Alexander Edward Lipka

20062019
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  • 1 Similar Profiles
Zea mays Medicine & Life Sciences
Genome-Wide Association Study Medicine & Life Sciences
Quantitative Trait Loci Medicine & Life Sciences
corn Agriculture & Biology
chromosome mapping Agriculture & Biology
Genome Medicine & Life Sciences
quantitative trait loci Agriculture & Biology
Single Nucleotide Polymorphism Medicine & Life Sciences

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Research Output 2006 2019

Genomic selection using maize ex-plant variety protection germplasm for the prediction of nitrogen-use traits

Mastrodomenico, A. T., Bohn, M. O., Lipka, A. E. & Below, F. E., Jan 1 2019, In : Crop Science. 59, 1, p. 212-220 9 p.

Research output: Contribution to journalArticle

plant variety protection
marker-assisted selection
germplasm
prediction
corn

polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids

Clark, L. V., Lipka, A. E. & Sacks, E. J., Mar 7 2019, In : G3 (Bethesda, Md.). 9, 3, p. 663-673 11 p.

Research output: Contribution to journalArticle

Open Access
Polyploidy
Diploidy
Uncertainty
Genotype
Population

Winter hardiness of Miscanthus (II): Genetic mapping for overwintering ability and adaptation traits in three interconnected Miscanthus populations

Dong, H., Liu, S., Clark, L. V., Sharma, S., Gifford, J. M., Juvik, J. A., Lipka, A. E. & Sacks, E. J., Jan 1 2019, In : GCB Bioenergy.

Research output: Contribution to journalArticle

winter hardiness
Miscanthus
overwintering
chromosome mapping
winter

An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels

Shenstone, E., Cooper, J., Rice, B., Bohn, M. O., Jamann, T. M. & Lipka, A. E., Jan 1 2018, In : PLoS One. 13, 11, p. e0207752

Research output: Contribution to journalArticle

Sorghum
Zea mays
Logistics
Logistic Models
Genome-Wide Association Study

An assessment of true and false positive detection rates of stepwise epistatic model selection as a function of sample size and number of markers

Chen, A. H., Ge, W., Metcalf, W., Jakobsson, E., Mainzer, L. S. & Lipka, A. E., Jan 1 2018, (Accepted/In press) In : Heredity.

Research output: Contribution to journalArticle

Sample Size
Gene Frequency
Zea mays
Nucleotides
Genome

Datasets

RAD-seq genotypes for a Miscanthus sinensis diversity panel

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Głowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator), Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Jul 27 2019

Dataset

Data from: Genome-wide association and genomic prediction for biomass yield in Miscanthus sinensis phenotyped in Asia and North America

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Głowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator), Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Nov 29 2017

Dataset

Scripts for testing the error rate of polyRAD

Clark, L. V. (Creator), Lipka, A. E. (Creator), Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Nov 21 2018

Dataset