Plant Biology

Research Output

Research Output per year

1975 2020

• 1818 Article
• 120 Review article
• 52 Chapter
• 33 Comment/debate
• 80 More
  • 19 Letter
  • 17 Editorial
  • 16 Book
  • 11 Conference contribution
  • 7 Short survey
  • 4 Paper
  • 3 Foreword/postscript
  • 3 Conference article

Research Output per year

Research Output per year

Search results

• Chapter

  Advances in Coffea Genomics

  Kochko, A. D., Campa, C., Guyot, R., Hamon, P., Poncet, V., Tranchant-Dubreuil, C., Hamon, S., Akaffou, S., Andrade, A. C., Crouzillat, D., Ming, R. & Mueller, L. A., Jan 1 2010, Advances in Botanical Research. C ed. p. 23-63 41 p. (Advances in Botanical Research; vol. 53, no. C).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Coffea
  • Coffea canephora
  • genomics
  • genome
  • microsatellite repeats

• Anthropogenic disturbance in tropical forests: Toward a functional understanding of seedling responses

  Dalling, J. W. & Burslem, D. F. R. P., Jan 1 2008, Seedling Ecology and Evolution. Cambridge University Press, p. 332-351 20 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Seedlings
  • Forests
  • anthropogenic activities
  • tropical forests
  • seedlings

• Big data in agriculture and their analyses

  Shrivastava, S. & Marshall-Colon, A., Jan 1 2018, Encyclopedia of Food Security and Sustainability. Elsevier, p. 233-237 5 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Big Data
  • Agriculture
  • Big data
  • agricultural statistics
  • agriculture

• Carbon and nitrogen metabolism and reversible protein phosphorylation

  Toroser, D. & Huber, S. C., Jan 1 2000, Advances in Botanical Research. Academic Press Inc., p. 435-458 24 p. (Advances in Botanical Research; vol. 32).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Celluloid entomology

  Berenbaum, M. R. & Leskosky, R. J., Dec 1 2005, Entomology at the Land Grant University: Perspectives from the Texas A&M University Department Centenary. Texas A&M University Press, p. 195-206 12 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • popular culture
  • music
  • biology
  • art
  • Sports

• Chemical Mediation of Host-Plant Specialization: The Papilionid Paradigm

  Berenbaum, M. R. & Feeny, P. P., Jan 3 2008, Specialization, Speciation, and Radiation: The Evolutionary Biology of Herbivorous Insects. Tilmon, K. (ed.). University of California Press, p. 3-19 17 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • host plants
  • Lepidoptera
  • Pheromones
  • allomones
  • Cues

• Cloning major genes controlling fruit flesh color in papaya

  Aryal, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 341-353 13 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Coffee germplasm resources, genomics, and breeding

  Vega, F. E., Ebert, A. W. & Ming, R., Jan 1 2008, Plant Breeding Reviews. John Wiley and Sons Inc., Vol. 30. p. 415-447 33 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Colonization of seeds by soilborne fungi: Linking seed dormancy-defense syndromes, evolutionary constraints, and fungal traits

  Stump, S. M., Sarmiento, C., Zalamea, P. C., Dalling, J. W., Davis, A. S., Shaffer, J. P. & Arnold, A. E., Apr 5 2019, Seed Endophytes: Biology and Biotechnology. Springer International Publishing, p. 465-481 17 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Plant Dormancy
  • Fungi
  • seed dormancy
  • Seed
  • Seeds

• Crop photosynthesis

  Earl, H., Bernacchi, C. J. & Medrano, H., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 506-520 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Photosynthesis
  • photosynthesis
  • crops
  • Agricultural Crops
  • Solar Energy

• Direct Effects of Rising Atmospheric Carbon Dioxide and Ozone on Crop Yields

  Ainsworth, E. A. & McGrath, J. M., Jan 1 2010, Advances in Global Change Research. Springer International Publishing, p. 109-130 22 p. (Advances in Global Change Research; vol. 37).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • atmospheric carbon dioxide
  • crop yield
  • ozone
  • crop
  • air

• Efforts to deregulate Rainbow papaya in Japan: Molecular characterization of transgene and vector inserts

  Suzuki, J. Y., Tripathi, S., Fermín, G. A., Jan, F. J., Hou, S., Saw, J. H., Ackerman, C. M., Yu, Q., Schatz, M. C., Pitz, K. Y., Yépes, M., Fitch, M. M. M., Manshardt, R. M., Slightom, J. L., Ferreira, S. A., Salzberg, S. L., Alam, M., Ming, R., Moore, P. H. & Gonsalves, D., Jan 31 2010, Acta Horticulturae. International Society for Horticultural Science, p. 235-240 6 p. (Acta Horticulturae; vol. 851).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • papayas
  • transgenes
  • Japan
  • plasmids
  • imports

• Fossil pollen and spores in paleoecology

  Mander, L. & Punyasena, S. W., Jan 1 2018, Vertebrate Paleobiology and Paleoanthropology. Springer, p. 215-234 20 p. (Vertebrate Paleobiology and Paleoanthropology).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • paleoecology
  • fossils
  • species abundance
  • spore
  • pollen

• Functional Analysis and Phosphorylation Site Mapping of Leucine-Rich Repeat Receptor-Like Kinases

  Clouse, S. D., Goshe, M. B., Huber, S. C. & Li, J., Jan 7 2008, Plant Proteomics: Technologies, Strategies, and Applications. John Wiley & Sons, Inc., p. 469-483 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Gas-exchange analysis: Basics and problems

  Bernacchi, C., Diaz-Espejo, A. & Flexas, J., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 115-130 16 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • gas exchange
  • Gases
  • Photosynthesis
  • photosynthesis
  • gases

• Genetics of Secondary Metabolism and Herbivore Resistance in Plants

  Berenbaum, M. R. & Zangerl, A. R., Dec 2 1992, Herbivores: Their Interactions with Secondary Plant Metabolites: Volume II: Ecological and Evolutionary Processes. Rosenthal, G. A. & Berenbaum, M. R. (eds.). 2 ed. Academic Press, p. 415-438 24 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Genomics of papaya sex chromosomes

  VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 309-326 18 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Global change and photosynthesis

  Bernacchi, C. J., Calfapietra, C., Centritto, M. & Valladares, F., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 537-545 9 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Photosynthesis
  • global change
  • photosynthesis
  • Biota
  • Planets

• Insect Biodiversity - Millions and Millions

  Berenbaum, M. R., Mar 30 2009, Insect Biodiversity: Science and Society. John Wiley and Sons, p. 575-582 8 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Insights into the Common Ancestor of Eudicots

  Li, J., Tang, H., Bowers, J. E., Ming, R. & Paterson, A. H., 2014, Advances in Botanical Research. Academic Press Inc., p. 137-174 38 p. (Advances in Botanical Research; vol. 69).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • ancestry
  • genome
  • Angiospermae
  • Cretaceous period
  • gene order

• Late-Quaternary Environmental and Ecological History of the Arctic Foothills, Northern Alaska

  Wyatt Oswald, W., Brubaker, L. B., Hu, F. S. & Kling, G. W., Mar 27 2014, Alaska's Changing Arctic: Ecological Consequences for Tundra, Streams, and Lakes. Oxford University Press

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Climate Change
  • environmental history
  • Pollen
  • Ecosystem
  • Arctic region

• Measurement of chloroplast ATP synthesis activity in Arabidopsis

  Grennan, A. K. & Ort, D. R., Oct 24 2011, Chloroplast Research in Arabidopsis: Methods and Protocols, Volume II. Vol. 775. p. 343-355 13 p. (Methods in Molecular Biology; vol. 775).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Chloroplasts
  • Arabidopsis
  • Adenosine Triphosphate
  • Thylakoids
  • Luciferases

• Miscanthus. A Promising Biomass Crop

  Heaton, E. A., Dohleman, F. G., Miguez, A. F., Juvik, J. A., Lozovaya, V., Widholm, J., Zabotina, O. A., McIsaac, G. F., David, M. B., Voigt, T. B., Boersma, N. N. & Long, S. P., 2010, Advances in Botanical Research. C ed. Academic Press Inc., p. 75-137 63 p. (Advances in Botanical Research; vol. 56, no. C).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Miscanthus
  • energy crops
  • Miscanthus giganteus
  • crops
  • hydrology

• Models of photosynthesis

  Diaz-Espejo, A., Bernacchi, C. J., Collatz, G. J. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 98-112 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Photosynthesis
  • photosynthesis
  • canopy
  • mechanistic models
  • Crop Production

• Molecular and structural perspectives on cytochrome P450s in plants

  Schuler, M. A. & Rupasinghe, S. G., 2011, Advances in Botanical Research. Academic Press Inc., p. 263-307 45 p. (Advances in Botanical Research; vol. 60).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • cytochromes
  • carbon
  • biopharmaceuticals
  • decarboxylation
  • phylogeny

• Molecular genetic mapping of papaya

  Han, J. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 143-155 13 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Molecular mechanisms of metabolic resistance to synthetic and natural xenobiotics

  Li, X., Schuler, M. A. & Berenbaum, M. R., Jan 26 2007, Annual Review of Entomology. Berenbaum, Carde & Robinson (eds.). p. 231-253 23 p. (Annual Review of Entomology; vol. 52).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • xenobiotics
  • insecticide
  • allelochemical
  • gene
  • allelochemicals

• Movies, Insects in-Chapter 174

  Berenbaum, M. R. & Leskosky, R. J., Dec 1 2009, Encyclopedia of Insects. Elsevier Inc., p. 668-674 7 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Motion Pictures
  • Insecta
  • insects
  • televisions (equipment)
  • Arthropods

• Nanodiscs as a new tool to examine lipid-protein interactions

  Schuler, M. A., Denisov, I. G. & Sligar, S. G., 2013, Lipid-Protein Interactions: Methods and Protocols. Humana Press Inc., p. 415-433 19 p. (Methods in Molecular Biology; vol. 974).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Lipids
  • Membrane Proteins
  • Lipid Bilayers
  • Proteins
  • Membranes

• Nanodiscs as a New Tool to Examine Lipid–Protein Interactions

  Denisov, I. G., Schuler, M. A. & Sligar, S. G., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 645-671 27 p. (Methods in Molecular Biology; vol. 2003).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Lipids
  • Lipoproteins
  • Proteins
  • Membranes
  • Protein Transport

• Northwestern North America

  Gavin, D. G. & Hu, F. S., Jan 1 2013, Encyclopedia of Quaternary Science: Second Edition. Elsevier Inc., p. 124-132 9 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • North America
  • vegetation
  • Cordilleran Ice Sheet
  • Holocene
  • rain forest

• Optical methods for investigation of leaf photosynthesis

  Ducruet, J. M., Baron, M., Delucia, E. H., Morales, F. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 131-151 21 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Photosynthesis
  • photosynthesis
  • Light
  • Fluorescence
  • Energy Metabolism

• P450s in plants, insects, and their fungal pathogens

  Schuler, M. A., Jan 1 2015, Cytochrome P450: Structure, Mechanism, and Biochemistry, Fourth Edition. Springer International Publishing, p. 409-449 41 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Pathogens
  • Insecta
  • Genes
  • Mixed Function Oxygenases
  • Biosynthetic Pathways

• Papaya genome and genomics

  Ming, R., Yu, Q. & Moore, P. H., Nov 1 2012, Genomics of Tree Crops. Springer New York, Vol. 9781461409205. p. 241-259 19 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Carica
  • papayas
  • Genomics
  • Genome
  • genomics

• Papaya sex chromosomes

  Gschwend, A. R. & Ming, R., Feb 1 2012, New Insights on Plant Sex Chromosomes. Nova Science Publishers, Inc., p. 51-66 16 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Carica
  • Sex Chromosomes
  • papayas
  • sex chromosomes
  • X Chromosome

• Photosynthetic Light Capture and Processing from Cell to Canopy

  Stenberg, P., DeLucia, E. H., Schoettle, A. W. & Smolander, H., Jan 1 1995, Resource Physiology of Conifers: Acquisition, Allocation, and Utilization. Elsevier Inc., p. 3-38 36 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Photosynthetic responses to biotic stress

  Barón, M., Flexas, J. & Delucia, E. H., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 331-350 20 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Photosynthesis
  • biotic stress
  • photosynthesis
  • Daktulosphaira vitifoliae
  • leaf area

• Photosynthetic responses to high temperature

  Sharkey, T. D. & Bernacchi, C. J., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 290-298 9 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Temperature
  • Photosynthesis
  • temperature
  • photosynthesis
  • Droughts

• Photosynthetic responses to increased co₂ and air pollutants

  Calfapietra, C., Bernacchi, C. J., Centritto, M. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 257-271 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Air Pollutants
  • air pollutants
  • Forests
  • climate change
  • Atmosphere

• Physical mapping of papaya sex chromosomes

  Wang, J., Na, J. K. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 329-340 12 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Pioneer species

  Dalling, J. W., Jan 1 2018, Encyclopedia of Ecology. Elsevier, p. 181-184 4 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • pioneer species
  • secondary succession
  • primary succession
  • life history
  • habitat

• Pioneer Species

  Dalling, J. W., Jan 1 2008, Encyclopedia of Ecology, Five-Volume Set. Elsevier Inc., p. 2779-2782 4 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • secondary succession
  • pioneer species
  • Ecosystem
  • Soil
  • primary succession

• Plants in changing environmental conditions of the anthropocene

  Leakey, A. D. B., Jan 1 2014, Ecology and the Environment. Springer New York, p. 533-572 40 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Productivity
  • environmental factors
  • Ecosystems
  • Greenhouse Gases
  • Drought

• Postingestive Effects of Phytochemicals On Insects: On Paracelsus and Plant Products

  Berenbaum, M., 1986, Insect-Plant Interactions. Miller, J. R. & Miller, T. A. (eds.). New York: Springer-Verlag, p. 121-153 (Springer Series in Experimental Entomology).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • plant products
  • chemical constituents of plants
  • insects
  • plant biochemistry
  • phytophagous insects

• Sequencing and assembly of the transgenic papaya genome

  VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 187-203 17 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Sisal/agave

  Davis, S. C. & Long, S. P., Jan 1 2015, Industrial Crops: Breeding for Bioenergy and Bioproducts. Springer New York, p. 335-349 15 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Agave
  • sisal
  • Biofuels
  • feedstocks
  • biofuels

• Splice site requirements and switches in plants

  Schuler, M. A., Dec 1 2008, Human Cytomegalovirus. Reddy, A. & Golovkin, M. (eds.). p. 39-59 21 p. (Current Topics in Microbiology and Immunology; vol. 326).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Introns
  • RNA Splice Sites
  • Consensus Sequence
  • U12 small nuclear RNA
  • RNA Precursors

• Structural genomics and genome sequencing

  Paterson, A. H., Souza, G., Van Sluys, M. A., Ming, R. R. & D’Hont, A., Jan 1 2010, Genetics, Genomics and Breeding of Sugarcane. CRC Press, p. 149-165 17 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Saccharum
  • structural genomics
  • Genomics
  • sugarcane
  • Genes

• The bench scientist’s guide to statistical analysis of RNA-seq data

  Yendrek, C. R., Ainsworth, E. A. & Thimmapuram, J., Jan 1 2014, Bioinformatics: The Impact of Accurate Quantification on Proteomic and Genetic Analysis and Research. Apple Academic Press, p. 1-20 20 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Statistical Analysis
  • Statistical methods
  • Messenger RNA
  • RNA
  • Reproducibility

• "The birds and the bees"-how pollinators help maintain healthy ecosystems

  Berenbaum, M. R., Jan 1 2009, Honey Bees: Colony Collapse Disorder and Pollinator Role in Ecosystems. Nova Science Publishers, Inc., p. 189-195 7 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter