Research Output 1969 2020

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Review article
2006

Cold War Cosmpolitanism: The Education of Santha Rama Rau in the Age of Bandung, 1945-1954

Burton, A., Mar 1 2006, In : Radical History Review. 95, p. 149-172 24 p.

Research output: Contribution to journalReview article

Cold War
Education
Cosmopolitanism

Directed evolution of enzymes and biosynthetic pathways

Johannes, T. W. & Zhao, H., Jun 1 2006, In : Current Opinion in Microbiology. 9, 3, p. 261-267 7 p.

Research output: Contribution to journalReview article

Biosynthetic Pathways
Enzymes
Phosphoric Triester Hydrolases
Epoxide Hydrolases
Metagenomics

Economics of fiber separation from distillers dried grains with solubles (DDGS) using sieving and elutriation

Srinivasan, R., Singh, V., Belyea, R. L., Rausch, K. D., Moreau, R. A. & Tumbleson, M. E., Jul 1 2006, In : Cereal Chemistry. 83, 4, p. 324-330 7 p.

Research output: Contribution to journalReview article

distillers grains
sieving
Economics
economics
Fibers

Efficient thermo-mechanical model for solidification processes

Koric, S. & Thomas, B. G., Jun 18 2006, In : International Journal for Numerical Methods in Engineering. 66, 12, p. 1955-1989 35 p.

Research output: Contribution to journalReview article

Continuous Casting
Solidification
Continuous casting
Newton-Raphson
Thermal Stress

Evolution of enzyme superfamilies

Glasner, M. E., Gerlt, J. A. & Babbitt, P. C., Oct 1 2006, In : Current Opinion in Chemical Biology. 10, 5, p. 492-497 6 p.

Research output: Contribution to journalReview article

Catalysis
Amidohydrolases
Molecular Sequence Annotation
Protein Engineering
Phosphopyruvate Hydratase

Exercise, cognition, and the aging brain

Kramer, A. F., Erickson, K. I. & Colcombe, S. J., Oct 9 2006, In : Journal of Applied Physiology. 101, 4, p. 1237-1242 6 p.

Research output: Contribution to journalReview article

Cognition
Brain
Exercise
Dementia
Epidemiologic Studies

First measurement of the clustering evolution of photometrically classified quasars

Myers, A. D., Brunner, R. J., Richards, G. T., Nichol, R. C., Schneider, D. P., Vanden Berk, D. E., Scranton, R., Gray, A. G. & Brinkmann, J., Feb 20 2006, In : Astrophysical Journal. 638, 2 I, p. 622-634 13 p.

Research output: Contribution to journalReview article

quasars
autocorrelation
luminosity
estimates
angular correlation

Fluorescent DNAzyme biosensors for metal ions based on catalytic molecular beacons.

Liu, J. & Lu, Y., 2006, In : Methods in molecular biology (Clifton, N.J.). 335, p. 275-288 14 p.

Research output: Contribution to journalReview article

Catalytic DNA
Biosensing Techniques
Metals
Ions
Fluorescence

From bedside to bench: does mental and physical activity promote cognitive vitality in late life?

Studenski, S., Carlson, M. C., Fillit, H., Greenough, W. T., Kramer, A. F. & Rebok, G. W., May 25 2006, In : Science of aging knowledge environment : SAGE KE. 2006, 10

Research output: Contribution to journalReview article

Exercise
National Institute on Aging (U.S.)
Cognitive Reserve
Socialization
Health

Functional DNA nanotechnology: emerging applications of DNAzymes and aptamers

Lu, Y. & Liu, J., Dec 1 2006, In : Current Opinion in Biotechnology. 17, 6, p. 580-588 9 p.

Research output: Contribution to journalReview article

Catalytic DNA
Nanotechnology
DNA
Nanostructures
Nanostructured materials

Heterologous expression and strategies for encapsulation of membrane-localized plant P450s

Duan, H. & Schuler, M. A., Jun 1 2006, In : Phytochemistry Reviews. 5, 2-3, p. 507-523 17 p.

Research output: Contribution to journalReview article

encapsulation
Membrane Proteins
membrane proteins
Plant Proteins
Membranes

High throughput assessment of cells and tissues: Bayesian classification of spectral metrics from infrared vibrational spectroscopic imaging data

Bhargava, R., Fernandez, D. C., Hewitt, S. M. & Levin, I. W., Jul 1 2006, In : Biochimica et Biophysica Acta - Biomembranes. 1758, 7, p. 830-845 16 p.

Research output: Contribution to journalReview article

Throughput
Tissue
Infrared radiation
Imaging techniques
Vibrational spectroscopy

Homology modeling of plant cytochrome P450s

Rupasinghe, S. & Schuler, M. A., Jun 1 2006, In : Phytochemistry Reviews. 5, 2-3, p. 473-505 33 p.

Research output: Contribution to journalReview article

Cytochromes
cytochromes
Mixed Function Oxygenases
Plant Proteins
structure-activity relationships

Introduction: The fate of nationalisms in the age of Bandung

Burton, A., Espiritu, A. & Wilkins, F. C., Mar 2006, In : Radical History Review. 95, p. 145-148 4 p.

Research output: Contribution to journalReview article

Fate

Lighting up the nascent cell wall.

van der Donk, W. A., Aug 22 2006, In : ACS chemical biology. 1, 7, p. 425-428 4 p.

Research output: Contribution to journalReview article

Lighting
Cell Wall
Cells
Peptidoglycan
Anti-Bacterial Agents

Metalloprotein and metallo-DNA/RNAzyme design: Current approaches, success measures, and future challenges

Lu, Y., Dec 11 2006, In : Inorganic Chemistry. 45, 25, p. 9930-9940 11 p.

Research output: Contribution to journalReview article

Metalloproteins
deoxyribonucleic acid
Metals
Binding Sites
DNA

Microplate-based, label-free detection of biomolecular interactions: Applications in proteomics

Cunningham, B. T. & Laing, L., Jul 7 2006, In : Expert Review of Proteomics. 3, 3, p. 271-281 11 p.

Research output: Contribution to journalReview article

Biosensing Techniques
Proteomics
Labels
Epitope Mapping
Biosensors

Mitotic chromosome structure and condensation

Belmont, A. S., Dec 1 2006, In : Current Opinion in Cell Biology. 18, 6, p. 632-638 7 p.

Research output: Contribution to journalReview article

Chromosome Structures
Chromosomes
Type II DNA Topoisomerase
Textbooks
Histones

Multi-fluorophore fluorescence resonance energy transfer for probing nucleic acids structure and folding.

Liu, J. & Lu, Y., 2006, In : Methods in molecular biology (Clifton, N.J.). 335, p. 257-271 15 p.

Research output: Contribution to journalReview article

Fluorescence Resonance Energy Transfer
Nucleic Acids
Catalytic DNA
DNA

Nanofluidics and the role of nanocapillary array membranes in mass-limited chemical analysis

Gatimu, E. N., Sweedler, J. V. & Bohn, P. W., Jun 8 2006, In : Analyst. 131, 6, p. 705-709 5 p.

Research output: Contribution to journalReview article

Nanofluidics
Microfluidics
chemical analysis
membrane
Membranes

Obtaining and screening compound collections: a user's guide and a call to chemists

Hergenrother, P., Jun 1 2006, In : Current Opinion in Chemical Biology. 10, 3, p. 213-218 6 p.

Research output: Contribution to journalReview article

Screening
Ligands
Throughput
Cytology
Proteomics

Perceived involvement of network members in courtships: A test of the relational turbulence model

Knobloch, L. & Donovan-Kicken, E., Sep 1 2006, In : Personal Relationships. 13, 3, p. 281-302 22 p.

Research output: Contribution to journalReview article

Courtship
Climate
Uncertainty
intimacy
Color

Population genomics in natural microbial communities

Whitaker, R. & Banfield, J. F., Sep 1 2006, In : Trends in Ecology and Evolution. 21, 9, p. 508-516 9 p.

Research output: Contribution to journalReview article

microbial communities
microbial community
genomics
genome
coexistence

PUB: Promise and Progress: Introduction

Sivapalan, M., Wagener, T., Uhlenbrook, S., Zehe, E., Lakshmi, V., Liang, X., Tachikawa, Y. & Kumar, P., Jul 14 2006, In : IAHS-AISH Publication. 303, p. 1-3 3 p.

Research output: Contribution to journalReview article

Recent advances in biocatalysis by directed enzyme evolution

Rubin-Pitel, S. B. & Zhao, H., May 1 2006, In : Combinatorial Chemistry and High Throughput Screening. 9, 4, p. 247-257 11 p.

Research output: Contribution to journalReview article

Biocatalysis
Enzymes
Biocatalysts
Catalyst selectivity
Bioelectric potentials

Relationship between malaria and filariasis transmission indices in an endemic area along the Kenyan Coast

Muturi, E., Mbogo, C. M., Ng'ang'a, Z. W., Kabiru, E. W., Mwandawiro, C., Novak, R. J. & Beier, J. C., Jun 1 2006, In : Journal of Vector Borne Diseases. 43, 2, p. 77-83 7 p.

Research output: Contribution to journalReview article

Anopheles gambiae
Filariasis
Filarial Elephantiasis
Malaria
Culicidae

Revision of the Neotropical treehopper genus Tolania (Hemiptera, Membracidae)

Albertson, J. L. & Dietrich, C. H., Dec 1 2006, In : Revista Brasileira de Zoologia. 23, 4, p. 915-993 79 p.

Research output: Contribution to journalReview article

Membracidae
Hemiptera
new species

Rings, radicals, and regeneration: The early years of a bioorganic laboratory

van der Donk, W. A., Dec 22 2006, In : Journal of Organic Chemistry. 71, 26, p. 9561-9571 11 p.

Research output: Contribution to journalReview article

Nisin
Fosfomycin
Biosynthesis
Anti-Bacterial Agents
lacticin 481

Scientific data collections and distributed collective practice

Cragin, M. H. & Shankar, K., Jun 2006, In : Computer Supported Cooperative Work. 15, 2-3, p. 185-204 20 p.

Research output: Contribution to journalReview article

Communication
Information management

Sensory acquisition in active sensing systems

Nelson, M. E. & MacIver, M. A., Jun 1 2006, In : Journal of Comparative Physiology A: Neuroethology, Sensory, Neural, and Behavioral Physiology. 192, 6, p. 573-586 14 p.

Research output: Contribution to journalReview article

probes (equipment)
probe
energy
Echolocation
Electric Fish

Shape-persistent macrocycles: Structures and synthetic approaches from arylene and ethynylene building blocks

Zhang, W. & Moore, J. S., Jul 3 2006, In : Angewandte Chemie - International Edition. 45, 27, p. 4416-4439 24 p.

Research output: Contribution to journalReview article

Supramolecular chemistry
Acetylene
Materials science
Oligomers
Molecules

Spatial heterogeneity and characteristic scales of species-habitat relationships

Schooley, R. L., Jun 1 2006, In : BioScience. 56, 6, p. 533-537 5 p.

Research output: Contribution to journalReview article

Ecosystem
habitats
Chelinidea vittiger
Netherlands
Cactaceae

Structural aspects of interactions within the Myc/Max/Mad network

Nair, S. K. & Burley, S. K., Feb 27 2006, In : Current Topics in Microbiology and Immunology. 302, p. 123-143 21 p.

Research output: Contribution to journalReview article

Nucleoproteins
DNA
Proteins

The 2dF-SDSS LRG and QSO (2SLAQ) luminous red galaxy survey

Cannon, R., Drinkwater, M., Edge, A., Eisenstein, D., Nichol, R., Outram, P., Pimbblet, K., De Propris, R., Roseboom, I., Wake, D., Allen, P., Bland-Hawthorn, J., Bridges, T., Carson, D., Chiu, K., Colless, M., Couch, W., Croom, S., Driver, S., Fine, S. & 12 others, Hewett, P., Loveday, J., Ross, N., Sadler, E. M., Shanks, T., Sharp, R., Smith, J. A., Stoughton, C., Weilbacher, P., Brunner, R. J., Meiksin, A. & Schneider, D. P., Oct 1 2006, In : Monthly Notices of the Royal Astronomical Society. 372, 1, p. 425-442 18 p.

Research output: Contribution to journalReview article

quasars
galaxies
cosmology
spatial distribution
resource

The chain-length dependence test

Stone, M. T., Heemstra, J. M. & Moore, J. S., Jan 1 2006, In : Accounts of chemical research. 39, 1, p. 11-20 10 p.

Research output: Contribution to journalReview article

Chain length
Conformations

The cognitive, emotional, and social sequelae of stroke: Psychological and ethical concerns in post-stroke adaptation

Mukherjee, D., Levin, R. L. & Heller, W., Sep 1 2006, In : Topics in Stroke Rehabilitation. 13, 4, p. 26-35 10 p.

Research output: Contribution to journalReview article

Social Isolation
Aptitude
Stroke
Psychology
Personality

The putative chemoreceptor families of C. elegans.

Robertson, H. M. & Thomas, J. H., 2006, In : WormBook : the online review of C. elegans biology. p. 1-12 12 p.

Research output: Contribution to journalReview article

Genes
Chromosomes
Pseudogenes
Soil
Genome

The role of molecular modeling in bionanotechnology

Lu, D., Aksimentiev, A., Shih, A. Y., Cruz-Chu, E., Freddolino, P. L., Arkhipov, A. & Schulten, K. J., Mar 1 2006, In : Physical Biology. 3, 1

Research output: Contribution to journalReview article

Nanotubes
Biopolymers
Silicon
Silicon Compounds
Nanopores
Cosmopolitanism
Heroine
Cold War
Geopolitics
Novel

Ultrasonic elasticity imaging as a tool for breast cancer diagnosis and research

Pellot-Barakat, C., Sridhar, M., Lindfors, K. K. & Insana, M. F., Feb 1 2006, In : Current Medical Imaging Reviews. 2, 1, p. 157-164 8 p.

Research output: Contribution to journalReview article

Elasticity
Ultrasonography
Breast Neoplasms
Research
Breast

β-sheet folding mechanisms from perturbation energetics

Deechongkit, S., Nguyen, H., Jager, M., Powers, E. T., Gruebele, M. & Kelly, J. W., Feb 1 2006, In : Current Opinion in Structural Biology. 16, 1, p. 94-101 8 p.

Research output: Contribution to journalReview article

Thermodynamics
Data Mining
Hydrogen Bonding
Hydrophobic and Hydrophilic Interactions
Amides
2005

Active galactic nuclei in the sloan digital sky survey. I. Sample selection

Hao, L., Strauss, M. A., Tremonti, C. A., Schlegel, D. J., Heckman, T. M., Kauffmann, G., Blanton, M. R., Fan, X., Gunn, J. E., Hall, P. B., Ivezić, Ž., Knapp, G. R., Krolik, J. H., Lupton, R. H., Richards, G. T., Schneider, D. P., Strateva, I. V., Zakamska, N. L., Brinkmann, J., Brunner, R. J. & 1 others, Szokoly, G. P., Apr 1 2005, In : Astronomical Journal. 129, 4, p. 1783-1794 12 p.

Research output: Contribution to journalReview article

active galactic nuclei
galaxies
diagram
diagrams
luminosity

An empirical calibration of the completeness of the SDSS quasar survey

Berk, D. E. V., Schneider, D. P., Richards, G. T., Hall, P. B., Strauss, M. A., Brunner, R., Fan, X., Baldry, I. K., York, D. G., Gunn, J. E., Nichol, R. C., Meiksin, A. & Brinkmann, J., May 1 2005, In : Astronomical Journal. 129, 5, p. 2047-2061 15 p.

Research output: Contribution to journalReview article

completeness
quasars
calibration
color
sky

An exercise in symbiosis: Undergraduate designers and a company product development team working together

Denton, H. & McDonagh, D. C., Nov 14 2005, In : Design Journal. 8, 1, p. 41-50 10 p.

Research output: Contribution to journalReview article

Product development
Students
Industry
Designer
Symbiosis

Bacterial mechanisms to overcome inhibitory effects of dietary tannins

Smith, A. H., Zoetendal, E. & Mackie, R. I., Aug 1 2005, In : Microbial Ecology. 50, 2, p. 197-205 9 p.

Research output: Contribution to journalReview article

tannin
tannins
bacterium
ruminant
bacteria

Beyond imagination: Perspective change problems revisited

Wang, R., Jan 1 2005, In : Psicologica. 26, 1, p. 25-38 14 p.

Research output: Contribution to journalReview article

Imagination
Target
Aptitude
Completion
Experiment

Beyond the gene chip

Heng, J. B., Aksimentiev, A., Ho, C., Dimitrov, V., Sorsch, T. W., Miner, J. F., Mansfield, W. M., Schulten, K. J. & Timp, G., Dec 1 2005, In : Bell System Technical Journal. 10, 3, p. 5-22 18 p.

Research output: Contribution to journalReview article

Capacitors
Genes
Nanotechnology
Molecular dynamics
DNA

Biological clocks coordinately keep life on time

Gillette, M. U. & Sejnowski, T. J., Aug 19 2005, In : Science. 309, 5738, p. 1196-1198 3 p.

Research output: Contribution to journalReview article

Physiological Feedback
biological rhythm
Genetic Transcription
Biological Clocks
Activity Cycles

Biosynthesis and mode of action of lantibiotics

Chatterjee, C., Paul, M., Xie, L. & van der Donk, W. A., Feb 1 2005, In : Chemical reviews. 105, 2, p. 633-683 51 p.

Research output: Contribution to journalReview article

Bacteriocins
Biosynthesis
Nisin
Bioactivity
Genes