Journal of bacteriology. 199, 11, e00869-16.

Research output: Contribution to journalArticle

2016

A Prophage-Encoded Small RNA Controls Metabolism and Cell Division in Escherichia coli

Balasubramanian, D., Ragunathan, P. T., Fei, J. & Vanderpool, C. K., Jan 1 2016, In : mSystems. 1, 1, e00021-15.

Research output: Contribution to journalArticle

CRISPR-Cas Gatekeeper: Slow on the Uptake but Gets the Job Done

Whitaker, R. J. & Vanderpool, C. K., Jan 1 2016, In : Cell Host and Microbe. 19, 2, p. 135-137 3 p.

Research output: Contribution to journalShort survey

Diverse mechanisms of post-transcriptional repression by the small RNA regulator of glucose-phosphate stress

Bobrovskyy, M. & Vanderpool, C. K., Jan 1 2016, In : Molecular Microbiology. 99, 2, p. 254-273 20 p.

Research output: Contribution to journalArticle

2015

Determination of in vivo target search kinetics of regulatory noncoding RNA

Fei, J., Singh, D., Zhang, Q., Park, S., Balasubramanian, D., Golding, I., Vanderpool, C. & Ha, T., Mar 20 2015, In : Science. 347, 6228, p. 1371-1374 4 p.

Research output: Contribution to journalArticle

Small RNAs regulate primary and secondary metabolism in gram-negative bacteria

Bobrovskyy, M., Vanderpool, C. K. & Richards, G. R., Jan 1 2015, In : Microbiology Spectrum. 3, 3, MBP-0009-2014.

Research output: Contribution to journalArticle

Talk among yourselves: RNA sponges mediate cross talk between functionally related messenger RNAs

Azam, M. S. & Vanderpool, C. K., Jun 3 2015, In : EMBO Journal. 34, 11, p. 1436-1438 3 p.

Research output: Contribution to journalArticle

Target activation by regulatory RNAs in bacteria

Papenfort, K. & Vanderpool, C. K., Jan 1 2015, In : FEMS Microbiology Reviews. 39, 3, p. 362-378 17 p.

Research output: Contribution to journalReview article

2014

The small RNA SgrS: Roles in metabolism and pathogenesis of enteric bacteria

Bobrovskyy, M. & Vanderpool, C., Jan 1 2014, In : Frontiers in Cellular and Infection Microbiology. 4, MAY, 61.

Research output: Contribution to journalShort survey

2013

Computational analysis of bacterial RNA-Seq data

McClure, R., Balasubramanian, D., Sun, Y., Bobrovskyy, M., Sumby, P., Genco, C. A., Vanderpool, C. K. & Tjaden, B., Aug 1 2013, In : Nucleic acids research. 41, 14, p. e140

Research output: Contribution to journalArticle

Deciphering the interplay between two independent functions of the small RNA regulator SgrS in Salmonella

Balasubramanian, D. & Vanderpool, C. K., Oct 18 2013, In : Journal of bacteriology. 195, 20, p. 4620-4630 11 p.

Research output: Contribution to journalArticle

Depletion of glycolytic intermediates plays a key role in glucose-phosphate stress in escherichia coli

Richards, G. R., Patel, M. V., Lloyd, C. R. & Vanderpool, C., Oct 28 2013, In : Journal of bacteriology. 195, 21, p. 4816-4825 10 p.

Research output: Contribution to journalArticle

New developments in post-transcriptional regulation for operons by small RNAs

Balasubramanian, D. & Vanderpool, C. K., Mar 2013, In : RNA Biology. 10, 3, p. 337-341 5 p.

Research output: Contribution to journalReview article

Physiological consequences of multiple-target regulation by the small RNA SgrS in escherichia coli

Sun, Y. & Vanderpool, C. K., Oct 28 2013, In : Journal of bacteriology. 195, 21, p. 4804-4815 12 p.

Research output: Contribution to journalArticle

Regulation of bacterial metabolism by small RNAs using diverse mechanisms

Bobrovskyy, M. & Vanderpool, C. K., Nov 2013, In : Annual Review of Genetics. 47, p. 209-232 24 p.

Research output: Contribution to journalReview article

Small RNA-mediated activation of sugar phosphatase mRNA regulates glucose homeostasis

Papenfort, K., Sun, Y., Miyakoshi, M., Vanderpool, C. K. & Vogel, J., Apr 11 2013, In : Cell. 153, 2, p. 426-437 12 p.

Research output: Contribution to journalArticle

2012

Small RNA binding-site multiplicity involved in translational regulation of a polycistronic mRNA

Rice, J. B., Balasubramanian, D. & Vanderpool, C. K., Oct 2 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 40, p. E2691-E2698

Research output: Contribution to journalArticle

2011

Combined experimental and computational strategies define an expansive regulon for GcvB small RNA

Vanderpool, C., Sep 1 2011, In : Molecular Microbiology. 81, 5, p. 1129-1132 4 p.

Research output: Contribution to journalComment/debate

Dual-function RNA regulators in bacteria

Vanderpool, C. K., Balasubramanian, D. & Lloyd, C. R., Nov 2011, In : Biochimie. 93, 11, p. 1943-1949 7 p.

Research output: Contribution to journalShort survey

Molecular call and response: The physiology of bacterial small RNAs

Richards, G. R. & Vanderpool, C. K., Oct 1 2011, In : Biochimica et Biophysica Acta - Gene Regulatory Mechanisms. 1809, 10, p. 525-531 7 p.

Research output: Contribution to journalReview article

Regulation and function of Escherichia coli sugar efflux transporter A (setA) during glucose-phosphate stress

Sun, Y. & Vanderpool, C. K., Jan 1 2011, In : Journal of bacteriology. 193, 1, p. 143-153 11 p.

Research output: Contribution to journalArticle

The small RNA SgrS controls sugar-phosphate accumulation by regulating multiple PTS genes

Rice, J. B. & Vanderpool, C. K., May 1 2011, In : Nucleic acids research. 39, 9, p. 3806-3819 14 p.

Research output: Contribution to journalArticle

2009

Characterization of homologs of the small rna sgrs reveals diversity in function

Wadler, C. S. & Vanderpool, C. K., Jul 20 2009, In : Nucleic acids research. 37, 16, p. 5477-5485 9 p., gkp591.

Research output: Contribution to journalArticle

Homologs of the small RNA SGRS are broadly distributed in enteric bacteria but have diverged in size and sequence

Horler, R. S. P. & Vanderpool, C. K., Jun 16 2009, In : Nucleic acids research. 37, 16, p. 5465-5476 12 p., gkp501.

Research output: Contribution to journalArticle

2008

Bridges cnd Chasms: Summary of the IMAGE 2 meeting in Montreal, Canada, 30 April to 3 May 2007

Bender, R. A., Downs, D., Kiley, P., LaRossa, R. A., Sonenshein, A. L., Storz, G., Bender, R., Roth, J., Schilling, C., Rine's, J., Merrick, M., Tyson, G., Skovran, E., Liao, J., Stephanopolous', G., Anesiades, N., San, K. Y., Durot, M., Reich, C., De Crecy-Legard, V. & 22 others, Dean's, D., Barras, F., Dwyer, D., De Reuse, H., Massé, E., Hwa, T., Vanderpool, C., Henkin's, T., Warner, D., Ron, E., Gourse, R., Wang, J., Nicholson, W., Burkholder, B., Gon, S., Ellison, M., Savchenko, A., Pichersky, E., Wanner, B., Mori, H., LaRossa, B. & Straight, P., Feb 2008, In : Journal of bacteriology. 190, 3, p. 792-797 6 p.

Research output: Contribution to journalArticle

2007

Physiological consequences of small RNA-mediated regulation of glucose-phosphate stress

Vanderpool, C. K., Apr 1 2007, In : Current Opinion in Microbiology. 10, 2, p. 146-151 6 p.

Research output: Contribution to journalReview article

The novel transcription factor SgrR coordinates the response to glucose-phosphate stress

Vanderpool, C. K. & Gottesman, S., Mar 1 2007, In : Journal of bacteriology. 189, 6, p. 2238-2248 11 p.

Research output: Contribution to journalArticle

2006

Heme transport contributes to in vivo fitness of Bordetella pertussis during primary infection in mice

Brickman, T. J., Vanderpool, C. K. & Armstrong, S. K., Mar 1 2006, In : Infection and immunity. 74, 3, p. 1741-1744 4 p.

Research output: Contribution to journalArticle

Small RNA regulators and the bacterial response to stress

Gottesman, S., McCullen, C. A., Guillier, M., Vanderpool, C., Majdalani, N., Benhammou, J., Thompson, K. M., FitzGerald, P. C., Sowa, N. A. & FitzGerald, D. J., Dec 1 2006, In : Cold Spring Harbor symposia on quantitative biology. 71, p. 1-11 11 p.

Research output: Contribution to journalArticle

2005

Bacterial small RNA regulators

Majdalani, N., Vanderpool, C. K. & Gottesman, S., Mar 1 2005, In : Critical Reviews in Biochemistry and Molecular Biology. 40, 2, p. 93-113 21 p.

Research output: Contribution to journalReview article

Effect of RyhB small RNA on global iron use in Escherichia coli

Massé, E., Vanderpool, C. K. & Gottesman, S., Oct 1 2005, In : Journal of bacteriology. 187, 20, p. 6962-6971 10 p.

Research output: Contribution to journalArticle

Noncoding RNAs at the membrane

Vanderpool, C. K. & Gottesman, S., Dec 1 2005, In : Nature Structural and Molecular Biology. 12, 4, p. 285-286 2 p.

Research output: Contribution to journalShort survey

2004
2003

Heme-responsive transcriptional activation of Bordetella bhu genes

Vanderpool, C. K. & Armstrong, S. K., Feb 1 2003, In : Journal of bacteriology. 185, 3, p. 909-917 9 p.

Research output: Contribution to journalArticle

2001

The bordetella bhu locus is required for heme iron utilization

Vanderpool, C. K. & Armstrong, S. K., Jul 4 2001, In : Journal of bacteriology. 183, 14, p. 4278-4287 10 p.

Research output: Contribution to journalArticle