Research Output

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2019

Nanodiscs as a New Tool to Examine Lipid–Protein Interactions

Denisov, I. G., Schuler, M. A. & Sligar, S. G., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 645-671 27 p. (Methods in Molecular Biology; vol. 2003).

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

Big data in agriculture and their analyses

Shrivastava, S. & Marshall-Colon, A., Jan 1 2018, Encyclopedia of Food Security and Sustainability. Elsevier, p. 233-237 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Fossil pollen and spores in paleoecology

Mander, L. & Punyasena, S. W., Jan 1 2018, Vertebrate Paleobiology and Paleoanthropology. Springer, p. 215-234 20 p. (Vertebrate Paleobiology and Paleoanthropology).

Research output: Chapter in Book/Report/Conference proceedingChapter

Pioneer species

Dalling, J. W., Jan 1 2018, Encyclopedia of Ecology. Elsevier, p. 181-184 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2015

P450s in plants, insects, and their fungal pathogens

Schuler, M. A., Jan 1 2015, Cytochrome P450: Structure, Mechanism, and Biochemistry, Fourth Edition. Springer International Publishing, p. 409-449 41 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Sisal/agave

Davis, S. C. & Long, S. P., Jan 1 2015, Industrial Crops: Breeding for Bioenergy and Bioproducts. Springer New York, p. 335-349 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2014

Cloning major genes controlling fruit flesh color in papaya

Aryal, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 341-353 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomics of papaya sex chromosomes

VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 309-326 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Insights into the Common Ancestor of Eudicots

Li, J., Tang, H., Bowers, J. E., Ming, R. & Paterson, A. H., 2014, Advances in Botanical Research. Academic Press Inc., p. 137-174 38 p. (Advances in Botanical Research; vol. 69).

Research output: Chapter in Book/Report/Conference proceedingChapter

Late-Quaternary Environmental and Ecological History of the Arctic Foothills, Northern Alaska

Wyatt Oswald, W., Brubaker, L. B., Hu, F. S. & Kling, G. W., Mar 27 2014, Alaska's Changing Arctic: Ecological Consequences for Tundra, Streams, and Lakes. Oxford University Press

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular genetic mapping of papaya

Han, J. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 143-155 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Physical mapping of papaya sex chromosomes

Wang, J., Na, J. K. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 329-340 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Plants in changing environmental conditions of the anthropocene

Leakey, A. D. B., Jan 1 2014, Ecology and the Environment. Springer New York, p. 533-572 40 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Sequencing and assembly of the transgenic papaya genome

VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 187-203 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Simulating labeling to estimate kinetic parameters for flux control analysis

Marshall-Colon, A., Sengupta, N., Rhodes, D. & Morgan, J. A., 2014, Plant Metabolic Flux Analysis: Methods and Protocols. Humana Press Inc., p. 211-222 12 p. (Methods in Molecular Biology; vol. 1090).

Research output: Chapter in Book/Report/Conference proceedingChapter

The bench scientist’s guide to statistical analysis of RNA-seq data

Yendrek, C. R., Ainsworth, E. A. & Thimmapuram, J., Jan 1 2014, Bioinformatics: The Impact of Accurate Quantification on Proteomic and Genetic Analysis and Research. Apple Academic Press, p. 1-20 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2013

Neutral Theory and Beyond

O'Dwyer, J. & Chisholm, R., Jan 1 2013, Encyclopedia of Biodiversity: Second Edition. Elsevier Inc., p. 510-518 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Northwestern North America

Gavin, D. G. & Hu, F. S., Jan 1 2013, Encyclopedia of Quaternary Science: Second Edition. Elsevier Inc., p. 124-132 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2012

Papaya genome and genomics

Ming, R., Yu, Q. & Moore, P. H., Nov 1 2012, Genomics of Tree Crops. Springer New York, Vol. 9781461409205. p. 241-259 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Papaya sex chromosomes

Gschwend, A. R. & Ming, R., Feb 1 2012, New Insights on Plant Sex Chromosomes. Nova Science Publishers, Inc., p. 51-66 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2011

Crop photosynthesis

Earl, H., Bernacchi, C. J. & Medrano, H., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 506-520 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Gas-exchange analysis: Basics and problems

Bernacchi, C., Diaz-Espejo, A. & Flexas, J., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 115-130 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Global change and photosynthesis

Bernacchi, C. J., Calfapietra, C., Centritto, M. & Valladares, F., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 537-545 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Measurement of chloroplast ATP synthesis activity in Arabidopsis

Grennan, A. K. & Ort, D. R., Oct 24 2011, Chloroplast Research in Arabidopsis: Methods and Protocols, Volume II. Vol. 775. p. 343-355 13 p. (Methods in Molecular Biology; vol. 775).

Research output: Chapter in Book/Report/Conference proceedingChapter

Models of photosynthesis

Diaz-Espejo, A., Bernacchi, C. J., Collatz, G. J. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 98-112 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular and structural perspectives on cytochrome P450s in plants

Schuler, M. A. & Rupasinghe, S. G., 2011, Advances in Botanical Research. Academic Press Inc., p. 263-307 45 p. (Advances in Botanical Research; vol. 60).

Research output: Chapter in Book/Report/Conference proceedingChapter

Optical methods for investigation of leaf photosynthesis

Ducruet, J. M., Baron, M., Delucia, E. H., Morales, F. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 131-151 21 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Photosynthetic responses to biotic stress

Barón, M., Flexas, J. & Delucia, E. H., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 331-350 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Photosynthetic responses to high temperature

Sharkey, T. D. & Bernacchi, C. J., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 290-298 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Photosynthetic responses to increased co2 and air pollutants

Calfapietra, C., Bernacchi, C. J., Centritto, M. & Sharkey, T. D., Jan 1 2011, Terrestrial Photosynthesis in a Changing Environment a Molecular, Physiological and Ecological Approach. Cambridge University Press, p. 257-271 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2010

Advances in Coffea Genomics

Kochko, A. D., Campa, C., Guyot, R., Hamon, P., Poncet, V., Tranchant-Dubreuil, C., Hamon, S., Akaffou, S., Andrade, A. C., Crouzillat, D., Ming, R. & Mueller, L. A., Jan 1 2010, Advances in Botanical Research. C ed. p. 23-63 41 p. (Advances in Botanical Research; vol. 53, no. C).

Research output: Chapter in Book/Report/Conference proceedingChapter

Direct Effects of Rising Atmospheric Carbon Dioxide and Ozone on Crop Yields

Ainsworth, E. A. & McGrath, J. M., Jan 1 2010, Advances in Global Change Research. Springer International Publishing, p. 109-130 22 p. (Advances in Global Change Research; vol. 37).

Research output: Chapter in Book/Report/Conference proceedingChapter

Efforts to deregulate Rainbow papaya in Japan: Molecular characterization of transgene and vector inserts

Suzuki, J. Y., Tripathi, S., Fermín, G. A., Jan, F. J., Hou, S., Saw, J. H., Ackerman, C. M., Yu, Q., Schatz, M. C., Pitz, K. Y., Yépes, M., Fitch, M. M. M., Manshardt, R. M., Slightom, J. L., Ferreira, S. A., Salzberg, S. L., Alam, M., Ming, R., Moore, P. H. & Gonsalves, D., Jan 31 2010, Acta Horticulturae. International Society for Horticultural Science, p. 235-240 6 p. (Acta Horticulturae; vol. 851).

Research output: Chapter in Book/Report/Conference proceedingChapter

Miscanthus. A Promising Biomass Crop

Heaton, E. A., Dohleman, F. G., Miguez, A. F., Juvik, J. A., Lozovaya, V., Widholm, J., Zabotina, O. A., McIsaac, G. F., David, M. B., Voigt, T. B., Boersma, N. N. & Long, S. P., 2010, Advances in Botanical Research. C ed. Academic Press Inc., p. 75-137 63 p. (Advances in Botanical Research; vol. 56, no. C).

Research output: Chapter in Book/Report/Conference proceedingChapter

Structural genomics and genome sequencing

Paterson, A. H., Souza, G., Van Sluys, M. A., Ming, R. R. & D’Hont, A., Jan 1 2010, Genetics, Genomics and Breeding of Sugarcane. CRC Press, p. 149-165 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2009

Insect Biodiversity - Millions and Millions

Berenbaum, M. R., Mar 30 2009, Insect Biodiversity: Science and Society. John Wiley and Sons, p. 575-582 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Movies, Insects in-Chapter 174

Berenbaum, M. R. & Leskosky, R. J., Dec 1 2009, Encyclopedia of Insects. Elsevier Inc., p. 668-674 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

"The birds and the bees"-how pollinators help maintain healthy ecosystems

Berenbaum, M. R., Jan 1 2009, Honey Bees: Colony Collapse Disorder and Pollinator Role in Ecosystems. Nova Science Publishers, Inc., p. 189-195 7 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2008

Anthropogenic disturbance in tropical forests: Toward a functional understanding of seedling responses

Dalling, J. W. & Burslem, D. F. R. P., Jan 1 2008, Seedling Ecology and Evolution. Cambridge University Press, p. 332-351 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Chemical Mediation of Host-Plant Specialization: The Papilionid Paradigm

Berenbaum, M. R. & Feeny, P. P., Jan 3 2008, Specialization, Speciation, and Radiation: The Evolutionary Biology of Herbivorous Insects. Tilmon, K. (ed.). University of California Press, p. 3-19 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Coffee germplasm resources, genomics, and breeding

Vega, F. E., Ebert, A. W. & Ming, R., Jan 1 2008, Plant Breeding Reviews. John Wiley and Sons Inc., Vol. 30. p. 415-447 33 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Functional Analysis and Phosphorylation Site Mapping of Leucine-Rich Repeat Receptor-Like Kinases

Clouse, S. D., Goshe, M. B., Huber, S. C. & Li, J., Jan 7 2008, Plant Proteomics: Technologies, Strategies, and Applications. John Wiley & Sons, Inc., p. 469-483 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pioneer Species

Dalling, J. W., Jan 1 2008, Encyclopedia of Ecology, Five-Volume Set. Elsevier Inc., p. 2779-2782 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Splice site requirements and switches in plants

Schuler, M. A., Dec 1 2008, Human Cytomegalovirus. Reddy, A. & Golovkin, M. (eds.). p. 39-59 21 p. (Current Topics in Microbiology and Immunology; vol. 326).

Research output: Chapter in Book/Report/Conference proceedingChapter

2007

Molecular mechanisms of metabolic resistance to synthetic and natural xenobiotics

Li, X., Schuler, M. A. & Berenbaum, M. R., Jan 26 2007, Annual Review of Entomology. Berenbaum, Carde & Robinson (eds.). p. 231-253 23 p. (Annual Review of Entomology; vol. 52).

Research output: Chapter in Book/Report/Conference proceedingChapter

The influence of seed source, Habitat and fungi on cecropia seed survival in two neotropical forests

Gallery, R. E., Dalling, J. W., Wolfe, B. T. & Arnold, A. E., Aug 30 2007, Seed Dispersal: Theory and its Application in a Changing World. CABI Publishing, p. 479-498 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2005

Celluloid entomology

Berenbaum, M. R. & Leskosky, R. J., Dec 1 2005, Entomology at the Land Grant University: Perspectives from the Texas A&M University Department Centenary. Texas A&M University Press, p. 195-206 12 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

The changing role of forests in the global carbon cycle: Responding to elevated carbon dioxide in the atmosphere

Delucia, E. H., Moore, D. J., Hamilton, J. G., Thomas, R. B., Springer, C. J. & Norby, R. J., Jan 1 2005, Climate Change and Global Food Security. CRC Press, p. 187-222 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2000

Carbon and nitrogen metabolism and reversible protein phosphorylation

Toroser, D. & Huber, S. C., Jan 1 2000, Advances in Botanical Research. Academic Press Inc., p. 435-458 24 p. (Advances in Botanical Research; vol. 32).

Research output: Chapter in Book/Report/Conference proceedingChapter

1995

Photosynthetic Light Capture and Processing from Cell to Canopy

Stenberg, P., DeLucia, E. H., Schoettle, A. W. & Smolander, H., Jan 1 1995, Resource Physiology of Conifers: Acquisition, Allocation, and Utilization. Elsevier Inc., p. 3-38 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter