Research Output 1967 2020

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Review article
2019

The development of the INFEWS-ER: A virtual resource center for transdisciplinary graduate student training at the nexus of food, energy, and water

Rodríguez, L. F., Marshall, A. M., Cotton, D., Koelsch, R., Koziel, J., Meyer, D., Steward, D., Heemstra, J., Padmanabahn, A., Classen, J., Meyer, N. J., Ruddell, B. L., Ryan, S. M., Cai, X., Habib, E. & Saundry, P. D., Jan 1 2019, In : Frontiers in Environmental Science. 7, APR, 38.

Research output: Contribution to journalReview article

Open Access
student
curriculum
food
resource
energy

The epigenetic impacts of endocrine disruptors on female reproduction across generations

Rattan, S. & Flaws, J. A., Sep 1 2019, In : Biology of reproduction. 101, 3, p. 635-644 10 p.

Research output: Contribution to journalReview article

Open Access
Endocrine Disruptors
Epigenomics
Reproduction
Social Responsibility
Hormones

The P3b and P600(s): Positive contributions to language comprehension

Leckey, M. & Federmeier, K. D., Jan 1 2019, In : Psychophysiology. e13351.

Research output: Contribution to journalReview article

Semantics
Language
Research
Parents
Students
Communication
Special Education
Autism Spectrum Disorder

The role of cognitive control in tinnitus and its relation to speech-in-noise performance

Tai, Y. & Husain, F. T., Jan 1 2019, In : Journal of Audiology and Otology. 23, 1, p. 1-7 7 p.

Research output: Contribution to journalReview article

Tinnitus
Noise
Hearing
Hearing Loss
Neuroimaging

The Sloan Digital Sky Survey Reverberation Mapping Project: Systematic Investigations of Short-timescale C IV Broad Absorption Line Variability

Hemler, Z. S., Grier, C. J., Brandt, W. N., Hall, P. B., Horne, K., Shen, Y., Trump, J. R., Schneider, D. P., Vivek, M., Bizyaev, D., Oravetz, A., Oravetz, D. & Pan, K., Feb 10 2019, In : Astrophysical Journal. 872, 1, 21.

Research output: Contribution to journalReview article

reverberation
quasars
timescale
time measurement
ionization

Towards a cohesive strategy for the conservation of the United States’ diverse and highly endemic crayfish fauna

Taylor, C. A., DiStefano, R. J., Larson, E. R. & Stoeckel, J., Dec 1 2019, In : Hydrobiologia. 846, 1, p. 39-58 20 p.

Research output: Contribution to journalReview article

crayfish
fauna
outreach
funding
freshwater ecosystem

Toward unsettling histories of domesticity

Burton, A., Jan 1 2019, In : American Historical Review. 124, 4, p. 1332-1336 5 p.

Research output: Contribution to journalReview article

Transgenerational effects of endocrine-disrupting chemicals on Male and female reproduction

Brehm, E. & Flaws, J. A., Jun 1 2019, In : Endocrinology. 160, 6, p. 1421-1435 15 p.

Research output: Contribution to journalReview article

Open Access
Endocrine Disruptors
Reproduction
Pesticides
Dioxins
Polychlorinated Biphenyls

Transgenerational Plasticity in Human-Altered Environments

Donelan, S. C., Hellmann, J. K., Bell, A. M., Luttbeg, B., Orrock, J. L., Sheriff, M. J. & Sih, A., Jan 1 2019, (Accepted/In press) In : Trends in Ecology and Evolution. 35, 2, p. 115-124 10 p.

Research output: Contribution to journalReview article

plasticity
environmental change
fitness
phenotype
environmental conditions

Translating human cancer sequences into personalized porcine cancer models

Xu, C., Wu, S., Schook, L. B. & Schachtschneider, K. M., Jan 1 2019, In : Frontiers in Oncology. 9, FEB, 00105.

Research output: Contribution to journalReview article

Open Access
Swine
Neoplasms
Precision Medicine
Mutation
Technology

Tuning the blueprint: how studies of implicit learning during speaking reveal the information processing components of the production system

Dell, G. S., Kelley, A. C., Bian, Y. & Holmes, E. W., Oct 21 2019, In : Language, Cognition and Neuroscience. 34, 9, p. 1246-1256 11 p.

Research output: Contribution to journalReview article

Aptitude
Automatic Data Processing
information processing
speaking
Learning
Fluorescence microscopy
Fluorescence Microscopy
Epigenomics
Molecules
Gene expression

Viewpoint from computational thinking to computational action

Tissenbaum, M. B., Sheldon, J. & Abelson, H., Mar 2019, In : Communications of the ACM. 62, 3, p. 34-36 3 p.

Research output: Contribution to journalReview article

Education computing

Visual hallucinations, thalamocortical physiology and Lewy body disease: A review

Esmaeeli, S., Murphy, K., Swords, G. M., Ibrahim, B. A., Brown, J. W. & Llano, D. A., Aug 2019, In : Neuroscience and Biobehavioral Reviews. 103, p. 337-351 15 p.

Research output: Contribution to journalReview article

Lewy Body Disease
Hallucinations
Thalamic Nuclei
Thalamus
Arousal

Water Use Efficiency as a Constraint and Target for Improving the Resilience and Productivity of C 3 and C 4 Crops

Leakey, A., Ferguson, J. N., Pignon, C. P., Wu, A., Jin, Z., Hammer, G. L. & Lobell, D. B., Apr 2019, In : Annual Review of Plant Biology. 70, p. 781-808 28 p.

Research output: Contribution to journalReview article

water use efficiency
Water
crops
Photosynthesis
photosynthesis
Open Access
Metallic Glasses
Intuition
Earthquakes
Earth crust
Granular Materials
2018

3D printing for preoperative planning and surgical training: a review

Ganguli, A., Pagan-Diaz, G. J., Grant, L., Cvetkovic, C., Bramlet, M., Vozenilek, J. A., Kesavadas, T. & Bashir, R., Sep 1 2018, In : Biomedical microdevices. 20, 3, 65.

Research output: Contribution to journalReview article

Printing
Audiovisual Aids
Planning
Diagnostic Imaging
Human Body

65% of Americans believe they are above average in intelligence: Results of two nationally representative surveys

Heck, P. R., Simons, D. J. & Chabris, C. F., Jul 2018, In : PloS one. 13, 7, e0200103.

Research output: Contribution to journalReview article

Intelligence
Psychology
census data
Aptitude
psychology

Advancements in continuous approximation models for logistics and transportation systems: 1996–2016

Ansari, S., Başdere, M., Li, X., Ouyang, Y. & Smilowitz, K., Jan 2018, In : Transportation Research Part B: Methodological. 107, p. 229-252 24 p.

Research output: Contribution to journalReview article

transportation system
Logistics
logistics
Supply chain management
supply

Advances in synthesis of biotin and assembly of lipoic acid

Cronan, J. E., Dec 2018, In : Current Opinion in Chemical Biology. 47, p. 60-66 7 p.

Research output: Contribution to journalReview article

Thioctic Acid
Biotin
Methylation
Metabolism
Escherichia coli

Advancing Metabolic Engineering of Saccharomyces cerevisiae Using the CRISPR/Cas System

Lian, J., HamediRad, M. & Zhao, H., Sep 2018, In : Biotechnology Journal. 13, 9, 1700601.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Metabolic Engineering
Saccharomyces cerevisiae
Gene Knockout Techniques
Biotechnology

A framework for enhancing ethical genomic research with Indigenous communities

Summer internship for INdigenous peoples in Genomics (SING) Consortium, Dec 1 2018, In : Nature communications. 9, 1, 2957.

Research output: Contribution to journalReview article

health
Research
inclusions
magnetic permeability
Health

Alley cropping: Global patterns of species composition and function

Wolz, K. J. & Delucia, E. H., Jan 15 2018, In : Agriculture, Ecosystems and Environment. 252, p. 61-68 8 p.

Research output: Contribution to journalReview article

alley cropping
species diversity
crop
crops
fodder

A new era for electron bifurcation

Peters, J. W., Beratan, D. N., Bothner, B., Dyer, R. B., Harwood, C. S., Heiden, Z. M., Hille, R., Jones, A. K., King, P. W., Lu, Y., Lubner, C. E., Minteer, S. D., Mulder, D. W., Raugei, S., Schut, G. J., Seefeldt, L. C., Tokmina-Lukaszewska, M., Zadvornyy, O. A., Zhang, P. & Adams, M. WW., Dec 2018, In : Current Opinion in Chemical Biology. 47, p. 32-38 7 p.

Research output: Contribution to journalReview article

Electrons
Biochemical Phenomena
Anaerobiosis
Electron Transport Complex III
Redox reactions

A new perspective of the hippocampus in the origin of exercise–brain interactions

Rendeiro, C. & Rhodes, J. S., Jul 1 2018, In : Brain Structure and Function. 223, 6, p. 2527-2545 19 p.

Research output: Contribution to journalReview article

Hippocampus
Exercise
Brain
Neuronal Plasticity
Neurogenesis

Applications of power ultrasound in oriented modification and degradation of pectin: A review

Wang, W., Chen, W., Zou, M., Lv, R., Wang, D., Hou, F., Feng, H., Ma, X., Zhong, J., Ding, T., Ye, X. & Liu, D., Oct 2018, In : Journal of Food Engineering. 234, p. 98-107 10 p.

Research output: Contribution to journalReview article

pectins
degradation
Technology
sustainable technology
functional properties

Approaches and challenges to the study of loess - Introduction to the LoessFest Special Issue

Schaetzl, R. J., Bettis, E. A., Crouvi, O., Fitzsimmons, K. E., Grimley, D. A., Hambach, U., Lehmkuhl, F., Marković, S. B., Mason, J. A., Owczarek, P., Roberts, H. M., Rousseau, D. D., Stevens, T., Vandenberghe, J., Zárate, M., Veres, D., Yang, S., Zech, M., Conroy, J. L., Dave, A. K. & 8 others, Faust, D., Hao, Q., Obreht, I., Prud'Homme, C., Smalley, I., Tripaldi, A., Zeeden, C. & Zech, R., May 1 2018, In : Quaternary Research (United States). 89, 3, p. 563-618 56 p.

Research output: Contribution to journalReview article

loess
student
Loess

Archaea-First and the Co-Evolutionary Diversification of Domains of Life

Staley, J. T. & Caetano-Anolles, G., Aug 2018, In : BioEssays. 40, 8, 1800036.

Research output: Contribution to journalReview article

Archaea
Bacteria
Cells
Eukaryota
Methane

A review of data-driven building energy consumption prediction studies

Amasyali, K. & El-Gohary, N., Jan 1 2018, In : Renewable and Sustainable Energy Reviews. 81, p. 1192-1205 14 p.

Research output: Contribution to journalReview article

Energy utilization
Learning algorithms
Learning systems
Conservation
Planning

aTRAM 2.0: An Improved, Flexible Locus Assembler for NGS Data

Allen, J. M., LaFrance, R., Folk, R. A., Johnson, K. P. & Guralnick, R. P., 2018, In : Evolutionary Bioinformatics. 14, 4 p.

Research output: Contribution to journalReview article

Workflow
Genes
Genome
loci
genome

Attitudes and Attitude Change

Albarracin, D. & Shavitt, S., Jan 4 2018, In : Annual review of psychology. 69, p. 299-327 29 p.

Research output: Contribution to journalReview article

Social Media
Language Development
Human Development
Research
Emotions

Auditory system dysfunction in Alzheimer disease and its prodromal states: A review

Swords, G. M., Nguyen, L. T., Mudar, R. & Llano, D. A., Jul 2018, In : Ageing Research Reviews. 44, p. 49-59 11 p.

Research output: Contribution to journalReview article

Prodromal Symptoms
Alzheimer Disease
Central Auditory Diseases
Quality of Life
Pure-Tone Audiometry

Avian prenatal auditory stimulation: progress and perspectives

Rivera, M., Louder, M. I. M., Kleindorfer, S., Liu, W. C. & Hauber, M. E., Jul 1 2018, In : Behavioral Ecology and Sociobiology. 72, 7, 112.

Research output: Contribution to journalReview article

acoustics
embryo
embryo (animal)
bird
birds

Beast of America: Sovereignty and the wildness of objects

Byrd, J. A., Jul 2018, In : South Atlantic Quarterly. 117, 3, p. 599-615 17 p.

Research output: Contribution to journalReview article

sovereignty
Beast
Sovereignty
Wildness

Biocatalysis for the synthesis of pharmaceuticals and pharmaceutical intermediates

Sun, H., Zhang, H., Ang, E. L. & Zhao, H., Apr 1 2018, In : Bioorganic and Medicinal Chemistry. 26, 7, p. 1275-1284 10 p.

Research output: Contribution to journalReview article

Biocatalysis
Enzymes
Pharmaceutical Preparations
Oxidoreductases
Protein Engineering

Bioengineered Liver Models for Drug Testing and Cell Differentiation Studies

Underhill, G. H. & Khetani, S. R., Mar 2018, In : CMGH. 5, 3, p. 426-439.e1

Research output: Contribution to journalReview article

Cell Differentiation
Liver
Pharmaceutical Preparations
Hepatocytes
Cell- and Tissue-Based Therapy

Biological consequences of weak acidification caused by elevated carbon dioxide in freshwater ecosystems

Hasler, C. T., Jeffrey, J. D., Schneider, E. V. C., Hannan, K. D., Tix, J. A. & Suski, C. D., Jan 1 2018, In : Hydrobiologia. 806, 1

Research output: Contribution to journalReview article

freshwater ecosystem
acidification
carbon dioxide
biota
ecosystems

Biomass and biofuels in China: Toward bioenergy resource potentials and their impacts on the environment

Qin, Z., Zhuang, Q., Cai, X., He, Y., Huang, Y., Jiang, D., Lin, E., Liu, Y., Tang, Y. & Wang, M. Q., Feb 2018, In : Renewable and Sustainable Energy Reviews. 82, p. 2387-2400 14 p.

Research output: Contribution to journalReview article

Biofuels
Crops
Biomass
Ecosystems
Ethanol

Biophysics of Tumor Microenvironment and Cancer Metastasis - A Mini Review

Emon, B., Bauer, J., Jain, Y., Jung, B. & Saif, M. T. A., Jan 1 2018, In : Computational and Structural Biotechnology Journal. 16, p. 279-287 9 p.

Research output: Contribution to journalReview article

Biophysics
Tumor Microenvironment
Tumors
Cells
Neoplasm Metastasis

Bone regeneration strategies: Engineered scaffolds, bioactive molecules and stem cells current stage and future perspectives

Ho-Shui-Ling, A., Bolander, J., Rustom, L. E., Johnson, A. W., Luyten, F. P. & Picart, C., Oct 2018, In : Biomaterials. 180, p. 143-162 20 p.

Research output: Contribution to journalReview article

Bone Substitutes
Bone Regeneration
Stem cells
Scaffolds
Bone

Breaking the Axial Diffraction Limit: A Guide to Axial Super-Resolution Fluorescence Microscopy

Liu, W., Toussaint, K. C., Okoro, C., Zhu, D., Chen, Y., Kuang, C. & Liu, X., Aug 2018, In : Laser and Photonics Reviews. 12, 8, 1700333.

Research output: Contribution to journalReview article

Fluorescence microscopy
Diffraction
microscopy
fluorescence
diffraction

CAMP, Ca2+, pHi, and NO Regulate H-like Cation Channels That Underlie Feeding and Locomotion in the Predatory Sea Slug Pleurobranchaea californica

Green, D. J., Huang, R. C., Sudlow, L., Hatcher, N., Potgieter, K., McCrohan, C., Lee, C., Romanova, E. V., Sweedler, J. V., Gillette, M. L. & Gillette, R., Aug 15 2018, In : ACS Chemical Neuroscience. 9, 8, p. 1986-1993 8 p.

Research output: Contribution to journalReview article

Pleurobranchaea
Gastropoda
Locomotion
Nitric Oxide Synthase
Oceans and Seas

Causes and Consequences of Spatial Within-Host Viral Spread

Gallagher, M. E., Brooke, C. B., Ke, R. & Koelle, K., Nov 13 2018, In : Viruses. 10, 11

Research output: Contribution to journalReview article

Influenza A virus
Population Genetics
Population Dynamics
Virion
Respiratory System
Cell adhesion
Cell Adhesion
Epithelial Cells
Adhesion
Epithelium

Cell-Extracellular Matrix Mechanobiology: Forceful Tools and Emerging Needs for Basic and Translational Research

Holle, A. W., Young, J. L., Van Vliet, K. J., Kamm, R. D., Discher, D., Janmey, P., Spatz, J. P. & Saif, T., Jan 10 2018, In : Unknown Journal. 18, 1, p. 1-8 8 p.

Research output: Contribution to journalReview article

emerging
Mechanics
cues
Signal transduction
Neurology

Circadian redox rhythms in the regulation of neuronal excitability

Bothwell, M. Y. & Gillette, M. L., May 1 2018, In : Free Radical Biology and Medicine. 119, p. 45-55 11 p.

Research output: Contribution to journalReview article

Circadian Rhythm
Oxidation-Reduction
Suprachiasmatic Nucleus
Membranes
Ion Channels

Complex integration of intrinsic and peripheral signaling is required for pituitary gland development

Edwards, W. & Raetzman, L. T., Sep 1 2018, In : Biology of reproduction. 99, 3, p. 504-513 10 p.

Research output: Contribution to journalReview article

Pituitary Gland
Endocrine Cells
Stem Cells
Research
Pituitary Diseases

Conceptualization of a US Research Software Sustainability Institute (URSSI)

Carver, J. C., Gesing, S., Katz, D. S., Ram, K. & Weber, N., May 1 2018, In : Computing in Science and Engineering. 20, 3, p. 4-9 6 p.

Research output: Contribution to journalReview article

Sustainable development
Engineering research
Software engineering

Consensus, uncertainties and challenges for perennial bioenergy crops and land use

Whitaker, J., Field, J. L., Bernacchi, C. J., Cerri, C. E. P., Ceulemans, R., Davies, C. A., DeLucia, E. H., Donnison, I. S., McCalmont, J. P., Paustian, K., Rowe, R. L., Smith, P., Thornley, P. & McNamara, N. P., Mar 2018, In : GCB Bioenergy. 10, 3, p. 150-164 15 p.

Research output: Contribution to journalReview article

energy crops
bioenergy
Land use
Crops
Greenhouse gases