Research Output

2015

The Arabidopsis vacuolar sugar transporter SWEET2 limits carbon sequestration from roots and restricts Pythium infection

Chen, H. Y., Huh, J. H., Yu, Y. C., Ho, L. H., Chen, L. Q., Tholl, D., Frommer, W. B. & Guo, W. J., Sep 1 2015, In : Plant Journal. 83, 6, p. 1046-1058 13 p.

Research output: Contribution to journalArticle

The butterfly plant arms-race escalated by gene and genome duplications

Edger, P. P., Heidel-Fischer, H. M., Bekaert, M., Rota, J., Glöckner, G., Platts, A. E., Heckel, D. G., Der, J. P., Wafula, E. K., Tang, M., Hofberger, J. A., Smithson, A., Hall, J. C., Blanchette, M., Bureau, T. E., Wright, S. I., DePamphilis, C. W., Schranz, M. E., Barker, M. S., Conant, G. C. & 5 others, Wahlberg, N., Vogel, H., Pires, J. C., Wheat, C. W. & Berenbaum, M. R., Jul 7 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 27, p. 8362-8366 5 p.

Research output: Contribution to journalArticle

The influence of photosynthetic acclimation to rising CO2 and warmer temperatures on leaf and canopy photosynthesis models

Bagley, J., Rosenthal, D. M., Ruiz-Vera, U. M., Siebers, M. H., Kumar, P., Ort, D. R. & Bernacchi, C. J., Feb 2015, In : Global Biogeochemical Cycles. 29, 2, p. 194-206 13 p.

Research output: Contribution to journalArticle

The pineapple genome and the evolution of CAM photosynthesis

Ming, R., VanBuren, R., Wai, C. M., Tang, H., Schatz, M. C., Bowers, J. E., Lyons, E., Wang, M. L., Chen, J., Biggers, E., Zhang, J., Huang, L., Zhang, L., Miao, W., Zhang, J., Ye, Z., Miao, C., Lin, Z., Wang, H., Zhou, H. & 50 others, Yim, W. C., Priest, H. D., Zheng, C., Woodhouse, M., Edger, P. P., Guyot, R., Guo, H. B., Guo, H., Zheng, G., Singh, R., Sharma, A., Min, X., Zheng, Y., Lee, H., Gurtowski, J., Sedlazeck, F. J., Harkess, A., McKain, M. R., Liao, Z., Fang, J., Liu, J., Zhang, X., Zhang, Q., Hu, W., Qin, Y., Wang, K., Chen, L. Y., Shirley, N., Lin, Y. R., Liu, L. Y., Hernandez, A. G., Wright, C. L., Bulone, V., Tuskan, G. A., Heath, K., Zee, F., Moore, P. H., Sunkar, R., Leebens-Mack, J. H., Mockler, T., Bennetzen, J. L., Freeling, M., Sankoff, D., Paterson, A. H., Zhu, X., Yang, X., Smith, J. A. C., Cushman, J. C., Paull, R. E. & Yu, Q., Dec 1 2015, In : Nature Genetics. 47, 12, p. 1435-1442 8 p.

Research output: Contribution to journalArticle

Transport of sugars

Chen, L. Q., Cheung, L. S., Feng, L., Tanner, W. & Frommer, W. B., Jun 2 2015, In : Annual review of biochemistry. 84, p. 865-894 30 p.

Research output: Contribution to journalReview article

Tripartite mutualism: facilitation or trade-offs between rhizobial and mycorrhizal symbionts of legume hosts

Ossler, J. N., Zielinski, C. A. & Heath, K. D., Aug 1 2015, In : American journal of botany. 102, 8, p. 1332-1341 10 p.

Research output: Contribution to journalArticle

Ultra oil-producing

Huang, H., Long, S. P. & Singh, V., May 1 2015, International News on Fats, Oils and Related Materials, 26, 5, p. 278-282 5 p.

Research output: Contribution to specialist publicationArticle

Variability in potential to exploit different soil organic phosphorus compounds among tropical montane tree species

Steidinger, B. S., Turner, B. L., Corrales, A. & Dalling, J. W., Jan 1 2015, In : Functional Ecology. 29, 1, p. 121-130 10 p.

Research output: Contribution to journalArticle

Variation in canopy litterfall along a precipitation and soil fertility gradient in a panamanian lower montane forest

Heineman, K. D., Caballero, P., Morris, A., Velasquez, C., Serrano, K., Ramos, N., Gonzalez, J., Mayorga, L., Corre, M. D. & Dalling, J. W., May 1 2015, In : Biotropica. 47, 3, p. 300-309 10 p.

Research output: Contribution to journalArticle

Who'll stomp the rain?

Berenbaum, M. R., Jan 1 2015, In : American Entomologist. 61, 3, p. 133-135 3 p.

Research output: Contribution to journalComment/debate

Xenobiotic detoxification pathways in honey bees

Berenbaum, M. R. & Johnson, R. M., May 16 2015, In : Current Opinion in Insect Science. 10, p. 51-58 8 p.

Research output: Contribution to journalReview article

XX-rated entomologists in the Movies

Berenbaum, M. R., Dec 1 2015, In : American Entomologist. 61, 4, p. 204-206 3 p.

Research output: Contribution to journalArticle

2014

A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation

Macho, A. P., Schwessinger, B., Ntoukakis, V., Brutus, A., Segonzac, C., Roy, S., Kadota, Y., Oh, M. H., Sklenar, J., Derbyshire, P., Lozano-Durań, R., Malinovsky, F. G., Monaghan, J., Menke, F. L., Huber, S. C., He, S. Y. & Zipfel, C., Jan 1 2014, In : Science. 343, 6178, p. 1509-1512 4 p.

Research output: Contribution to journalArticle

Accumulation of interspersed and sex-specific repeats in the non-recombining region of papaya sex chromosomes

Na, J. K., Wang, J. & Ming, R., May 4 2014, In : BMC genomics. 15, 1, 335.

Research output: Contribution to journalArticle

Accuracy and consistency of grass pollen identification by human analysts using electron micrographs of surface ornamentation

Mander, L., Baker, S. J., Belcher, C. M., Haselhorst, D. S., Rodriguez, J., Thorn, J. L., Tiwari, S., Urrego, D. H., Wesseln, C. J. & Punyasena, S. W., Aug 2014, In : Applications in Plant Sciences. 2, 8, 1400031.

Research output: Contribution to journalArticle

A footprint of past climate change on the diversity and population structure of Miscanthus sinensis

Clark, L. V., Brummer, J. E., Głowacka, K., Hall, M. C., Heo, K., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Jul 2014, In : Annals of botany. 114, 1, p. 97-107 11 p.

Research output: Contribution to journalArticle

A mean field model for competition: From neutral ecology to the Red Queen

O'Dwyer, J. P. & Chisholm, R., Aug 2014, In : Ecology Letters. 17, 8, p. 961-969 9 p.

Research output: Contribution to journalArticle

Amplify the signal: Graduate training in broader impacts of scientific research

Heath, K. D., Bagley, E., Berkey, A. J. M., Birlenbach, D. M., Carr-Markell, M. K., Crawford, J. W., Duennes, M. A., Han, J. O., Haus, M. J., Hellert, S. M., Holmes, C. J., Mommer, B. C., Ossler, J., Peery, R., Powers, L., Scholes, D. R., Silliman, C. A., Stein, L. R. & Wesseln, C. J., Jun 2014, In : BioScience. 64, 6, p. 517-523 7 p.

Research output: Contribution to journalArticle

A neotropical miocene pollen database employing image-based search and semantic modeling

Han, J. G., Cao, H., Barb, A., Punyasena, S. W., Jaramillo, C. & Shyu, C. R., Aug 2014, In : Applications in Plant Sciences. 2, 8, 1400030.

Research output: Contribution to journalArticle

Approaches to advance scientific understanding of macrosystems ecology

Levy, O., Ball, B. A., Bond-Lamberty, B., Cheruvelil, K. S., Finley, A. O., Lottig, N. R., Punyasena, S. W., Xiao, J., Zhou, J., Buckley, L. B., Filstrup, C. T., Keitt, T. H., Kellner, J. R., Knapp, A. K., Richardson, A. D., Tcheng, D., Toomey, M., Vargas, R., Voordeckers, J. W., Wagner, T. & 1 others, Williams, J. W., Feb 1 2014, In : Frontiers in Ecology and the Environment. 12, 1, p. 15-23 9 p.

Research output: Contribution to journalArticle

Bioinformatic and biometric methods in plant morphology

Punyasena, S. W. & Smith, S. Y., Aug 2014, In : Applications in Plant Sciences. 2, 8, 1400071.

Research output: Contribution to journalArticle

Can the cyanobacterial carbon-concentrating mechanism increase photosynthesis in crop species? A theoretical analysis

McGrath, J. M. & Long, S. P., Apr 1 2014, In : Plant physiology. 164, 4, p. 2247-2261 15 p.

Research output: Contribution to journalArticle

Climate influences on water and sediment properties of Genovesa Crater Lake, Galápagos

Conroy, J. L., Thompson, D. M., Collins, A., Overpeck, J. T., Bush, M. B. & Cole, J. E., Jan 1 2014, In : Journal of Paleolimnology. 52, 4, p. 331-347 17 p.

Research output: Contribution to journalArticle

Climate refugia: Joint inference from fossil records, species distribution models and phylogeography

Gavin, D. G., Fitzpatrick, M. C., Gugger, P. F., Heath, K. D., Rodríguez-Sánchez, F., Dobrowski, S. Z., Hampe, A., Hu, F. S., Ashcroft, M. B., Bartlein, P. J., Blois, J. L., Carstens, B. C., Davis, E. B., de Lafontaine, G., Edwards, M. E., Fernandez, M., Henne, P. D., Herring, E. M., Holden, Z. A., Kong, W. S. & 8 others, Liu, J., Magri, D., Matzke, N. J., Mcglone, M. S., Saltré, F., Stigall, A. L., Tsai, Y. H. E. & Williams, J. W., Oct 2014, In : New Phytologist. 204, 1, p. 37-54 18 p.

Research output: Contribution to journalReview article

Cloning major genes controlling fruit flesh color in papaya

Aryal, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 341-353 13 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Connecting functional and statistical definitions of genotype by genotype interactions in coevolutionary studies

Heath, K. D. & Nuismer, S. L., Jan 1 2014, In : Frontiers in Genetics. 5, APR, Article 77.

Research output: Contribution to journalArticle

Constraints on the salinity-oxygen isotope relationship in the central tropical Pacific Ocean

Conroy, J. L., Cobb, K. M., Lynch-Stieglitz, J. & Polissar, P. J., Apr 20 2014, In : Marine Chemistry. 161, p. 26-33 8 p.

Research output: Contribution to journalArticle

Distinct transcriptional profiles of ozone stress in soybean (Glycine max) flowers and pods

Leisner, C. P., Ming, R. & Ainsworth, E. A., Jan 1 2014, In : BMC Plant Biology. 14, 1, 335.

Research output: Contribution to journalArticle

Elements required for an efficient NADP-malic enzyme type C4 photosynthesis

Wang, Y., Long, S. P. & Zhu, X. G., Apr 1 2014, In : Plant physiology. 164, 4, p. 2231-2246 16 p.

Research output: Contribution to journalArticle

Evidence for emergence of sex-determining gene(s) in a centromeric region in vasconcellea parviflora

Iovene, M., Yu, Q., Ming, R. & Jiang, J., Feb 1 2014, In : Genetics. 199, 2, p. 413-421 9 p.

Research output: Contribution to journalArticle

Evolution of tolerance in an invasive weed after reassociation with its specialist herbivore

Jogesh, T., Stanley, M. C. & Berenbaum, M. R., Oct 1 2014, In : Journal of Evolutionary Biology. 27, 11, p. 2334-2346 13 p.

Research output: Contribution to journalArticle

Explaining mutualism variation: A new evolutionary paradox?

Heath, K. D. & Stinchcombe, J. R., Feb 1 2014, In : Evolution. 68, 2, p. 309-317 9 p.

Research output: Contribution to journalComment/debate

Features of transcriptome in trioecious papaya revealed by a large-scale sequencing of ESTs and comparative analysis in higher plants

Zeng, F., Yu, Q., Hou, S., Moore, P. H., Alam, M. & Ming, R. R., Jan 1 2014, In : Plant OMICS. 7, 6, p. 450-460 11 p.

Research output: Contribution to journalArticle

Genetics and genomics of papaya

Ming, R. & Moore, P. H., Jan 1 2014, Springer New York. 438 p.

Research output: Book/ReportBook

Genomic analyses of the CAM plant pineapple

Zhang, J., Liu, J. & Ming, R., Jul 2014, In : Journal of experimental botany. 65, 13, p. 3395-3404 10 p.

Research output: Contribution to journalReview article

Genomics of papaya sex chromosomes

VanBuren, R. & Ming, R., Jan 1 2014, Genetics and Genomics of Papaya. Springer New York, p. 309-326 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Genomics of sex determination

Zhang, J., Boualem, A., Bendahmane, A. & Ming, R., Apr 2014, In : Current opinion in plant biology. 18, 1, p. 110-116 7 p.

Research output: Contribution to journalReview article

Happy Anniversary, Journal of Chemical Ecology!

Berenbaum, M. R., Apr 1 2014, In : Journal of Chemical Ecology. 40, 4, 1 p.

Research output: Contribution to journalComment/debate

Herbivores and nutrients control grassland plant diversity via light limitation

Borer, E. T., Seabloom, E. W., Gruner, D. S., Harpole, W. S., Hillebrand, H., Lind, E. M., Adler, P. B., Alberti, J., Anderson, T. M., Bakker, J. D., Biederman, L., Blumenthal, D., Brown, C. S., Brudvig, L. A., Buckley, Y. M., Cadotte, M., Chu, C., Cleland, E. E., Crawley, M. J., Daleo, P. & 35 others, Damschen, E. I., Davies, K. F., Decrappeo, N. M., Du, G., Firn, J., Hautier, Y., Heckman, R. W., Hector, A., Hillerislambers, J., Iribarne, O., Klein, J. A., Knops, J. M. H., La Pierre, K. J., Leakey, A. D. B., Li, W., MacDougall, A. S., McCulley, R. L., Melbourne, B. A., Mitchell, C. E., Moore, J. L., Mortensen, B., O'Halloran, L. R., Orrock, J. L., Pascual, J., Prober, S. M., Pyke, D. A., Risch, A. C., Schuetz, M., Smith, M. D., Stevens, C. J., Sullivan, L. L., Williams, R. J., Wragg, P. D., Wright, J. P. & Yang, L. H., Jan 1 2014, In : Nature. 508, 7497, p. 517-520 4 p.

Research output: Contribution to journalArticle

Hit-and-run transcriptional control by bZIP1 mediates rapid nutrient signaling in Arabidopsis

Para, A., Li, Y., Marshall-Coloń, A., Varala, K., Francoeur, N. J., Moran, T. M., Edwards, M. B., Hackley, C., Bargmann, B. O. R., Birnbaum, K. D., Richard McCombie, W., Krouk, G. & Coruzzi, G. M., Jul 15 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 28, p. 10371-10376 6 p.

Research output: Contribution to journalArticle

Host plant records of Antherina Suraka (Boisduval, 1833) (Saturniidae) in Madagascar

Randrianandrasana, M., Razafindraleva, H. A. & Berenbaum, M. R., Jun 2 2014, In : Journal of the Lepidopterists' Society. 68, 2, p. 130-140 11 p.

Research output: Contribution to journalArticle

Identification of species in the angiosperm family Apiaceae using DNA barcodes

Liu, J., Shi, L., Han, J., Li, G., Lu, H., Hou, J., Zhou, X., Meng, F. & Downie, S. R., Nov 1 2014, In : Molecular ecology resources. 14, 6, p. 1231-1238 8 p.

Research output: Contribution to journalArticle

Identifying the pollen of an extinct spruce species in the Late Quaternary sediments of the Tunica Hills region, south-eastern United States

Mander, L., Rodriguez, J., Mueller, P. G., Jackson, S. T. & Punyasena, S. W., Oct 1 2014, In : Journal of Quaternary Science. 29, 7, p. 711-721 11 p.

Research output: Contribution to journalArticle