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Research Output

  • 68 Article
  • 7 Conference contribution
  • 4 Chapter
  • 3 Comment/debate
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Article
2019

Correction Factors for δ18O-Derived Global Sea Surface Temperature Reconstructions From Diagenetically Altered Intervals of Coral Skeletal Density Banding

Sivaguru, M., Fouke, K. W., Todorov, L., Kingsford, M. J., Fouke, K. E., Trop, J. M. & Fouke, B. W., Jun 18 2019, In : Frontiers in Marine Science. 6, JUN, 306.

Research output: Contribution to journalArticle

Open Access

Motility of Shewanella oneidensis MR-1 Allows for Nitrate Reduction in the Toxic Region of a Ciprofloxacin Concentration Gradient in a Microfluidic Reactor

Alcalde, R. E., Michelson, K., Zhou, L., Schmitz, E. V., Deng, J., Sanford, R. A., Fouke, B. W. & Werth, C. J., Mar 5 2019, In : Environmental Science and Technology. 53, 5, p. 2778-2787 10 p.

Research output: Contribution to journalArticle

Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats

Dong, Y., Sanford, R. A., Inskeep, W. P., Srivastava, V., Bulone, V., Fields, C. J., Yau, P. M., Sivaguru, M., Ahrén, D., Fouke, K. W., Weber, J., Werth, C. R., Cann, I. K., Keating, K. M., Khetani, R. S., Hernandez, A. G., Wright, C., Band, M., Imai, B. S., Fried, G. A. & 1 others, Fouke, B. W., Dec 2019, In : Astrobiology. 19, 12, p. 1442-1458 17 p.

Research output: Contribution to journalArticle

Open Access
2018

Geobiology reveals how human kidney stones dissolve in vivo

Sivaguru, M., Saw, J. J., Williams, J. C., Lieske, J. C., Krambeck, A. E., Romero, M. F., Chia, N., Schwaderer, A. L., Alcalde, R. E., Bruce, W. J., Wildman, D. E., Fried, G. A., Werth, C. J., Reeder, R. J., Yau, P. M., Sanford, R. A. & Fouke, B. W., Dec 1 2018, In : Scientific reports. 8, 1, 13731.

Research output: Contribution to journalArticle

2017

Dolomite, very high-magnesium calcite, and microbes— implications for the microbial model of dolomitization

Kaczmarek, S. E., Gregg, J. M., Bish, D. L., Machel, H. G. & Fouke, B. W., Jan 1 2017, In : SEPM Special Publications. 109, p. 7-20 14 p.

Research output: Contribution to journalArticle

Effects of Mineral Surface Properties on Supercritical CO2 Wettability in a Siliciclastic Reservoir

Botto, J., Fuchs, S. J., Fouke, B. W., Clarens, A. F., Freiburg, J. T., Berger, P. M. & Werth, C. J., May 18 2017, In : Energy and Fuels. 31, 5, p. 5275-5285 11 p.

Research output: Contribution to journalArticle

Hematite Reduction Buffers Acid Generation and Enhances Nutrient Uptake by a Fermentative Iron Reducing Bacterium, Orenia metallireducens Strain Z6

Dong, Y., Sanford, R. A., Chang, Y. J., McInerney, M. J. & Fouke, B. W., Jan 3 2017, In : Environmental Science and Technology. 51, 1, p. 232-242 11 p.

Research output: Contribution to journalArticle

Hydraulic Evaluation of the Design and Operation of Ancient Rome's Anio Novus Aqueduct

Motta, D., Keenan-Jones, D., Garcia, M. H. & Fouke, B. W., Dec 2017, In : Archaeometry. 59, 6, p. 1150-1174 25 p.

Research output: Contribution to journalArticle

Site-based data curation based on hot spring geobiology

Palmer, C. L., Thomer, A. K., Baker, K. S., Wickett, K. M., Hendrix, C. L., Rodman, A., Sigler, S. & Fouke, B. W., Mar 2017, In : PloS one. 12, 3, e0172090.

Research output: Contribution to journalArticle

2016

Orenia metallireducens sp. nov. strain Z6, a novel metal-reducing member of the phylum firmicutes from the deep subsurface

Dong, Y., Sanford, R. A., Boyanov, M. I., Kemner, K. M., Flynn, T. M., O'Loughlin, E. J., Chang, Y. J., Locke, R. A., Weber, J. R., Egan, S. M., Mackie, R. I., Cann, I. & Fouke, B. W., Jan 1 2016, In : Applied and environmental microbiology. 82, 21, p. 6440-6453 14 p.

Research output: Contribution to journalArticle

Proteomic analysis of a poplar cell suspension culture suggests a major role of protein S-acylation in diverse cellular processes

Srivastava, V., Weber, J. R., Malm, E., Fouke, B. W. & Bulone, V., Apr 12 2016, In : Frontiers in Plant Science. 7, APR2016, 477.

Research output: Contribution to journalArticle

Tepidibacillus decaturensis sp. nov., a microaerophilic, moderately thermophilic iron-reducing bacterium isolated from 1.7 km depth groundwater

Dong, Y., Sanford, R. A., Boyanov, M. I., Kemner, K. M., Flynn, T. M., O’Loughlin, E. J., Locke, R. A., Weber, J. R., Egan, S. M. & Fouke, B. W., Oct 2016, In : International Journal of Systematic and Evolutionary Microbiology. 66, 10, p. 3964-3971 8 p., 001295.

Research output: Contribution to journalArticle

2015

Metabolism-Induced CaCO3 Biomineralization during Reactive Transport in a Micromodel: Implications for Porosity Alteration

Singh, R., Yoon, H., Sanford, R. A., Katz, L., Fouke, B. W. & Werth, C. J., Oct 20 2015, In : Environmental Science and Technology. 49, 20, p. 12094-12104 11 p.

Research output: Contribution to journalArticle

Travertine-based estimates of the amount of water supplied by ancient Rome's Anio Novus aqueduct

Keenan-Jones, D., Motta, D., Garcia, M. H. & Fouke, B. W., Sep 1 2015, In : Journal of Archaeological Science: Reports. 3, p. 1-10 10 p.

Research output: Contribution to journalArticle

2014

Coral-zooxanthellae meta-transcriptomics reveals integrated response to pollutant stress

Gust, K. A., Najar, F. Z., Habib, T., Lotufo, G. R., Piggot, A. M., Fouke, B. W., Laird, J. G., Wilbanks, M. S., Rawat, A., Indest, K. J., Roe, B. A. & Perkins, E. J., Jul 12 2014, In : BMC genomics. 15, 1, 591.

Research output: Contribution to journalArticle

Halomonas sulfidaeris-dominated microbial community inhabits a 1.8 km-deep subsurface Cambrian sandstone reservoir

Dong, Y., Kumar, C. G., Chia, N., Kim, P. J., Miller, P. A., Price, N. D., Cann, I. K. O., Flynn, T. M., Sanford, R. A., Krapac, I. G., Locke, R. A., Hong, P. Y., Tamaki, H., Liu, W. T., Mackie, R. I., Hernandez, A. G., Wright, C. L., Mikel, M. A., Walker, J. L., Sivaguru, M. & 3 others, Fried, G., Yannarell, A. C. & Fouke, B. W., 2014, In : Environmental Microbiology. 16, 6, p. 1695-1708 14 p.

Research output: Contribution to journalArticle

Influence of Mg2+ on CaCO3 precipitation during subsurface reactive transport in a homogeneous silicon-etched pore network

Boyd, V., Yoon, H., Zhang, C., Oostrom, M., Hess, N., Fouke, B., Valocchi, A. J. & Werth, C. J., Jun 15 2014, In : Geochimica et Cosmochimica Acta. 135, p. 321-335 15 p.

Research output: Contribution to journalArticle

Site based data curation: Developing a data portal for geobiologists at yellowstone National Park

Gordon, S. C., Thomer, A. K., DiLauro, T., Jett, J. G., Fouke, B. W. & Palmer, C. L., Jan 1 2014, In : Proceedings of the ASIST Annual Meeting. 51, 1

Research output: Contribution to journalArticle

Temperature and injection water source influence microbial community structure in four Alaskan North Slope hydrocarbon reservoirs

Piceno, Y. M., Reid, F. C., Tom, L. M., Conrad, M. E., Bill, M., Hubbard, C. G., Fouke, B. W., Graff, C. J., Han, J., Stringfellow, W. T., Hanlon, J. S., Hu, P., Hazen, T. C. & Andersen, G. L., Jan 1 2014, In : Frontiers in Microbiology. 5, AUG, 00409.

Research output: Contribution to journalArticle

2013

Building a framework for site-based data curation

Palmer, C. L., Thomer, A. K., Baker, K. S., Wickett, K. M., Varvel, V., Choudhury, S., DiLauro, T., Fouke, B. W. & Asangba, A. E., 2013, In : Proceedings of the ASIST Annual Meeting. 50, 1

Research output: Contribution to journalArticle

Metagenome sequence analysis of filamentous microbial communities obtained from geochemically distinct geothermal channels reveals specialization of three aquificales lineages

Takacs-Vesbach, C., Inskeep, W. P., Jay, Z. J., Herrgard, M. J., Rusch, D. B., Tringe, S. G., Kozubal, M. A., Hamamura, N., Macur, R. E., Fouke, B. W., Reysenbach, A. L., McDermott, T. R., Jennings, R. D. M., Hengartner, N. W. & Xie, G., Jan 1 2013, In : Frontiers in Microbiology. 4, MAY

Research output: Contribution to journalArticle

2012

Sea-level rise, depth-dependent carbonate sedimentation and the paradox of drowned platforms

Kim, W., Fouke, B. W., Petter, A. L., Quinn, T. M., Kerans, C. & Taylor, F., Oct 1 2012, In : Sedimentology. 59, 6, p. 1677-1694 18 p.

Research output: Contribution to journalArticle

2011

Coral black band disease microbial communities and genotypic variability of the dominant cyanobacteria (CD1C11)

Klaus, J. S., Janse, I. & Fouke, B. W., Oct 1 2011, In : Bulletin of Marine Science. 87, 4, p. 795-821 27 p.

Research output: Contribution to journalArticle

2010

Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function

Inskeep, W. P., Rusch, D. B., Jay, Z. J., Herrgard, M. J., Kozubal, M. A., Richardson, T. H., Macur, R. E., Hamamura, N., Jennings, R. D. M., Fouke, B. W., Reysenbach, A. L., Roberto, F., Young, M., Schwartz, A., Boyd, E. S., Badger, J. H., Mathur, E. J., Ortmann, A. C., Bateson, M., Geesey, G. & 1 others, Frazier, M., Dec 1 2010, In : PloS one. 5, 3, e9773.

Research output: Contribution to journalArticle

Pore-scale study of transverse mixing induced CaCO3 precipitation and permeability reduction in a model subsurface sedimentary system

Zhang, C., Dehoff, K., Hess, N., Oostrom, M., Wietsma, T. W., Valocchi, A. J., Fouke, B. W. & Werth, C. J., Oct 15 2010, In : Environmental Science and Technology. 44, 20, p. 7833-7838 6 p.

Research output: Contribution to journalArticle

Secondary minerals associated with geothermal features of yellowstone national park

Inskeep, W., Nordstrom, D. K., Mogk, D. W., Rodman, A. W., Fouke, B. W., Durães, N. & Guzman, M., Dec 1 2010, In : CMS Workshop Lectures. 17, p. 24-51 28 p.

Research output: Contribution to journalArticle

The role of calcining and basal fluidization in the long runout of carbonate slides: An example from the Heart Mountain slide block, Wyoming and Montana, U.S.A

Anders, M. H., Fouke, B. W., Zerkle, A. L., Tavarnelli, E., Alvarez, W. & Harlow, G. E., Nov 1 2010, In : Journal of Geology. 118, 6, p. 577-599 23 p.

Research output: Contribution to journalArticle

2009

Major earthquakes recorded by Speleothems in Midwestern U.S. caves

Panno, S. V., Lundstrom, C. C., Hackley, K. C., Curry, B. B., Fouke, B. W. & Zhang, Z., Aug 1 2009, In : Bulletin of the Seismological Society of America. 99, 4, p. 2147-2154 8 p.

Research output: Contribution to journalArticle

2008

Microbial biomass: A catalyst for CaCO3 precipitation in advection-dominated transport regimes

Kandianis, M. T., Fouke, B. W., Johnson, R. W., Veysey, J. & Inskeep, W. P., Mar 1 2008, In : Bulletin of the Geological Society of America. 120, 3-4, p. 442-450 9 p.

Research output: Contribution to journalArticle

Reconstruction of water temperature, pH, and flux of ancient Hot Springs from travertine depositional facies

Veysey, J., Fouke, B. W., Kandiannis, M. T., Schickel, T. J., Johnson, R. W. & Goldenfeld, N., Jan 1 2008, In : Journal of Sedimentary Research. 78, 2, p. 69-76 8 p.

Research output: Contribution to journalArticle

2007

Coral microbial communities, zooxanthellae and mucus along gradients of seawater depth and coastal pollution

Klaus, J. S., Janse, I., Heikoop, J. M., Sanford, R. A. & Fouke, B. W., May 1 2007, In : Environmental Microbiology. 9, 5, p. 1291-1305 15 p.

Research output: Contribution to journalArticle

Environmental controls on corallite morphology in the reef coral Montastraea annularis

Klaus, J. S., Budd, A. F., Heikoop, J. M. & Fouke, B. W., Jan 1 2007, In : Bulletin of Marine Science. 80, 1, p. 233-260 28 p.

Research output: Contribution to journalArticle

2005

Bacterial communities inhabiting the healthy tissues of two Caribbean reef corals: Interspecific and spatial variation

Klaus, J. S., Frias-Lopez, J., Bonheyo, G. T., Heikoop, J. M. & Fouke, B. W., Mar 1 2005, In : Coral Reefs. 24, 1, p. 129-137 9 p.

Research output: Contribution to journalArticle

Basin-to-platform chemostratigraphy and diagenesis of the Early Cretaceous Vercors Carbonate Platform, SE France

Fouke, B. W., Schlager, W., Vandamme, M. G. M., Henderiks, J. & Van Hilten, B., Apr 15 2005, In : Sedimentary Geology. 175, 1-4 SPEC. ISS., p. 297-314 18 p.

Research output: Contribution to journalArticle

Chicxulub impact ejecta deposits in southern Quintana Roo, México, and central Belize

Pope, K. O., Ocampo, A. C., Fischer, A. G., Vega, F. J., Ames, D. E., King, D. T., Fouke, B. W., Wachtman, R. J. & Kletetschka, G., Jan 1 2005, In : Special Paper of the Geological Society of America. 384, p. 171-190 20 p.

Research output: Contribution to journalArticle

Geochemistry of speleothem records from southern Illinois: Development of (234U)/(238U) as a proxy for paleoprecipitation

Zhou, J., Lundstrom, C. C., Fouke, B., Panno, S., Hackley, K. & Curry, B., Sep 5 2005, In : Chemical Geology. 221, 1-2, p. 1-20 20 p.

Research output: Contribution to journalArticle

2004

Bacterial community associated with black band disease in corals

Frias-Lopez, J., Klaus, J. S., Bonheyo, G. T. & Fouke, B. W., Oct 1 2004, In : Applied and environmental microbiology. 70, 10, p. 5955-5962 8 p.

Research output: Contribution to journalArticle

Bacterial sulfate reduction limits natural arsenic contamination in groundwater

Kirk, M. F., Holm, T. R., Park, J., Jin, Q., Sanford, R. A., Fouke, B. W. & Bethke, C. M., Nov 1 2004, In : Geology. 32, 11, p. 953-956 4 p.

Research output: Contribution to journalArticle

Identification of differential gene expression in bacteria associated with coral black band disease by using RNA-arbitrarily primed PCR

Frias-Lopez, J., Bonheyo, G. T. & Fouke, B. W., Jun 1 2004, In : Applied and environmental microbiology. 70, 6, p. 3687-3694 8 p.

Research output: Contribution to journalArticle

Lipid biomarkers and carbon-isotopes of modern travertine deposits (Yellowstone National Park, USA): Implications for biogeochemical dynamics in hot-spring systems

Zhang, C. L., Fouke, B. W., Bonheyo, G. T., Peacock, A. D., White, D. C., Huang, Y. & Romanek, C. S., Aug 1 2004, In : Geochimica et Cosmochimica Acta. 68, 15, p. 3157-3169 13 p.

Research output: Contribution to journalArticle