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Aleksei Aksimentiev

19982019
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Nanopores Engineering & Materials Science
deoxyribonucleic acid Physics & Astronomy
DNA Engineering & Materials Science
Molecular dynamics Chemical Compounds
molecular dynamics Physics & Astronomy
membranes Physics & Astronomy
Computer simulation Chemical Compounds
Proteins Engineering & Materials Science

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Research Output 1998 2019

Atoms to Phenotypes: Molecular Design Principles of Cellular Energy Metabolism

Singharoy, A., Maffeo, C., Delgado-Magnero, K. H., Swainsbury, D. J. K., Sener, M., Kleinekathöfer, U., Vant, J. W., Nguyen, J., Hitchcock, A., Isralewitz, B., Teo, I., Chandler, D. E., Stone, J. E., Phillips, J. C., Pogorelov, T. V., Mallus, M. I., Chipot, C., Luthey-Schulten, Z., Tieleman, D. P., Hunter, C. N. & 3 others, Tajkhorshid, E., Aksimentiev, A. & Schulten, K., Nov 14 2019, In : Cell. 179, 5, p. 1098-1111.e23

Research output: Contribution to journal › Article

Chromatophores
Energy conversion
Energy Metabolism
Phenotype
Atoms

Characterization of the Lipid Structure and Fluidity of Lipid Membranes on Epitaxial Graphene and Their Correlation to Graphene Features

Farell, M., Wetherington, M., Shankla, M., Chae, I., Subramanian, S., Kim, S. H., Aksimentiev, A., Robinson, J. & Kumar, M., Apr 2 2019, In : Langmuir. 35, 13, p. 4726-4735 10 p.

Research output: Contribution to journal › Article

Graphite
Fluidity
Membrane Lipids
Graphene
Lipids

Controlling aggregation of cholesterol-modified DNA nanostructures

Ohmann, A., Göpfrich, K., Joshi, H., Thompson, R. F., Sobota, D., Ranson, N. A., Aksimentiev, A. & Keyser, U. F., Dec 2 2019, In : Nucleic acids research. 47, 21, p. 11441-11451 11 p.

Research output: Contribution to journal › Article

Open Access
Nanostructures
Cholesterol
DNA
Nanotechnology
Molecular Dynamics Simulation

Electro-mechanical conductance modulation of a nanopore using a removable gate

Zhao, S., Restrepo-Pérez, L., Soskine, M., Maglia, G., Joo, C., Dekker, C. & Aksimentiev, A., Feb 26 2019, In : ACS Nano. 13, 2, p. 2398-2409 12 p.

Research output: Contribution to journal › Article

Nanopores
Peptides
Modulation
peptides
modulation

Molecular Mechanism of Spontaneous Nucleosome Unraveling

Winogradoff, D. & Aksimentiev, A., Jan 18 2019, In : Journal of Molecular Biology. 431, 2, p. 323-335 13 p.

Research output: Contribution to journal › Article

Nucleosomes
DNA
Histones
Respiration
Molecular Dynamics Simulation

Datasets

Experiment and simulation raw data for "Electrical recognition of the twenty proteinogenic amino acids using an aerolysin nanopore"

Ouldali, H. (Creator), Sarthak, K. (Creator), Ensslen, T. (Creator), Piguet, F. (Creator), Manivet, P. (Creator), Pelta, J. (Creator), Behrends, J. C. (Creator), Aksimentiev, A. (Creator), Oukhaled, A. (Creator), University of Illinois at Urbana-Champaign, Oct 23 2019

DOI: 10.13012/B2IDB-4905767_V1

Dataset