Research Output

2020

Seasonal Evolution of Canopy Stomatal Conductance for a Prairie and Maize Field in the Midwestern United States from Continuous Carbonyl Sulfide Fluxes

Berkelhammer, M., Alsip, B., Matamala, R., Cook, D., Whelan, M. E., Joo, E., Bernacchi, C., Miller, J. & Meyers, T., Mar 28 2020, In : Geophysical Research Letters. 47, 6, e2019GL085652.

Research output: Contribution to journalArticle

Spatiotemporal derivation of intermittent ponding in a maize-soybean landscape from planet labs cubesat images

Paul, R. F., Cai, Y., Peng, B., Yang, W. H., Guan, K. & Delucia, E. H., Jun 1 2020, In : Remote Sensing. 12, 12, 1942.

Research output: Contribution to journalArticle

Open Access

Species dynamics and interactions via metabolically informed consumer-resource models

Muscarella, M. E. & O’Dwyer, J. P., 2020, (Accepted/In press) In : Theoretical Ecology.

Research output: Contribution to journalArticle

The genome of kenaf (Hibiscus cannabinus L.) provides insights into bast fibre and leaf shape biogenesis

Zhang, L., Xu, Y., Zhang, X., Ma, X., Zhang, L., Liao, Z., Zhang, Q., Wan, X., Cheng, Y., Zhang, J., Li, D., Zhang, L., Xu, J., Tao, A., Lin, L., Fang, P., Chen, S., Qi, R., Xu, X., Qi, J. & 1 others, Ming, R., Aug 1 2020, In : Plant Biotechnology Journal. 18, 8, p. 1796-1809 14 p.

Research output: Contribution to journalArticle

Open Access

The influence of rising tropospheric carbon dioxide and ozone on plant productivity

Ainsworth, E. A., Lemonnier, P. & Wedow, J. M., Jan 1 2020, In : Plant Biology. 22, S1, p. 5-11 7 p.

Research output: Contribution to journalReview article

Open Access

The role of cis-elements in the evolution of crassulacean acid metabolism photosynthesis

Chen, L. Y., Xin, Y., Wai, C. M., Liu, J. & Ming, R., Dec 1 2020, In : Horticulture Research. 7, 1, 5.

Research output: Contribution to journalReview article

Open Access

Towards a multiscale crop modelling framework for climate change adaptation assessment

Peng, B., Guan, K., Tang, J., Ainsworth, E. A., Asseng, S., Bernacchi, C. J., Cooper, M., Delucia, E. H., Elliott, J. W., Ewert, F., Grant, R. F., Gustafson, D. I., Hammer, G. L., Jin, Z., Jones, J. W., Kimm, H., Lawrence, D. M., Li, Y., Lombardozzi, D. L., Marshall-Colon, A. & 7 others, Messina, C. D., Ort, D. R., Schnable, J. C., Vallejos, C. E., Wu, A., Yin, X. & Zhou, W., Apr 2020, In : Nature Plants. 6, 4, p. 338-348 11 p.

Research output: Contribution to journalReview article

Towards oilcane: Engineering hyperaccumulation of triacylglycerol into sugarcane stems

Parajuli, S., Kannan, B., Karan, R., Sanahuja, G., Liu, H., Garcia-Ruiz, E., Kumar, D., Singh, V., Zhao, H., Long, S., Shanklin, J. & Altpeter, F., Jul 1 2020, In : GCB Bioenergy. 12, 7, p. 476-490 15 p.

Research output: Contribution to journalArticle

Open Access

TRY plant trait database – enhanced coverage and open access

The Nutrient Network, Jan 1 2020, In : Global change biology. 26, 1, p. 119-188 70 p.

Research output: Contribution to journalArticle

Open Access

Twenty-five years of GCB: Putting the biology into global change

Long, S. P., Jan 1 2020, In : Global change biology. 26, 1, p. 1-2 2 p.

Research output: Contribution to journalEditorial

Open Access

Variation in photosynthetic induction between rice accessions and its potential for improving productivity

Acevedo-Siaca, L. G., Coe, R., Wang, Y., Kromdijk, J., Quick, W. P. & Long, S. P., Aug 1 2020, In : New Phytologist. 227, 4, p. 1097-1108 12 p.

Research output: Contribution to journalArticle

Open Access
2019

A Comparative Analysis of Anthropogenic CO2 Emissions at City Level Using OCO-2 Observations: A Global Perspective

Fu, P., Xie, Y., Moore, C. E., Myint, S. W. & Bernacchi, C. J., Sep 1 2019, In : Earth's Future. 7, 9, p. 1058-1070 13 p.

Research output: Contribution to journalArticle

Open Access

A comparative analysis of complete plastid genomes from Prangos fedtschenkoi and Prangos lipskyi (Apiaceae)

Mustafina, F. U., Yi, D. K., Choi, K., Shin, C. H., Tojibaev, K. S. & Downie, S. R., Jan 2019, In : Ecology and Evolution. 9, 1, p. 364-377 14 p.

Research output: Contribution to journalArticle

Alder distribution and expansion across a tundra hillslope: implications for local N cycling

Salmon, V. G., Breen, A. L., Kumar, J., Lara, M. J., Thornton, P. E., Wullschleger, S. D. & Iversen, C. M., Oct 16 2019, In : Frontiers in Plant Science. 10

Research output: Contribution to journalArticle

Open Access

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

Analysis of genetic diversity of lychee (Litchi chinensis Sonn.) and wild forest relatives in the Sapindaceae from Vietnam using microsatellites

Tran, H., Kanzaki, S., Triest, L., Hormaza, I., Kuk, N. J., Ming, R., Bousquet, J., Khasa, D. & Van Damme, P., Dec 1 2019, In : Genetic Resources and Crop Evolution. 66, 8, p. 1653-1669 17 p.

Research output: Contribution to journalArticle

A physical model-based method for retrieving urban land surface temperatures under cloudy conditions

Fu, P., Xie, Y., Weng, Q., Myint, S., Meacham-Hensold, K. & Bernacchi, C., Sep 1 2019, In : Remote Sensing of Environment. 230, 111191.

Research output: Contribution to journalArticle

Are we approaching a water ceiling to maize yields in the United States?

Delucia, E. H., Chen, S., Guan, K., Peng, B., Li, Y., Gomez-Casanovas, N., Kantola, I. B., Bernacchi, C., Huang, Y., Long, S. P. & Ort, D. R., Jun 18 2019, In : Ecosphere. 10, 6, e02773.

Research output: Contribution to journalArticle

Open Access

Assembling and analysis of sanicula orthacantha chloroplast genome

Chen, Z., Yao, X., Downie, S. R. & Wang, Q., Apr 2019, In : Biodiversity Science. 27, 4, p. 366-372 7 p.

Research output: Contribution to journalArticle

Assembly of allele-aware, chromosomal-scale autopolyploid genomes based on Hi-C data

Zhang, X., Zhang, S., Zhao, Q., Ming, R. & Tang, H., Aug 1 2019, In : Nature plants. 5, 8, p. 833-845 13 p.

Research output: Contribution to journalArticle

Assembly of the 373k gene space of the polyploid sugarcane genome reveals reservoirs of functional diversity in the world's leading biomass crop

Souza, G. M., Van Sluys, M. A., Lembke, C. G., Lee, H., Margarido, G. R. A., Hotta, C. T., Gaiarsa, J. W., Diniz, A. L., Oliveira, M. D. M., Ferreira, S. D. S., Nishiyama, M. Y., Ten-Caten, F., Ragagnin, G. T., Andrade, P. D. M., De Souza, R. F., Nicastro, G. G., Pandya, R., Kim, C., Guo, H., Durham, A. M. & 9 others, Carneiro, M. S., Zhang, J., Zhang, X., Zhang, Q., Ming, R., Schatz, M. C., Davidson, B., Paterson, A. H. & Heckerman, D., Dec 6 2019, In : GigaScience. 8, 12, giz129.

Research output: Contribution to journalArticle

Open Access

A subsidiary cell-localized glucose transporter promotes stomatal conductance and photosynthesis

Wang, H., Yan, S., Xin, H., Huang, W., Zhang, H., Teng, S., Yu, Y. C., Fernie, A. R., Lu, X., Li, P., Li, S., Zhang, C., Ruan, Y. L., Chen, L. Q. & Langa, Z., Jun 2019, In : Plant Cell. 31, 6, p. 1328-1343 16 p.

Research output: Contribution to journalArticle

Automated detection of thermoerosion in permafrost ecosystems using temporally dense Landsat image stacks

Lara, M. J., Chipman, M. L. & Hu, F. S., Feb 2019, In : Remote Sensing of Environment. 221, p. 462-473 12 p.

Research output: Contribution to journalArticle

Auxin regulation involved in gynoecium morphogenesis of papaya flowers

Zhou, P., Fatima, M., Ma, X., Liu, J. & Ming, R., Dec 1 2019, In : Horticulture Research. 6, 1, 119.

Research output: Contribution to journalArticle

Open Access

Biomass yield in a genetically diverse Miscanthus sinensis germplasm panel evaluated at five locations revealed individuals with exceptional potential

Clark, L. V., Dwiyanti, M. S., Anzoua, K. G., Brummer, J. E., Ghimire, B. K., Głowacka, K., Hall, M., Heo, K., Jin, X., Lipka, A. E., Peng, J., Yamada, T., Yoo, J. H., Yu, C. Y., Zhao, H., Long, S. P. & Sacks, E. J., Oct 1 2019, In : GCB Bioenergy. 11, 10, p. 1125-1145 21 p.

Research output: Contribution to journalArticle

Open Access

Black walnut alley cropping is economically competitive with row crops in the Midwest USA

Wolz, K. J. & DeLucia, E. H., Jan 2019, In : Ecological Applications. 29, 1, e01829.

Research output: Contribution to journalArticle

Bot-Flying

Berenbaum, M., Jun 7 2019, In : American Entomologist. 65, 2, p. 76-78

Research output: Contribution to journalArticle

BSD2 is a Rubisco-specific assembly chaperone, forms intermediary hetero-oligomeric complexes, and is nonlimiting to growth in tobacco

Conlan, B., Birch, R., Kelso, C., Holland, S., De Souza, A. P., Long, S. P., Beck, J. L. & Whitney, S. M., Apr 2019, In : Plant Cell and Environment. 42, 4, p. 1287-1301 15 p.

Research output: Contribution to journalArticle

Bundle sheath chloroplast volume can house sufficient Rubisco to avoid limiting C4 photosynthesis during chilling

Pignon, C. P., Lundgren, M. R., Osborne, C. P. & Long, S. P., Jan 1 2019, In : Journal of experimental botany. 70, 1, p. 357-365 9 p.

Research output: Contribution to journalArticle

Carbon assimilation in crops at high temperatures

Slattery, R. A. & Ort, D. R., Oct 1 2019, In : Plant Cell and Environment. 42, 10, p. 2750-2758 9 p.

Research output: Contribution to journalReview article

Open Access

Catching ZZZZs

Berenbaum, M., Dec 12 2019, In : American Entomologist. 65, 4, p. 220-222 3 p.

Research output: Contribution to journalReview article

Colonization of seeds by soilborne fungi: Linking seed dormancy-defense syndromes, evolutionary constraints, and fungal traits

Stump, S. M., Sarmiento, C., Zalamea, P. C., Dalling, J. W., Davis, A. S., Shaffer, J. P. & Arnold, A. E., Apr 5 2019, Seed Endophytes: Biology and Biotechnology. Springer International Publishing, p. 465-481 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Comparative Analysis of SUS Gene Family between Saccharum officinarum and Saccharum spontaneum

Shi, Y., Xu, H., Shen, Q., Lin, J., Wang, Y., Hua, X., Yao, W., Yu, Q., Ming, R. & Zhang, J., Sep 1 2019, In : Tropical Plant Biology. 12, 3, p. 174-185 12 p.

Research output: Contribution to journalArticle

Comparative genomics revealed the gene evolution and functional divergence of magnesium transporter families in Saccharum

Wang, Y., Hua, X., Xu, J., Chen, Z., Fan, T., Zeng, Z., Wang, H., Hour, A. L., Yu, Q., Ming, R. & Zhang, J., Jan 24 2019, In : BMC genomics. 20, 1, 83.

Research output: Contribution to journalArticle

Comparing DNA, RNA and protein levels for measuring microbial dynamics in soil microcosms amended with nitrogen fertilizer

Orellana, L. H., Hatt, J. K., Iyer, R., Chourey, K., Hettich, R. L., Spain, J. C., Yang, W. H., Chee-Sanford, J. C., Sanford, R. A., Löffler, F. E. & Konstantinidis, K. T., Dec 1 2019, In : Scientific reports. 9, 1, 17630.

Research output: Contribution to journalArticle

Open Access

Consequences of climatic thresholds for projecting fire activity and ecological change

Young, A. M., Higuera, P. E., Abatzoglou, J. T., Duffy, P. A. & Hu, F. S., Apr 2019, In : Global Ecology and Biogeography. 28, 4, p. 521-532 12 p.

Research output: Contribution to journalArticle

Deleterious mutation burden and its association with complex traits in sorghum (Sorghum bicolor)

Valluru, R., Gazave, E. E., Fernandes, S. B., Ferguson, J. N., Lozano, R., Hirannaiah, P., Zuo, T., Brown, P. J., Leakey, A. D. B., Gore, M. A., Buckler, E. S. & Bandillo, N., Mar 2019, In : Genetics. 211, 3, p. 1075-1087 13 p.

Research output: Contribution to journalArticle

Differential gene expression among three sex types reveals a MALE STERILITY 1 (CpMS1) for sex differentiation in papaya

Zerpa-Catanho, D., Wai, J., Wang, M. L., Yu, LA., Nguyen, J. & Ming, R., Dec 9 2019, In : BMC Plant Biology. 19, 1, 545.

Research output: Contribution to journalArticle

Open Access

Directions for research and training in plant omics: Big Questions and Big Data

Argueso, C. T., Assmann, S. M., Birnbaum, K. D., Chen, S., Dinneny, J. R., Doherty, C. J., Eveland, A. L., Friesner, J., Greenlee, V. R., Law, J. A., Marshall-Colón, A., Mason, G. A., O'Lexy, R., Peck, S. C., Schmitz, R. J., Song, L., Stern, D., Varagona, M. J., Walley, J. W. & Williams, C. M., Apr 2019, In : Plant Direct. 3, 4, e00133.

Research output: Contribution to journalArticle

Open Access

Dissecting the nonlinear response of maize yield to high temperature stress with model-data integration

Zhu, P., Zhuang, Q., Archontoulis, S. V., Bernacchi, C. & Müller, C., Jul 2019, In : Global change biology. 25, 7, p. 2470-2484 15 p.

Research output: Contribution to journalArticle

Distinct Substrate Transport Mechanism Identified in Homologous Sugar Transporters

Cheng, K. J., Selvam, B., Chen, L. Q. & Shukla, D., Oct 10 2019, In : Journal of Physical Chemistry B. 123, 40, p. 8411-8418 8 p.

Research output: Contribution to journalArticle

Domestic Affairs

Berenbaum, M., Sep 18 2019, In : American Entomologist. 65, 3, p. 154-157 4 p.

Research output: Contribution to journalArticle

Dynamic Controls on Field-Scale Soil Nitrous Oxide Hot Spots and Hot Moments Across a Microtopographic Gradient

Krichels, A. H. & Yang, W. H., Nov 1 2019, In : Journal of Geophysical Research: Biogeosciences. 124, 11, p. 3618-3634 17 p.

Research output: Contribution to journalArticle

Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons

Brewer, T. E., Aronson, E. L., Arogyaswamy, K., Billings, S. A., Botthoff, J. K., Campbell, A. N., Dove, N. C., Fairbanks, D., Gallery, R. E., Hart, S. C., Kaye, J., King, G., Logan, G., Lohse, K. A., Maltz, M. R., Mayorga, E., O'Neill, C., Owens, S. M., Packman, A., Pett-Ridge, J. & 5 others, Plante, A. F., Richter, D. D., Silver, W. L., Yang, W. H. & Fierer, N., Oct 1 2019, In : mBio. 10, 5, e01318-19.

Research output: Contribution to journalArticle

Open Access

Economical synthesis of 14C-labeled aminolevulinic acid for specific in situ labeling of plant tetrapyrroles

Schwarz, E. M. & Ort, D. R., Nov 1 2019, In : Photosynthesis research. 142, 2, p. 241-247 7 p.

Research output: Contribution to journalArticle

Effects of triclosan and triclocarban on denitrification and N2O emissions in paddy soil

Chen, S., Chee-Sanford, J. C., Yang, W. H., Sanford, R. A., Chen, J., Yan, X. & Shan, J., Dec 10 2019, In : Science of the Total Environment. 695, 133782.

Research output: Contribution to journalArticle

Open Access