Research Output 1969 2020

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Review article
2014

Quantum Monte Carlo for Ab Initio calculations of energy-relevant materials

Wagner, L. K., Jan 15 2014, In : International Journal of Quantum Chemistry. 114, 2, p. 94-101 8 p.

Research output: Contribution to journalReview article

Monte Carlo method
density functional theory
Density functional theory
fossil fuels
Monte Carlo methods
Biosynthesis
Metabolites
Fatty acids
Yeast
Saccharomyces cerevisiae

Recent advances in natural product discovery

Luo, Y., Cobb, R. E. & Zhao, H., Dec 1 2014, In : Current Opinion in Biotechnology. 30, p. 230-237 8 p.

Research output: Contribution to journalReview article

Biological Products
Bioinformatics
Genomics
Drug products
Screening

Recent advances in solid-state nuclear magnetic resonance techniques to quantify biomolecular dynamics

Watt, E. D. & Rienstra, C. M., Jan 7 2014, In : Analytical chemistry. 86, 1, p. 58-64 7 p.

Research output: Contribution to journalReview article

Membrane Proteins
Animals
Nuclear magnetic resonance

Reconstructing disturbances and their biogeochemical consequences over multiple timescales

McLauchlan, K. K., Higuera, P. E., Gavin, D. G., Perakis, S. S., Mack, M. C., Alexander, H., Battles, J., Biondi, F., Buma, B., Colombaroli, D., Enders, S. K., Engstrom, D. R., Hu, F. S., Marlon, J. R., Marshall, J., McGlone, M., Morris, J. L., Nave, L. E., Shuman, B., Smithwick, E. A. H. & 4 others, Urrego, D. H., Wardle, D. A., Williams, C. J. & Williams, J. J., Jan 1 2014, In : BioScience. 64, 2, p. 105-116 12 p.

Research output: Contribution to journalReview article

Ecosystem
ecosystems
chronosequences
long term experiments
ecologists

Review of the neotropical genus Prasmodon (Hymenoptera, Braconidae, Microgastrinae), with emphasis on species from Area de Conservación Guanacaste, northwestern Costa Rica

Fernandez-Triana, J. L., Whitfield, J. B., Smith, M. A., Braet, Y., Hallwachs, W. & Janzen, D. H., 2014, In : Journal of Hymenoptera Research. 37, p. 1-52 52 p.

Research output: Contribution to journalReview article

Elachistidae
leaf rolling
Crambidae
caterpillar
Braconidae

Rocky desertification in Southwest China: Impacts, causes, and restoration

Jiang, Z., Lian, Y. & Qin, X., May 1 2014, In : Earth-Science Reviews. 132, p. 1-12 12 p.

Research output: Contribution to journalReview article

desertification
karst
human activity
reforestation
economic conditions

Role of calmodulin in neuronal Kv7/KCNQ potassium channels and epilepsy

Chung, H. J., Jun 1 2014, In : Frontiers in Biology. 9, 3, p. 205-215 11 p.

Research output: Contribution to journalReview article

KCNQ Potassium Channels
epilepsy
potassium channels
calmodulin
Calmodulin

Role of uterine stromal-epithelial crosstalk in embryo implantation

Hantak, A. M., Bagchi, I. C. & Bagchi, M. K., Jan 1 2014, In : International Journal of Developmental Biology. 58, 2-4, p. 139-146 8 p.

Research output: Contribution to journalReview article

Embryonic Structures
Steroids
Hormones
Decidua
Pregnancy

Sex determination in flowering plants: Papaya as a model system

Aryal, R. & Ming, R. R., Mar 1 2014, In : Plant Science. 217-218, p. 56-62 7 p.

Research output: Contribution to journalReview article

Carica
papayas
Angiospermae
Sex Chromosomes
gender

Small-Volume Analysis of Cell-Cell Signaling Molecules in the Brain

Romanova, E. V., Aerts, J. T., Croushore, C. A. & Sweedler, J. V., Jan 1 2014, In : Neuropsychopharmacology. 39, 1, p. 50-64 15 p.

Research output: Contribution to journalReview article

Cell Size
Brain
Research
Nervous System
Technology

Smart chemistry in polymeric nanomedicine

Tong, R., Tang, L., Ma, L., Tu, C., Baumgartner, R. & Cheng, J., Oct 21 2014, In : Chemical Society Reviews. 43, 20, p. 6982-7012 31 p.

Research output: Contribution to journalReview article

Medical nanotechnology
Drug delivery
Pharmaceutical Preparations
Polymers
Tissue

Soluble T cell receptor Vβ domains engineered for high-affinity binding to staphylococcal or streptococcal superantigens

Sharma, P., Wang, N. & Kranz, D. M., Feb 13 2014, In : Toxins. 6, 2, p. 556-574 19 p.

Research output: Contribution to journalReview article

Superantigens
T-Cell Antigen Receptor
T-cells
T-Lymphocytes
Staphylococcus aureus

Special issue: SC13-The international conference for high performance computing, networking, storage and analysis

Gropp, W. D. & Matsuoka, S., 2014, In : Scientific Programming. 22, 2, p. 57-58 2 p.

Research output: Contribution to journalReview article

Structure and mechanism of lanthipeptide biosynthetic enzymes

van der Donk, W. A. & Nair, S. K., Dec 1 2014, In : Current Opinion in Structural Biology. 29, p. 58-66 9 p.

Research output: Contribution to journalReview article

Peptides
Sulfides
Enzymes
Post Translational Protein Processing
Biological Products

Tensegrity, cellular biophysics, and the mechanics of living systems

Ingber, D. E., Wang, N. & Stamenović, D., Apr 2014, In : Reports on Progress in Physics. 77, 4, 046603.

Research output: Contribution to journalReview article

biophysics
integrity
biology
cells
speed regulators

The auditory corticocollicular system: Molecular and circuit-level considerations

Stebbings, K. A., Lesicko, A. M. H. & Llano, D. A., Aug 2014, In : Hearing Research. 314, p. 51-59 9 p.

Research output: Contribution to journalReview article

Inferior Colliculi
Auditory Pathways
Aptitude
Complex Mixtures
Acoustics

The biophysical link between climate, water, and vegetation in bioenergy agro-ecosystems

Bagley, J. E., Davis, S. C., Georgescu, M., Hussain, M. Z., Miller, J., Nesbitt, S., VanLoocke, A. & Bernacchi, C., Dec 1 2014, In : Biomass and Bioenergy. 71, p. 187-201 15 p.

Research output: Contribution to journalReview article

bioenergy
Gas emissions
Greenhouse gases
Land use
Ecosystems

The chain-flipping mechanism of ACP (acyl carrier protein)-dependent enzymes appears universal

Cronan, J. E., Jun 1 2014, In : Biochemical Journal. 460, 2, p. 157-163 7 p.

Research output: Contribution to journalReview article

Acyl Carrier Protein
Enzymes
Fatty Acids
Polyketides
Proteins

The evolution and functional morphology of trap-jaw ants (Hymenoptera: Formicidae)

Larabee, F. J. & Suarez, A. V., Jan 1 2014, In : Myrmecological News. 20, p. 25-36 12 p.

Research output: Contribution to journalReview article

jaws
Formicidae
traps
Hymenoptera
mandible (bone)

The more exotic shapes of semiconductor nanocrystals: Emerging applications in bioimaging

Lim, S. J., Smith, A. & Nie, S., May 2014, In : Current Opinion in Chemical Engineering. 4, p. 137-143 7 p.

Research output: Contribution to journalReview article

Nanocrystals
Semiconductor materials
Imaging techniques
Light emission
Physiology
language development
Language
prediction
Psycholinguistics
Social Adjustment
calderas
caldera
magma chamber
magma
volcanic eruption

The role of the hippocampus in flexible cognition and social behavior

Rubin, R. D., Watson, P. D., Duff, M. C. & Cohen, N. J., Jan 1 2014, In : Frontiers in Human Neuroscience. 8, SEP, 742.

Research output: Contribution to journalReview article

Social Behavior
Cognition
Hippocampus
Frontal Lobe
Imagination
Biosynthetic Pathways
Sulfur
Thioctic Acid
Fatty Acid Synthases
Enzymes

The swarm at the edge of the cloud

Lee, E. A., Rabaey, J., Hartmann, B., Kubiatowicz, J., Pister, K., Simunic Rosing, T., Wawrzynek, J., Wessel, D., Sangiovanni-Vincentelli, A., Seshia, S. A., Blaauw, D., Dutta, P., Fu, K., Guestrin, C., Taskar, B., Jafari, R., Jones, D. L., Kumar, V., Mangharam, R., Pappas, G. J. & 2 others, Murray, R. M. & Rowe, A., Jun 2014, In : IEEE Design and Test. 31, 3, p. 8-20 13 p., 6781658.

Research output: Contribution to journalReview article

Smartphones
Information use
Telecommunication networks
Sensors

Toward a drug development path that targets metastatic progression in osteosarcoma

Khanna, C., Fan, T. M., Gorlick, R., Helman, L. J., Kleinerman, E. S., Adamson, P. C., Houghton, P. J., Tap, W. D., Welch, D. R., Steeg, P. S., Merlino, G., Sorensen, P. H. B., Meltzer, P., Kirsch, D. G., Janeway, K. A., Weigel, B., Randall, L., Withrow, S. J., Paoloni, M., Kaplan, R. & 12 others, Teicher, B. A., Seibel, N. L., Smith, M., Üren, A., Patel, S. R., Trent, J., Savage, S. A., Mirabello, L., Reinke, D., Barkaukas, D. A., Krailo, M. & Bernstein, M., Aug 15 2014, In : Clinical Cancer Research. 20, 16, p. 4200-4209 10 p.

Research output: Contribution to journalReview article

Osteosarcoma
Neoplasm Metastasis
Pharmaceutical Preparations
Expert Testimony
Neoplasms
Ubiquitination
Proteasome Endopeptidase Complex
Ubiquitin
Synapses
Proteolysis

Using resting state functional connectivity to unravel networks of tinnitus

Husain, F. T. & Schmidt, S. A., Jan 1 2014, In : Hearing Research. 307, p. 153-162 10 p.

Research output: Contribution to journalReview article

Tinnitus
Brain
Nervous System Diseases
Hearing Loss
Neuroimaging

Utilization and control of bioactuators across multiple length scales

Chan, V., Asada, H. H. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 653-670 18 p.

Research output: Contribution to journalReview article

Tissue
Muscle
Cells
Protozoa
Kinesin
2013

Adiponectin to the rescue: How the embryo maintains glucose uptake in a diabetic mother

Nowak, R. A., Jul 1 2013, In : Endocrinology. 154, 7, p. 2260-2262 3 p.

Research output: Contribution to journalReview article

Biological Transport
Adiponectin
Diabetes Mellitus
Embryonic Structures
Glucose

Altered dynamics of forest recovery under a changing climate

Anderson-Teixeira, K. J., Miller, A. D., Mohan, J. E., Hudiburg, T. W., Duval, B. D. & DeLucia, E. H., Jul 1 2013, In : Global change biology. 19, 7, p. 2001-2021 21 p.

Research output: Contribution to journalReview article

Recovery
Climate change
Ecosystems
climate
Feedback

Alternative dietary fiber sources in companion animal nutrition

Cattai de Godoy, M. R., Kerr, K. R. & Fahey, G. C., Aug 6 2013, In : Nutrients. 5, 8, p. 3099-3117 19 p.

Research output: Contribution to journalReview article

animal nutrition
Pets
Dietary Fiber
pets
dietary fiber
Orthoptera
Insecta
subspecies
gender
material

An emerging understanding of mechanisms governing insect herbivory under elevated CO2

Zavala, J. A., Nabity, P. D. & DeLucia, E. H., Jan 7 2013, In : Annual Review of Entomology. 58, p. 79-97 19 p.

Research output: Contribution to journalReview article

herbivory
herbivores
insect
insects
chemistry

An overview of lignocellulosic biomass feedstock harvest, processing and supply for biofuel production

Miao, Z., Grift, T. E., Hansen, A. C. & Ting, K. C., Jan 1 2013, In : Biofuels. 4, 1, p. 5-8 4 p.

Research output: Contribution to journalReview article

Biofuels
biofuel
Feedstocks
Biomass
biomass

A review of microbial redox interactions with structural Fe in clay minerals

Pentráková, L., Su, K., Pentrák, M. & Stucki, J. W., Jun 1 2013, In : Clay Minerals. 48, 3, p. 543-560 18 p.

Research output: Contribution to journalReview article

Clay minerals
clay mineral
Microorganisms
smectite
Chemical properties

A review of the Nearctic genus Zealeuctra Ricker (Plecoptera, Leuctridae), with the description of a new species from the Cumberland Plateau region of eastern North America

Grubbs, S. A., Kondratief, B. C., Stark, B. P. & Dewalt, R. E., Jan 1 2013, In : ZooKeys. 344, p. 17-47 31 p.

Research output: Contribution to journalReview article

Leuctridae
Plecoptera
plateaus
plateau
new species

Attention: A key to collaboration between health providers and older adult patients

Morrow, D. G., Feb 1 2013, In : Aging Health. 9, 1, p. 1-4 4 p.

Research output: Contribution to journalReview article

Patient-Centered Care
Health

Bridging animal and human models of exercise-induced brain plasticity

Voss, M. W., Vivar, C., Kramer, A. F. & van Praag, H., Oct 1 2013, In : Trends in Cognitive Sciences. 17, 10, p. 525-544 20 p.

Research output: Contribution to journalReview article

Animal Models
Brain
Neurogenesis
Nerve Growth Factors
Cognition

Carbon partitioning in sugarcane (Saccharum species)

Wang, J., Nayak, S., Koch, K. & Ming, R., Jun 18 2013, In : Frontiers in Plant Science. 4, JUN, 201.

Research output: Contribution to journalReview article

Saccharum
sugarcane
sucrose
carbon
cell walls

Cascading and feedback in interactive models of production: A reflection of forward modeling?

Dell, G. S., Aug 2013, In : Behavioral and Brain Sciences. 36, 4, p. 351-352 2 p.

Research output: Contribution to journalReview article

Language
activation
language
Direction compound
Modeling

Cation exchange on the nanoscale: An emerging technique for new material synthesis, device fabrication, and chemical sensing

Rivest, J. B. & Jain, P., Jan 7 2013, In : Chemical Society Reviews. 42, 1, p. 89-96 8 p.

Research output: Contribution to journalReview article

Cations
Fabrication
Nanocrystals
Ion exchange
Chemical analysis

Combinatorial genetic perturbation to refine metabolic circuits for producing biofuels and biochemicals

Kim, H. J., Turner, T. L. & Jin, Y. S., Nov 1 2013, In : Biotechnology Advances. 31, 6, p. 976-985 10 p.

Research output: Contribution to journalReview article

Metabolic engineering
Biofuels
Metabolic Engineering
Phenotype
Networks (circuits)
continuum flow
fluid flow
Porous Media
Fluid Flow
Fractal

Competition explains limited attention and perceptual resources: Implications for perceptual load and dilution theories

Scalf, P. E., Torralbo, A., Tapia, E. & Beck, D. M., Jun 27 2013, In : Frontiers in Psychology. 4, MAY, Article 243.

Research output: Contribution to journalReview article

Brain

Computational solutions for omics data

Berger, B., Peng, J. & Singh, M., May 1 2013, In : Nature Reviews Genetics. 14, 5, p. 333-346 14 p.

Research output: Contribution to journalReview article

Sequence Analysis
Software
Technology
Datasets

Correlated imaging-a grand challenge in chemical analysis

Masyuko, R., Lanni, E. J., Sweedler, J. V. & Bohn, P. W., Apr 7 2013, In : Analyst. 138, 7, p. 1924-1939 16 p.

Research output: Contribution to journalReview article

chemical analysis
Imaging techniques
Chemical analysis
experiment
Experiments

Deeply-cooled water under strong confinement: Neutron scattering investigations and the liquid-liquid critical point hypothesis

Bertrand, C. E., Zhang, Y. & Chen, S. H., Jan 21 2013, In : Physical Chemistry Chemical Physics. 15, 3, p. 721-745 25 p.

Research output: Contribution to journalReview article

Neutron scattering
critical point
neutron scattering
Water
Liquids

Directed evolution as a powerful synthetic biology tool

Cobb, R. E., Sun, N. & Zhao, H., Mar 15 2013, In : Methods. 60, 1, p. 81-90 10 p.

Research output: Contribution to journalReview article

Synthetic Biology
Biological systems
Environmental Biodegradation
Biofuels
Bioremediation