Research Output 1975 2020

Seasonal changes in weight of above- and below-ground vegetation and dead plant material in a salt marsh at Colne Point, Essex.

Hussey, A. & Long, S. P., Jan 1 1982, In : Journal of Ecology. 70, 3, p. 757-771 15 p.

Research output: Contribution to journalArticle

ground vegetation
salt marshes
saltmarsh
marshes
marsh

Seasonal dynamics of above- and below-ground biomass and nitrogen partitioning in Miscanthus × giganteus and Panicum virgatum across three growing seasons

Dohleman, F. G., Heaton, E. A., Arundale, R. A. & Long, S. P., Sep 2012, In : GCB Bioenergy. 4, 5, p. 534-544 11 p.

Research output: Contribution to journalArticle

Miscanthus giganteus
Panicum virgatum
belowground biomass
rhizome
Biomass

Season-long ammonia flux measurements above fertilized corn in central Illinois, USA, using relaxed eddy accumulation

Nelson, A. J., Koloutsou-Vakakis, S., Rood, M. J., Myles, L. T., Lehmann, C. MB., Bernacchi, C., Balasubramanian, S., Joo, E., Heuer, M., Vieira-Filho, M. & Lin, J., May 28 2017, In : Agricultural and Forest Meteorology. 239, p. 202-212 11 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
agricultural ecosystem

Season-long elevation of ozone concentration to projected 2050 levels under fully open-air conditions substantially decreases the growth and production of soybean

Morgan, P. B., Mies, T. A., Bollero, G. A., Nelson, R. L. & Long, S. P., Apr 1 2006, In : New Phytologist. 170, 2, p. 333-343 11 p.

Research output: Contribution to journalArticle

Ozone
Soybeans
ozone
soybeans
Growth

Secretome Prediction and Analysis in Sacred Lotus (Nelumbo nucifera Gaertn.)

Lum, G., VanBuren, R., Ming, R. R. & Min, X. J., Sep 1 2013, In : Tropical Plant Biology. 6, 2-3, p. 131-137 7 p.

Research output: Contribution to journalArticle

Nelumbo
Nelumbo nucifera
Lotus
prediction
Proteins

Sedimentary organic matter preservation: A test for selective degradation under oxic conditions

Hedges, J. I., Hu, F. S., Devol, A. H., Hartnett, H. E., Tsamakis, E. & Keil, R. G., Jan 1 1999, In : American Journal of Science. 299, 7-9, p. 529-555 27 p.

Research output: Contribution to journalArticle

oxic conditions
organic matter
degradation
oxygen
sediment

Seed and seedling ecology of a monocarpic tropical tree, Tachigalia versicolor

Kitajima, K. & Augspurger, C. K., Jan 1 1989, In : Ecology. 70, 4, p. 1102-1114 13 p.

Research output: Contribution to journalArticle

Tachigali
seedling
ecology
seed
seedlings

Seed bank dynamics in five Panamanian forests

Fornara, D. A. & Dalling, J. W., Mar 1 2005, In : Journal of Tropical Ecology. 21, 2, p. 223-226 4 p.

Research output: Contribution to journalArticle

buried seeds
tropical forests
phenology

Seed damage tolerance and seedling resprouting ability of Prioria copaifera in Panama

Dalling, J. W., Harms, K. E. & Aizprua, R., Jul 1997, In : Journal of Tropical Ecology. 13, 4, p. 481-490 10 p.

Research output: Contribution to journalArticle

Prioria copaifera
resprouting
Panama
tolerance
seedling

Seed dispersal of the tropical tree, Platypodium elegans, and the escape of its seedlings from fungal pathogens.

Augspurger, C. K., Jan 1 1983, In : Journal of Ecology. 71, 3, p. 759-771 13 p.

Research output: Contribution to journalArticle

Platypodium
damping-off
seed dispersal
damping off
pathogen

Seed dispersal patterns produced by white-faced monkeys: Implications for the dispersal limitation of neotropical tree species

Wehncke, E. V., Hubbell, S. P., Foster, R. B. & Dalling, J. W., Aug 1 2003, In : Journal of Ecology. 91, 4, p. 677-685 9 p.

Research output: Contribution to journalArticle

seed dispersal
Cebus
monkeys
seed
seeds
Trema
pioneer species
morphotype
Panama
seedling growth

Seedling growth responses to phosphorus reflect adult distribution patterns of tropical trees

Zalamea, P. C., Turner, B. L., Winter, K., Jones, F. A., Sarmiento, C. & Dalling, J. W., Oct 1 2016, In : The New phytologist. 212, 2, p. 400-408 9 p.

Research output: Contribution to journalArticle

Seedlings
Phosphorus
seedling growth
phosphorus
Growth

Seedling performance trade-Offs influencing habitat filtering along a soil nutrient gradient in a tropical forest

Anderse, K. M., Turner, B. L. & Dalling, J. W., Dec 1 2014, In : Ecology. 95, 12, p. 3399-3413 15 p.

Research output: Contribution to journalArticle

trade performance
soil nutrient
soil nutrients
tropical forests
tropical forest

Seedling survival of tropical tree species: interactions of dispersal distance, light-gaps, and pathogens.

Augspurger, C. K., Jan 1 1984, In : Ecology. 65, 6, p. 1705-1712 8 p.

Research output: Contribution to journalArticle

pathogen
seedling
seedlings
pathogens
mortality

Seed survival in soil: Interacting effects of predation, dormancy and the soil microbial community

Dalling, J. W., Davis, A. S., Schutte, B. J. & Elizabeth Arnold, A., Jan 1 2011, In : Journal of Ecology. 99, 1, p. 89-95 7 p.

Research output: Contribution to journalArticle

dormancy
microbial communities
microbial community
predation
seed

See you in the movies?

Berenbaum, M., Dec 1 2000, In : American Entomologist. 46, 4, p. 210-213 4 p.

Research output: Contribution to journalArticle

Pastinaca
New Zealand
Population
Pheromones
Phenotype

Semi-automated segmentation of pollen grains in microscopic images: A tool for three imaging modes

Johnsrud, S., Yang, H., Nayak, A. & Punyasena, S. W., Jun 4 2013, In : Grana. 52, 3, p. 181-191 11 p.

Research output: Contribution to journalArticle

segmentation
pollen
image analysis
fluorescence
wavelengths
Open Access
nitrate reduction
sequence alignment
ammonification
nitrites
amino acids

Sequencing and assembly of the transgenic papaya genome

VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 187-203 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Carica
papayas
genetically modified organisms
Genome
genome

Sequencing papaya X and Y h chromosomes reveals molecular basis of incipient sex chromosome evolution

Wang, J., Na, J. K., Yu, Q., Gschwend, A. R., Han, J., Zeng, F., Aryal, R., VanBuren, R., Murray, J. E., Zhang, W., Navajas-Pérez, R., Feltus, F. A., Lemke, C., Tong, E. J., Chen, C., Wai, C. M., Singh, R., Wang, M. L., Min, X. J., Alam, M. & 5 others, Charlesworth, D., Moore, P. H., Jiang, J., Paterson, A. H. & Ming, R., Aug 21 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 34, p. 13710-13715 6 p.

Research output: Contribution to journalArticle

Carica
Sex Chromosomes
Y Chromosome
Genes
Retroelements

Sequential Transphosphorylation of the BRI1/BAK1 Receptor Kinase Complex Impacts Early Events in Brassinosteroid Signaling

Wang, X., Kota, U., He, K., Blackburn, K., Li, J., Goshe, M. B., Huber, S. C. & Clouse, S. D., Aug 12 2008, In : Developmental cell. 15, 2, p. 220-235 16 p.

Research output: Contribution to journalArticle

Brassinosteroids
Phosphorylation
Phosphotransferases
Chemical activation
Signal transduction

Setal-mania

Berenbaum, M. R., Mar 1 2007, In : American Entomologist. 53, 1, p. 4-5 2 p.

Research output: Contribution to journalArticle

Sex chromosomes in flowering plants

Ming, R., Wang, J., Moore, P. H. & Paterson, A. H., Feb 1 2007, In : American journal of botany. 94, 2, p. 141-150 10 p.

Research output: Contribution to journalArticle

Sex Chromosomes
sex chromosomes
angiosperm
chromosome
Angiospermae

Sex chromosomes in land plants

Ming, R., Bendahmane, A. & Renner, S. S., Jun 2 2011, In : Annual Review of Plant Biology. 62, p. 485-514 30 p.

Research output: Contribution to journalArticle

Embryophyta
Sex Chromosomes
embryophytes
sex chromosomes
gynodioecy

Sex Determination: Why So Many Ways of Doing It?

Bachtrog, D., Mank, J. E., Peichel, C. L., Kirkpatrick, M., Otto, S. P., Ashman, T. L., Hahn, M. W., Kitano, J., Mayrose, I., Ming, R., Perrin, N., Ross, L., Valenzuela, N., Vamosi, J. C., Mank, J. E., Peichel, C. L., Ashman, T. L., Blackmon, H., Goldberg, E. E., Hahn, M. W. & 8 others, Kirkpatrick, M., Kitano, J., Mayrose, I., Ming, R., Pennell, M. W., Perrin, N., Valenzuela, N. & Vamosi, J. C., Jan 1 2014, In : PLoS biology. 12, 7, p. 1-13 13 p., e1001899.

Research output: Contribution to journalArticle

Chromosomes
Animals
Genes
Earth (planet)
gender

Sex determination in flowering plants: Papaya as a model system

Aryal, R. & Ming, R. R., Mar 1 2014, In : Plant Science. 217-218, p. 56-62 7 p.

Research output: Contribution to journalReview article

Carica
papayas
Angiospermae
Sex Chromosomes
gender

Sex determination in papaya

Ming, R., Yu, Q. & Moore, P. H., Jun 2007, In : Seminars in Cell and Developmental Biology. 18, 3, p. 401-408 8 p.

Research output: Contribution to journalReview article

Carica
Sex Determination Processes
Suppressor Genes
Sex Chromosomes
Genes

Sex specific expression and distribution of small RNAs in papaya

Aryal, R., Jagadeeswaran, G., Zheng, Y., Yu, Q., Sunkar, R. & Ming, R., Jan 13 2014, In : BMC genomics. 15, 1, 20.

Research output: Contribution to journalArticle

Carica
MicroRNAs
RNA
Y Chromosome
X Chromosome

Shared genes but not shared genetic variation: Legume colonization by two belowground symbionts

Ossler, J. N. & Heath, K. D., Mar 2018, In : American Naturalist. 191, 3, p. 395-406 12 p.

Research output: Contribution to journalArticle

symbiont
symbionts
genetic variation
pleiotropy
colonization

Shifts in microbial communities in soil, rhizosphere and roots of two major crop systems under elevated CO2 and O3

Wang, P., Marsh, E. L., Ainsworth, E. A., Leakey, A. D. B., Sheflin, A. M. & Schachtman, D. P., Dec 1 2017, In : Scientific reports. 7, 1, 15019.

Research output: Contribution to journalArticle

microbial communities
rhizosphere
corn
root exudates
crops

Short dry spells in the wet season increase mortality of tropical pioneer seedlings

Engelbrecht, B. M. J., Dalling, J. W., Pearson, T. R. H., Wolf, R. L., Gálvez, D. A., Koehler, T., Tyree, M. T. & Kursar, T. A., Jun 1 2006, In : Oecologia. 148, 2, p. 258-269 12 p.

Research output: Contribution to journalArticle

wet season
dry season
seedling
mortality
seedlings

Short-termfertilizer application alters phenotypic traits of symbiotic nitrogen fixing bacteria

Simonsen, A. K., Han, S., Rekret, P., Rentschler, C. S., Heath, K. D. & Stinchcombe, J. R., Jan 1 2015, In : PeerJ. 2015, 10, e1291.

Research output: Contribution to journalArticle

nitrogen-fixing bacteria
Fertilizers
Rhizobium
Bacteria
Nitrogen

Siberian Miscanthus sacchariflorus accessions surpass the exceptional chilling tolerance of the most widely cultivated clone of Miscanthus x giganteus

Pignon, C. P., Spitz, I., Sacks, E. J., Jørgensen, U., Kørup, K. & Long, S. P., Jul 2019, In : GCB Bioenergy. 11, 7, p. 883-894 12 p.

Research output: Contribution to journalArticle

Open Access
Miscanthus sacchariflorus
Miscanthus giganteus
Chilling
cold tolerance
clone

Siculosciadium, a new monotypic genus of Apiaceae from Sicily

Brullo, C., Brullo, S., Downie, S. R., Danderson, C. A. & Del Galdo, G. G., Jul 1 2013, In : Annals of the Missouri Botanical Garden. 99, 1, p. 1-18 18 p.

Research output: Contribution to journalArticle

Apiaceae
Sicily
new genus
Peucedanum
phylogenetics
physical defense
Miscanthus giganteus
Panicum virgatum
energy crops
bioenergy

Similar photosynthetic response to elevated carbon dioxide concentration in species with different phloem loading strategies

Bishop, K. A., Lemonnier, P., Quebedeaux, J. C., Montes, C. M., Leakey, A. & Ainsworth, E., Sep 1 2018, In : Photosynthesis research. 137, 3, p. 453-464 12 p.

Research output: Contribution to journalArticle

phloem loading
Phloem
Carbon Monoxide
Carbon Dioxide
carbon dioxide

Simplify, simplify: Lifestyle and compact genome of the body louse provide a unique functional genomics opportunity

Pittendrigh, B. R., Berenbaum, M. R., Seufferheld, M. J., Margam, V. M., Strycharz, J. P., Yoon, K. S., Sun, W., Reenan, R., Lee, S. H. & Clark, J. M., Mar 1 2011, In : Communicative and Integrative Biology. 4, 2, p. 188-191 4 p.

Research output: Contribution to journalArticle

Pediculus humanus
Pediculus
Genomics
lifestyle
Life Style

Simulated heat waves during maize reproductive stages alter reproductive growth but have no lasting effect when applied during vegetative stages

Siebers, M. H., Slattery, R. A., Yendrek, C. R., Locke, A. M., Drag, D., Ainsworth, E., Bernacchi, C. & Ort, D. R., Mar 1 2017, In : Agriculture, Ecosystems and Environment. 240, p. 162-170 9 p.

Research output: Contribution to journalArticle

vegetative growth
maize
heat
corn
biomass

Simultaneous improvement in productivity, water use, and albedo through crop structural modification

Drewry, D. T., Kumar, P. & Long, S. P., Jun 2014, In : Global change biology. 20, 6, p. 1955-1967 13 p.

Research output: Contribution to journalArticle

Crops
water use
albedo
Productivity
canopy

Single chain antibody (sca) encoding genes: One-step construction and expression in eukaryotic cells

Davis, G. T., Bedzyk, W. D., Voss, E. W. & Jacobs, T. W., Feb 1991, In : Bio/Technology. 9, 2, p. 165-169 5 p.

Research output: Contribution to journalArticle

Single-Chain Antibodies
Gene encoding
Eukaryotic Cells
Immunoglobulin Light Chains
Antibodies

Sisal/agave

Davis, S. C. & Long, S. P., Jan 1 2015, Industrial Crops: Breeding for Bioenergy and Bioproducts. Springer New York, p. 335-349 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Agave
sisal
feedstocks
Biofuels
biofuels

Site-directed mutagenesis of serine 158 demonstrates its role in spinach leaf sucrose-phosphate synthase modulation

Toroser, D., McMichael, R., Krause, K. P., Kurreck, J., Sonnewald, U., Stitt, M. & Huber, S. C., Feb 1 1999, In : Plant Journal. 17, 4, p. 407-413 7 p.

Research output: Contribution to journalArticle

sucrose-phosphate synthase
Spinacia oleracea
site-directed mutagenesis
Site-Directed Mutagenesis
spinach

Site-specific regulatory interaction between spinach leaf sucrose-phosphate synthase and 14-3-3 proteins

Toroser, D., Athwal, G. S. & Huber, S. C., Sep 11 1998, In : FEBS Letters. 435, 1, p. 110-114 5 p.

Research output: Contribution to journalArticle

sucrose-phosphate synthase
14-3-3 Proteins
Spinacia oleracea
Phosphopeptides
Surface Plasmon Resonance

Site-specific serine phosphorylation of spinach leaf sucrose-phosphate synthase

Huber, J. L. A. & Huber, S. C., Jan 1 1992, In : Biochemical Journal. 283, 3, p. 877-882 6 p.

Research output: Contribution to journalArticle

sucrose-phosphate synthase
Okadaic Acid
Phosphorylation
Spinacia oleracea
Serine

Six millennia of summer temperature variation based on midge analysis of lake sediments from Alaska

Clegg, B. F., Clarke, G. H., Chipman, M. L., Chou, M., Walker, I. R., Tinner, W. & Hu, F. S., Nov 1 2010, In : Quaternary Science Reviews. 29, 23-24, p. 3308-3316 9 p.

Research output: Contribution to journalArticle

midges
lacustrine deposit
lakes
sediments
summer

Size parameters, size-class distribution and area-number relationship of microscopic charcoal: Relevance for fire reconstruction

Tinner, W. & Hu, F. S., Jul 1 2003, In : Holocene. 13, 4, p. 499-505 7 p.

Research output: Contribution to journalArticle

charcoal
pollen
vegetation type
distribution
parameter

Slow dark deactivation of Arabidopsis chloroplast ATP synthase caused by a mutation in a nonplastidic SAC domain protein

Gong, P., Wu, G. & Ort, D. R., May 1 2006, In : Photosynthesis research. 88, 2, p. 133-142 10 p.

Research output: Contribution to journalArticle

Chloroplast Proton-Translocating ATPases
H-transporting ATP synthase
Arabidopsis
chloroplasts
Adenosine Triphosphate
Photosynthesis
Solar System
Sun
Triticum
shade