Research Output 1975 2020

2015

Biophysical impacts of climate-smart agriculture in the Midwest United States

Bagley, J. E., Miller, J. & Bernacchi, C. J., Sep 1 2015, In : Plant, Cell and Environment. 38, 9, p. 1913-1930 18 p.

Research output: Contribution to journalReview article

Midwestern United States
Agriculture
Climate
agriculture
climate

Canopy warming caused photosynthetic acclimation and reduced seed yield in maize grown at ambient and elevated [CO2]

Ruiz-Vera, U. M., Siebers, M. H., Drag, D. W., Ort, D. R. & Bernacchi, C. J., Nov 2015, In : Global change biology. 21, 11, p. 4237-4249 13 p.

Research output: Contribution to journalArticle

acclimation
Seed
Biomass
warming
maize

Can the exceptional chilling tolerance of C4 photosynthesis found in Miscanthus ;× giganteus be exceeded? Screening of a novel Miscanthus Japanese germplasm collection

Głowacka, K., Jørgensen, U., Kjeldsen, J. B., Kørup, K., Spitz, I., Sacks, E. J. & Long, S. P., May 1 2015, In : Annals of Botany. 115, 6, p. 981-990 10 p.

Research output: Contribution to journalArticle

C4 photosynthesis
Miscanthus
germplasm conservation
cold tolerance
screening

Changing the spatial pattern of TFL1 expression reveals its key role in the shoot meristem in controlling Arabidopsis flowering architecture

Baumann, K., Venail, J., Berbel, A., Domenech, M. J., Money, T., Conti, L., Hanzawa, Y., Madueno, F. & Bradley, D., Aug 1 2015, In : Journal of experimental botany. 66, 15, p. 4769-4780 12 p.

Research output: Contribution to journalArticle

Meristem
shoot meristems
Arabidopsis
meristems
flowering

Characterization of quinone outside inhibitor fungicide resistance in Cercospora sojina and development of diagnostic tools for its identification

Zeng, F., Arnao, E., Zhang, G., Olaya, G., Wullschleger, J., Sierotzki, H., Ming, R. R., Bluhm, B. H., Bond, J. P., Fakhoury, A. M. & Bradley, C., Jan 1 2015, In : Plant disease. 99, 4, p. 544-550 7 p.

Research output: Contribution to journalArticle

Cercospora sojina
fungicide resistance
quinones
cytochrome b
frogeye leaf spot

Charcoal reflectance reveals early Holocene boreal deciduous forests burned at high intensities

Hudspith, V. A., Belcher, C. M., Kelly, R. & Hu, F. S., Apr 8 2015, In : PloS one. 10, 4, e0120835.

Research output: Contribution to journalArticle

Charcoal
charcoal
deciduous forests
boreal forests
reflectance

Cheaters must prosper: Reconciling theoretical and empirical perspectives on cheating in mutualism

Jones, E. I., Afkhami, M. E., Akçay, E., Bronstein, J. L., Bshary, R., Frederickson, M. E., Heath, K. D., Hoeksema, J. D., Ness, J. H., Pankey, M. S., Porter, S. S., Sachs, J. L., Scharnagl, K. & Friesen, M. L., Nov 2015, In : Ecology Letters. 18, 11, p. 1270-1284 15 p.

Research output: Contribution to journalReview article

mutualism
fitness
researchers
experiment
methodology
Agricultural Crops
Forestry
Climate Change
Genetically Modified Plants
Agriculture

Colin A. Wraight: November 27, 1945–July 10, 2014

Govindjee, Prince, R. C. & Ort, D. R., Sep 27 2015, In : Photosynthetica. 53, 3, p. 478-480 3 p.

Research output: Contribution to journalArticle

Contribution of clinically derived mutations in ERG11 to azole resistance in Candida albicans

Flowers, S. A., Colón, B., Whaley, S. G., Schuler, M. A. & David Rogers, P., Jan 1 2015, In : Antimicrobial Agents and Chemotherapy. 59, 1, p. 450-460 11 p.

Research output: Contribution to journalArticle

Azoles
Amino Acid Substitution
Candida albicans
Fluconazole
Mutation

Cost of abating greenhouse gas emissions with cellulosic ethanol

Dwivedi, P., Wang, W., Hudiburg, T., Jaiswal, D., Parton, W., Long, S., Delucia, E. & Khanna, M., Feb 17 2015, In : Environmental Science and Technology. 49, 4, p. 2512-2522 11 p.

Research output: Contribution to journalArticle

Cellulosic ethanol
Gas emissions
Greenhouse gases
ethanol
greenhouse gas

De novo transcriptome sequence and identification of major bast-related genes involved in cellulose biosynthesis in jute (Corchorus capsularis L.)

Zhang, L., Ming, R., Zhang, J., Tao, A., Fang, P. & Qi, J., Dec 15 2015, In : BMC genomics. 16, 1, 1062.

Research output: Contribution to journalArticle

Corchorus
Transcriptome
Cellulose
Genes
Single Nucleotide Polymorphism
aquaporins
water management
soybean
fluid mechanics
soybeans

Do soil microbes and abrasion by soil particles influence persistence and loss of physical dormancy in seeds of tropical Pioneers?

Zalamea, P. C., Sarmiento, C., Elizabeth Arnold, A., Davis, A. S. & Dalling, J. W., Jan 13 2015, In : Frontiers in Plant Science. 5, JAN, 799.

Research output: Contribution to journalArticle

seed dormancy
soil microorganisms
seeds
soil
dormancy

Edible Non-crustacean Arthropods in Rural Communities of Madagascar

Randrianandrasana, M. & Berenbaum, M. R., Jul 1 2015, In : Journal of Ethnobiology. 35, 2, p. 354-383 30 p.

Research output: Contribution to journalArticle

Madagascar
rural communities
rural community
arthropods
food

Effect of Piperonyl Butoxide on the Toxicity of Four Classes of Insecticides to Navel Orangeworm (Amyelois transitella) (Lepidoptera: Pyralidae)

Demkovich, M., Dana, C. E., Siegel, J. P. & Berenbaum, M. R., Dec 1 2015, In : Journal of economic entomology. 108, 6, p. 2753-2760 8 p.

Research output: Contribution to journalArticle

Amyelois transitella
Piperonyl Butoxide
piperonyl butoxide
Lepidoptera
Pyralidae

Environment Has Little Effect on Biomass Biochemical Composition of Miscanthus × giganteus Across Soil Types, Nitrogen Fertilization, and Times of Harvest

Arundale, R. A., Bauer, S., Haffner, F. B., Mitchell, V. D., Voigt, T. B. & Long, S. P., Dec 1 2015, In : Bioenergy Research. 8, 4, p. 1636-1646 11 p.

Research output: Contribution to journalArticle

Miscanthus giganteus
feedstocks
hemicellulose
soil types
lignin

Functional analysis of the BRI1 receptor kinase by Thr-for-Ser substitution in a regulatory autophosphorylation site

Oh, M. H., Bender, K. W., Kim, S. Y., Wu, X., Lee, S., Nou, I. S., Zielinski, R. E., Clouse, S. D. & Huber, S. C., Jul 30 2015, In : Frontiers in Plant Science. 6, JULY, 562.

Research output: Contribution to journalArticle

protein phosphorylation
phosphotransferases (kinases)
receptors
brassinosteroids
phosphorylation

Genetic diversity and structure of the noxious alien grass Praxelis clematidea in southern China

Wang, Q., Huang, M., Downie, S. R., Chen, Z. & Chen, Y., Apr 1 2015, In : Biochemical Systematics and Ecology. 59, p. 183-189 7 p.

Research output: Contribution to journalArticle

Genetic Structures
Poaceae
Microsatellite Repeats
genetic structure
genetic variation

Glutaredoxin AtGRXC2 catalyses inhibitory glutathionylation of arabidopsis BRI1-associated receptor-like kinase 1 (BAK1) in vitro

Bender, K. W., Wang, X., Cheng, G. B., Kim, H. S., Zielinski, R. E. & Huber, S. C., May 1 2015, In : Biochemical Journal. 467, 3, p. 399-413 15 p.

Research output: Contribution to journalArticle

Glutaredoxins
Arabidopsis
Phosphotransferases
Glutathione Disulfide
Proteins

Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis

Toomey, M., Friedl, M. A., Frolking, S., Hufkens, K., Klosterman, S., Sonnentag, O., Baldocchi, D. D., Bernacchi, C. J., Biraud, S. C., Bohrer, G., Brzostek, E., Burns, S. P., Coursolle, C., Hollinger, D. Y., Margolis, H. A., McCaughey, H., Monson, R. K., Munger, J. W., Pallardy, S., Phillips, R. P. & 4 others, Torn, M. S., Wharton, S., Zeri, M. & Richardson, A. D., Jan 1 2015, In : Ecological Applications. 25, 1, p. 99-115 17 p.

Research output: Contribution to journalArticle

photosynthesis
deciduous forest
canopy
evergreen forest
grassland

Heat waves imposed during early pod development in soybean (Glycine max) cause significant yield loss despite a rapid recovery from oxidative stress

Siebers, M. H., Yendrek, C. R., Drag, D., Locke, A. M., Rios Acosta, L., Leakey, A. D. B., Ainsworth, E. A., Bernacchi, C. J. & Ort, D. R., Aug 1 2015, In : Global change biology. 21, 8, p. 3114-3125 12 p.

Research output: Contribution to journalArticle

Oxidative stress
Glycine
soybean
Recovery
Photosynthesis

High potential for iron reduction in upland soils

Yang, W. H., Liptzin, D. & Yavitt, J. B., Jul 1 2015, In : Ecology. 96, 7, p. 2015-2020 6 p.

Research output: Contribution to journalArticle

upland soils
annual grasslands
iron
peatlands
tropical forests

Hit-and-Run leaves its mark: Catalyst transcription factors and chromatin modification

Varala, K., Li, Y., Marshall-Colón, A., Para, A. & Coruzzi, G. M., Aug 1 2015, In : BioEssays. 37, 8, p. 851-856 6 p.

Research output: Contribution to journalArticle

Chromatin
Transcription Factors
Catalysts
Genes
Transcription

Identical substitutions in nagnesium chelatase paralogs result in chlorophyll-deficient soybean mutants

Campbell, B. W., Mani, D., Curtin, S. J., Slattery, R. A., Michno, J. M., Ort, D. R., Schaus, P. J., Palmer, R. G., Orf, J. H. & Stupar, R. M., Jan 1 2015, In : G3: Genes, Genomes, Genetics. 5, 1, p. 123-131 9 p.

Research output: Contribution to journalArticle

Chlorophyll
Soybeans
Chromosomes, Human, Pair 13
Exons
Mutation

Impacts of elevated atmospheric CO2 on nutrient content of important food crops

Dietterich, L. H., Zanobetti, A., Kloog, I., Huybers, P., Leakey, A. D. B., Bloom, A. J., Carlisle, E., Fernando, N., Fitzgerald, G., Hasegawa, T., Holbrook, N. M., Nelson, R. L., Norton, R., Ottman, M. J., Raboy, V., Sakai, H., Sartor, K. A., Schwartz, J., Seneweera, S., Usui, Y. & 2 others, Yoshinaga, S. & Myers, S. S., Jul 21 2015, In : Scientific Data. 2, 150036.

Research output: Contribution to journalArticle

Nutrients
Crops
food
air
Nutrition
gas exchange
Gases
Photosynthesis
Soybeans
Artifacts
Bradyrhizobium
Bradyrhizobium japonicum
Soybeans
Glycine max
carbon dioxide

Is there potential to adapt soybean (Glycine max Merr.) to future [CO2]? An analysis of the yield response of 18 genotypes in free-air CO2 enrichment

Bishop, K. A., Betzelberger, A. M., Long, S. P. & Ainsworth, E., Sep 1 2015, In : Plant, Cell and Environment. 38, 9, p. 1765-1774 10 p.

Research output: Contribution to journalArticle

Soybeans
Glycine max
carbon dioxide
Air
Genotype

Late-Holocene climate variability and ecosystem responses in Alaska inferred from high-resolution multiproxy sediment analyses at Grizzly Lake

Tinner, W., Beer, R., Bigler, C., Clegg, B. F., Jones, R. T., Kaltenrieder, P., van Raden, U. J., Gilli, A. & Hu, F. S., Oct 15 2015, In : Quaternary Science Reviews. 126, p. 41-56 16 p.

Research output: Contribution to journalArticle

ecosystem response
Picea glauca
Picea mariana
diatom
Holocene

Long-term nitrogen addition causes the evolution of less-cooperative mutualists

Weese, D. J., Heath, K. D., Dentinger, B. T. M. & Lau, J. A., Mar 1 2015, In : Evolution. 69, 3, p. 631-642 12 p.

Research output: Contribution to journalArticle

Rhizobium
rhizobacterium
cooperatives
Nitrogen
Symbiosis

Mechanism of resistance acquisition and potential associated fitness costs in Amyelois transitella (Lepidoptera: Pyralidae) exposed to pyrethroid insecticides

Demkovich, M., Siegel, J. P., Higbee, B. S. & Berenbaum, M. R., Jun 1 2015, In : Environmental entomology. 44, 3, p. 855-863 9 p.

Research output: Contribution to journalArticle

Amyelois transitella
bifenthrin
pyrethroid insecticides
pyrethroid
nut

Meeting the global food demand of the future by engineering crop photosynthesis and yield potential

Long, S. P., Marshall-Colon, A. & Zhu, X. G., Mar 26 2015, In : Cell. 161, 1, p. 56-66 11 p., 8102.

Research output: Contribution to journalReview article

Genetic Engineering
Photosynthesis
Computer Simulation
Crops
Food

Microbially mediated nitrogen retention and loss in a salt marsh soil http://www.esajournals.org/doi/pdf/10.1890/ES14-00179.1

Yang, W. H., Traut, B. H. & Silver, W. L., Jan 1 2015, In : Ecosphere. 6, 1, 7.

Research output: Contribution to journalArticle

salt marsh soils
monoculture
saltmarsh
plant communities
mineralization

Molecular phylogeography and ecological niche modelling of a widespread herbaceous climber, Tetrastigma hemsleyanum (Vitaceae): Insights into Plio-Pleistocene range dynamics of evergreen forest in subtropical China

Wang, Y. H., Jiang, W. M., Comes, H. P., Hu, F. S., Qiu, Y. X. & Fu, C. X., Apr 1 2015, In : New Phytologist. 206, 2, p. 852-867 16 p.

Research output: Contribution to journalArticle

Vitaceae
Tetrastigma
Phylogeography
phylogeography
China

Origin and domestication of papaya Yh chromosome

VanBuren, R., Zeng, F., Chen, C., Zhang, J., Wai, C. M., Han, J., Aryal, R., Gschwend, A. R., Wang, J., Na, J. K., Huang, L., Zhang, L., Miao, W., Gou, J., Arro, J., Guyot, R., Moore, R. C., Wang, M. L., Zee, F., Charlesworth, D. & 3 others, Moore, P. H., Yu, Q. & Ming, R., Apr 1 2015, In : Genome Research. 25, 4, p. 524-533 10 p.

Research output: Contribution to journalArticle

Carica
Chromosomes
Haplotypes
Mutation
Civilization

P450s in plants, insects, and their fungal pathogens

Schuler, M. A., Jan 1 2015, Cytochrome P450: Structure, Mechanism, and Biochemistry, Fourth Edition. Springer International Publishing, p. 409-449 41 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pathogens
Insects
Genes
Mixed Function Oxygenases
Biosynthetic Pathways

Patterns of Genetic Diversity in the Globally Invasive Species Wild Parsnip (Pastinaca sativa)

Jogesh, T., Peery, R., Downie, S. R. & Berenbaum, M. R., Oct 1 2015, In : Invasive Plant Science and Management. 8, 4, p. 415-429 15 p.

Research output: Contribution to journalArticle

Pastinaca sativa
parsnips
invasive species
genetic variation
haplotypes

Pharaoh's Dream Revisited: An Integrated US Midwest Field Research Network for Climate Adaptation

Gustafson, D., Hayes, M., Janssen, E., Lobell, D. B., Long, S., Nelson, G. C., Pakrasi, H. B., Raven, P., Robertson, G. P., Robertson, R. & Wuebbles, D., Dec 30 2015, In : BioScience. 66, 1, p. 80-85 6 p.

Research output: Contribution to journalArticle

Midwestern United States
Climate
climate
Metagenomics
environmental economics

Photosynthetic energy conversion efficiency: Setting a baseline for gauging future improvements in important food and biofuel crops

Slattery, R. A. & Ort, D. R., Jan 1 2015, In : Plant physiology. 168, 2, p. 383-392 10 p.

Research output: Contribution to journalArticle

energy conversion
Biofuels
energy crops
food crops
Radiation

Photosynthetic terpene hydrocarbon production for fuels and chemicals

Wang, X., Ort, D. R. & Yuan, J. S., Feb 1 2015, In : Plant Biotechnology Journal. 13, 2, p. 137-146 10 p.

Research output: Contribution to journalReview article

fuel production
Terpenes
Hydrocarbons
terpenoids
hydrocarbons

Progress towards establishing collection standards for semi-automated pollen classification in forensic geo-historical location applications

Riley, K. C., Woodard, J. P., Hwang, G. M. & Punyasena, S. W., Oct 1 2015, In : Review of Palaeobotany and Palynology. 221, p. 117-127 11 p.

Research output: Contribution to journalArticle

pollen
fossils
metadata
artificial intelligence
computer vision

Redesigning photosynthesis to sustainably meet global food and bioenergy demand

Ort, D. R., Merchant, S. S., Alric, J., Barkan, A., Blankenship, R. E., Bock, R., Croce, R., Hanson, M. R., Hibberd, J. M., Long, S. P., Moore, T. A., Moroney, J., Niyogi, K. K., Parry, M. A. J., Peralta-Yahya, P. P., Prince, R. C., Redding, K. E., Spalding, M. H., Van Wijk, K. J., Vermaas, W. F. J. & 5 others, Von Caemmerer, S., Weber, A. P. M., Yeates, T. O., Yuan, J. S. & Zhu, X. G., Jul 14 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 28, p. 8529-8536 8 p.

Research output: Contribution to journalReview article

Photosynthesis
Synthetic Biology
Food
Biofuels
Population Growth

Road Worrier

Berenbaum, M. R., Mar 1 2015, In : American Entomologist. 61, 1, p. 5-8 4 p.

Research output: Contribution to journalArticle

roads
road

Short-termfertilizer application alters phenotypic traits of symbiotic nitrogen fixing bacteria

Simonsen, A. K., Han, S., Rekret, P., Rentschler, C. S., Heath, K. D. & Stinchcombe, J. R., Jan 1 2015, In : PeerJ. 2015, 10, e1291.

Research output: Contribution to journalArticle

nitrogen-fixing bacteria
Fertilizers
Rhizobium
Bacteria
Nitrogen

Sisal/agave

Davis, S. C. & Long, S. P., Jan 1 2015, Industrial Crops: Breeding for Bioenergy and Bioproducts. Springer New York, p. 335-349 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Agave
sisal
feedstocks
Biofuels
biofuels

Spatiotemporal patterns of tundra fires: Late-Quaternary charcoal records from Alaska

Chipman, M. L., Hudspith, V., Higuera, P. E., Duffy, P. A., Kelly, R., Oswald, W. W. & Hu, F. S., Jul 3 2015, In : Biogeosciences. 12, 13, p. 4017-4027 11 p.

Research output: Contribution to journalArticle

tundra
charcoal
lakes
ecosystems
ecosystem

Task-related differential expression of four cytochrome P450 genes in honeybee appendages

Mao, W., Schuler, M. A. & Berenbaum, M. R., Oct 1 2015, In : Insect Molecular Biology. 24, 5, p. 582-588 7 p.

Research output: Contribution to journalArticle

appendages
cytochrome P-450
Cytochrome P-450 Enzyme System
honey bees
Leg

Terrestrial ecosystems in a changing environment: A dominant role for water

Bernacchi, C. J. & Vanloocke, A., Apr 29 2015, In : Annual Review of Plant Biology. 66, p. 599-622 24 p.

Research output: Contribution to journalArticle

Ecosystem
Water Cycle
Water
transpiration
ecosystems