Datasets

Data from: Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge

Molloy, E. K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, May 16 2019

Dataset

Datasets from the study "OCTAL: Optimal Completion of Gene Trees in Polynomial Time"

Christensen, S. (Creator), Molloy, E. K. (Creator), Vachaspati, P. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Feb 22 2018

Dataset

Data from: Genome-wide association and genomic prediction for biomass yield in Miscanthus sinensis phenotyped in Asia and North America

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Głowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator) & Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Nov 29 2017

Dataset

PASTA For Proteins Data (BALiBASE)

Collins, K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Apr 6 2018

Dataset

Datasets from the study: Optimal completion of incomplete gene trees in polynomial time using OCTAL

Christensen, S. (Creator), Molloy, E. K. (Creator), Vachaspati, P. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jun 15 2017

Dataset

Data from: Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss

Legried, B. (Creator), Molloy, E. K. (Creator), Warnow, T. (Creator) & Roch, S. (Creator), University of Illinois at Urbana-Champaign, Jan 22 2020

Dataset

HIPPI Dataset

Nguyen, N. (Creator), Nute, M. (Creator), Mirarab, S. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Aug 16 2016

Dataset

Scripts for testing the error rate of polyRAD

Clark, L. V. (Creator), Lipka, A. E. (Creator) & Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Nov 21 2018

Dataset

Data from: The Performance of Coalescent-Based Species Tree Estimation Methods under Models of Missing Data

Nute, M. (Creator), Jed, C. (Creator), Molloy, E. K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Sep 19 2017

Dataset

Data from TRACTION: Fast non-parametric improvement of estimated gene trees

Christensen, S. (Creator), Molloy, E. K. (Creator), Vachaspati, P. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jul 29 2019

Dataset

Data from: TreeMerge: A new method for improving the scalability of species tree estimation methods

Molloy, E. K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Mar 19 2019

Dataset

Miscanthus sinensis multi-location trial: phenotypic analysis, genome-wide association, and genomic prediction

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Ghimire, B. K. (Creator), Głowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator) & Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Mar 25 2019

Dataset

Data from: FastMulRFS: Statistically consistent polynomial time species tree estimation under gene duplication

Molloy, E. K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Nov 11 2019

Dataset

Using INC within Divide-and-Conquer Phylogeny Estimation - Datasets

Le, T. (Creator), Sy, A. (Creator), Molloy, E. K. (Creator), Zhang, Q. (Creator), Rao, S. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jan 27 2019

Dataset

Data from: Polynomial-Time Statistical Estimation of Species Trees under Gene Duplication and Loss

Legried, B. (Creator), Molloy, E. K. (Creator), Warnow, T. (Creator) & Roch, S. (Creator), University of Illinois at Urbana-Champaign, Jul 15 2020

Dataset

NJMerge: A generic technique for scaling phylogeny estimation methods and its application to species trees

Molloy, E. K. (Creator) & Warnow, T. (Creator), University of Illinois at Urbana-Champaign, Jul 29 2018

Dataset

RAD-seq genotypes for a Miscanthus sinensis diversity panel

Clark, L. V. (Creator), Dwiyanti, M. S. (Creator), Anzoua, K. G. (Creator), Brummer, J. E. (Creator), Glowacka, K. (Creator), Hall, M. (Creator), Heo, K. (Creator), Jin, X. (Creator), Lipka, A. E. (Creator), Peng, J. (Creator), Yamada, T. (Creator), Yoo, J. H. (Creator), Yu, C. Y. (Creator), Zhao, H. (Creator), Long, S. P. (Creator) & Sacks, E. J. (Creator), University of Illinois at Urbana-Champaign, Jul 27 2019

Dataset