Research Output 1967 2020

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Review article
Review article

Quantitative phase imaging in biomedicine

Park, Y. K., Depeursinge, C. & Popescu, G., Oct 1 2018, In : Nature Photonics. 12, 10, p. 578-589 12 p.

Research output: Contribution to journalReview article

Imaging techniques
commercialization
optical paths
microscopy
Photobleaching

Quantum-classical path integral: A rigorous approach to condensed phase dynamics

Makri, N., Sep 1 2015, In : International Journal of Quantum Chemistry. 115, 18, p. 1209-1214 6 p.

Research output: Contribution to journalReview article

Trajectories
trajectories
Wave functions
degrees of freedom
methodology

Quantum-classical path integral. I. Classical memory and weak quantum nonlocality

Lambert, R. & Makri, N., Dec 14 2012, In : Journal of Chemical Physics. 137, 22, 22A552.

Research output: Contribution to journalReview article

Trajectories
Data storage equipment
trajectories
Monte Carlo methods
phase-space integral

Quantum dissipative dynamics: A numerically exact methodology

Makri, N., Jun 11 1998, In : Journal of Physical Chemistry A. 102, 24, p. 4414-4427 14 p.

Research output: Contribution to journalReview article

Hamiltonians
methodology
Decomposition
Electrons
electron transfer

Quantum Dots: Emerging applications in urologic oncology

Shi, C., Zhu, Y., Cerwinka, W. H., Zhau, H. E., Marshall, F. F., Simons, J. W., Nie, S. & Chung, L. W. K., Jan 1 2008, In : Urologic Oncology: Seminars and Original Investigations. 26, 1, p. 86-92 7 p.

Research output: Contribution to journalReview article

Quantum Dots
Urologic Neoplasms
Diagnostic Imaging
Tumor Biomarkers
Fluorescent Dyes

Quantum dots and multifunctional nanoparticles: New contrast agents for tumor imaging

Rhyner, M. N., Smith, A. M., Goo, X., Mao, H., Yang, L. & Nie, S., Aug 1 2006, In : Nanomedicine. 1, 2, p. 209-217 9 p.

Research output: Contribution to journalReview article

Quantum Dots
tumor
Nanoparticles
Contrast Media
Semiconductor quantum dots

Quantum dot surface engineering: Toward inert fluorophores with compact size and bright, stable emission

Lim, S. J., Ma, L., Schleife, A. & Smith, A. M., Aug 1 2016, In : Coordination Chemistry Reviews. 320-321, p. 216-237 22 p.

Research output: Contribution to journalReview article

Fluorophores
Semiconductor quantum dots
quantum dots
engineering
Ligands

Quantum dynamics and control of vibrational dephasing

Gruebele, M., Aug 4 2004, In : Journal of Physics Condensed Matter. 16, 30

Research output: Contribution to journalReview article

Molecular vibrations
degrees of freedom
Hamiltonians
vibration
Molecules

Quantum Monte Carlo for Ab Initio calculations of energy-relevant materials

Wagner, L. K., Jan 15 2014, In : International Journal of Quantum Chemistry. 114, 2, p. 94-101 8 p.

Research output: Contribution to journalReview article

Monte Carlo method
density functional theory
Density functional theory
fossil fuels
Monte Carlo methods

Quorum sensing: How bacteria can coordinate activity and synchronize their response to external signals?

Li, Z. & Nair, S. K., Oct 1 2012, In : Protein Science. 21, 10, p. 1403-1417 15 p.

Research output: Contribution to journalReview article

Acyl-Butyrolactones
Quorum Sensing
Bacteria
Gene expression
Bioluminescence

Radio supernovae in the great survey era

Lien, A., Chakraborty, N., Fields, B. D. & Kemball, A., Oct 10 2011, In : Astrophysical Journal. 740, 1, 23.

Research output: Contribution to journalReview article

supernovae
radio
wavelengths
wavelength
radio telescopes

Ranaviruses of reptiles - An increasing problem

Marschang, R. E., Stohr, A. C. & Allender, M. C., Jan 1 2016, In : Bulletin of the European Association of Fish Pathologists. 36, 4, p. 151-154 4 p.

Research output: Contribution to journalReview article

Ranavirus
Reptiles
reptile
reptiles

Rapid prototyping of microbial cell factories via genome-scale engineering

Si, T., Xiao, H. & Zhao, H., Nov 15 2015, In : Biotechnology Advances. 33, 7, p. 1420-1432 13 p.

Research output: Contribution to journalReview article

Rapid prototyping
Industrial plants
Genes
Genome
Biological systems

Rapid resumption of interrupted visual search new insights on the interaction between vision and memory

Lieras, A., Rensink, R. A. & Enns, J. T., Sep 1 2005, In : Psychological Science. 16, 9, p. 684-688 5 p.

Research output: Contribution to journalReview article

Data Display
Short-Term Memory
Reaction Time

Rare species in multivariate analysis for bioassessment: Some considerations

Cao, Y. & Larsen, D. P., Jan 1 2001, In : Journal of the North American Benthological Society. 20, 1, p. 144-153 10 p.

Research output: Contribution to journalReview article

biological assessment
rare species
multivariate analysis

Reactive oxygen species-responsive drug delivery systems for the treatment of neurodegenerative diseases

Ballance, W. C., Qin, E. C., Chung, H. J., Gillette, M. L. & Kong, H. J., Oct 2019, In : Biomaterials. 217, 119292.

Research output: Contribution to journalReview article

Neurodegenerative diseases
Drug Delivery Systems
Neurodegenerative Diseases
Reactive Oxygen Species
Oxygen

Real time scheduling theory: A historical perspective

Sha, L., Abdelzaher, T., Årzén, K. E., Cervin, A., Baker, T., Burns, A., Buttazzo, G., Caccamo, M., Lehoczky, J. & Mok, A. K., Nov 1 2004, In : Real-Time Systems. 28, 2-3 SPEC. ISS., p. 101-155 55 p.

Research output: Contribution to journalReview article

Real-time Scheduling
Scheduling Theory
Real time systems
Scheduling
Real-time

Reasoning, cognitive control, and moral intuition

Patterson, R., Rothstein, J. & Barbey, A. K., Nov 16 2012, In : Frontiers in Integrative Neuroscience. NOV

Research output: Contribution to journalReview article

Intuition
Cognition
Mindfulness
Meditation
Executive Function

Recent Advances and Future Perspectives of Synthetic Polypeptides from N-Carboxyanhydrides

Song, Z., Tan, Z. & Cheng, J., Nov 26 2019, In : Macromolecules. 52, 22, p. 8521-8539 19 p.

Research output: Contribution to journalReview article

Polypeptides
Peptides
Ring opening polymerization
Biocompatible Materials
Biomaterials

Recent advances in biocatalysis by directed enzyme evolution

Rubin-Pitel, S. B. & Zhao, H., May 1 2006, In : Combinatorial Chemistry and High Throughput Screening. 9, 4, p. 247-257 11 p.

Research output: Contribution to journalReview article

Biocatalysis
Enzymes
Biocatalysts
Catalyst selectivity
Bioelectric potentials

Recent advances in biological production of sugar alcohols

Park, Y. C., Oh, E. J., Jo, J. H., Jin, Y. S. & Seo, J. H., Feb 1 2016, In : Current Opinion in Biotechnology. 37, p. 105-113 9 p.

Research output: Contribution to journalReview article

Sugar Alcohols
Erythritol
Catabolite Repression
Metabolic engineering
Metabolic Engineering
Biosynthesis
Metabolites
Fatty acids
Yeast
Saccharomyces cerevisiae

Recent advances in combinatorial biosynthesis for drug discovery

Sun, H., Liu, Z., Zhao, H. & Ang, E. L., Feb 12 2015, In : Drug Design, Development and Therapy. 9, p. 823-833 11 p.

Research output: Contribution to journalReview article

Drug Discovery
Biological Products
Biosynthetic Pathways
Pharmaceutical Preparations
Poisons

Recent advances in DNAzyme-based gene silencing

Fan, H., Zhang, X. & Lu, Y., May 1 2017, In : Science China Chemistry. 60, 5, p. 591-601 11 p.

Research output: Contribution to journalReview article

Catalytic DNA
Genes
RNA
Gene therapy
Phosphorylation

Recent advances in metabolic engineering of Saccharomyces cerevisiae: New tools and their applications

Lian, J., Mishra, S. & Zhao, H., Nov 2018, In : Metabolic Engineering. 50, p. 85-108 24 p.

Research output: Contribution to journalReview article

Metabolic engineering
Metabolic Engineering
Yeast
Saccharomyces cerevisiae
Clustered Regularly Interspaced Short Palindromic Repeats

Recent advances in nanodisc technology for membrane protein studies (2012–2017)

Rouck, J. E., Krapf, J. E., Roy, J., Huff, H. C. & Das, A., Jul 1 2017, In : FEBS Letters. 591, 14, p. 2057-2088 32 p.

Research output: Contribution to journalReview article

Membrane Proteins
Technology
Nanotechnology
Fluorescence microscopy
Scintillation

Recent advances in natural product discovery

Luo, Y., Cobb, R. E. & Zhao, H., Dec 1 2014, In : Current Opinion in Biotechnology. 30, p. 230-237 8 p.

Research output: Contribution to journalReview article

Biological Products
Bioinformatics
Genomics
Drug products
Screening

Recent advances in solid-state nuclear magnetic resonance techniques to quantify biomolecular dynamics

Watt, E. D. & Rienstra, C. M., Jan 7 2014, In : Analytical chemistry. 86, 1, p. 58-64 7 p.

Research output: Contribution to journalReview article

Membrane Proteins
Animals
Nuclear magnetic resonance

Recent advances in targeted genome engineering in mammalian systems

Sun, N., Abil, Z. & Zhao, H., Sep 1 2012, In : Biotechnology Journal. 7, 9, p. 1074-1087 14 p.

Research output: Contribution to journalReview article

Genome
Homologous Recombination
Gene Targeting
Double-Stranded DNA Breaks
Endonucleases

Recent developments in pyridine nucleotide regeneration

van der Donk, W. A. & Zhao, H., Aug 2003, In : Current Opinion in Biotechnology. 14, 4, p. 421-426 6 p.

Research output: Contribution to journalReview article

Nucleotides
Pyridine
Regeneration
Oxidoreductases
Enzymes

Recent developments in the application of P450 based biocatalysts

Wei, Y., Ang, E. L. & Zhao, H., Apr 2018, In : Current Opinion in Chemical Biology. 43, p. 1-7 7 p.

Research output: Contribution to journalReview article

Mixed Function Oxygenases
Enzymes
Biosynthesis
Biological Products
Cytochrome P-450 Enzyme System

Recent developments of liposomes as nanocarriers for theranostic applications

Xing, H., Hwang, K. & Lu, Y., Jan 1 2016, In : Theranostics. 6, 9, p. 1336-1352 17 p.

Research output: Contribution to journalReview article

Liposomes
Lipid Bilayers
Therapeutics
Genetic Therapy
Immunotherapy

Recent insights into Pasteurella multocida toxin and other G-protein-modulating bacterial toxins

Wilson, B. A. & Ho, M., Aug 1 2010, In : Future Microbiology. 5, 8, p. 1185-1201 17 p.

Research output: Contribution to journalReview article

Bacterial Toxins
GTP-Binding Proteins
Pasteurella multocida
Escherichia coli
Yersinia

Recent Progress in Cancer Thermal Therapy Using Gold Nanoparticles

Abadeer, N. S. & Murphy, C. J., Mar 10 2016, In : Journal of Physical Chemistry C. 120, 9, p. 4691-4716 26 p.

Research output: Contribution to journalReview article

Gold
therapy
cancer
gold
Nanoparticles

Recent progress in nanomaterials for nucleic acid delivery in cancer immunotherapy

Mei, Y., Wang, R., Jiang, W., Bo, Y., Zhang, T., Yu, J., Cheng, M., Wu, Y., Cheng, J. & Ma, W., Jul 2019, In : Biomaterials Science. 7, 7, p. 2640-2651 12 p.

Research output: Contribution to journalReview article

Nucleic acids
RNA
Nanostructured materials
Nucleic Acids
Small Interfering RNA

Recent Progress in Obtaining Semiconducting Single-Walled Carbon Nanotubes for Transistor Applications

Islam, A. E., Rogers, J. A. & Alam, M. A., Dec 22 2015, In : Advanced Materials. 27, 48, p. 7908-7937 30 p.

Research output: Contribution to journalReview article

Single-walled carbon nanotubes (SWCN)
Transistors
Integrated circuits

Reciprocal influences among relational self-views, social disengagement, and peer stress during early adolescence

Caldwell, M. S., Rudolph, K. D., Troop-Gordon, W. & Kim, D. Y., Jul 1 2004, In : Child development. 75, 4, p. 1140-1154 15 p.

Research output: Contribution to journalReview article

disengagement
adolescence
adolescent
Longitudinal Studies
longitudinal study

Recommendations for real-time speech MRI

Lingala, S. G., Sutton, B. P., Miquel, M. E. & Nayak, K. S., Jan 1 2016, In : Journal of Magnetic Resonance Imaging. 43, 1, p. 28-44 17 p.

Research output: Contribution to journalReview article

Magnetic Resonance Imaging
Consensus
Los Angeles
Artifacts
Software

Reconfigurable nanoscale soft materials

Ou, Z., Kim, A., Huang, W., Braun, P. V., Li, X. & Chen, Q., Feb 2019, In : Current Opinion in Solid State and Materials Science. 23, 1, p. 41-49 9 p.

Research output: Contribution to journalReview article

Nanoparticles
Flexible electronics
Kinetics
Adaptive systems
Colloids

Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin

Chakravarti, A., Selvadurai, K., Shahoei, R., Lee, H., Fatma, S., Tajkhorshid, E. & Huang, R. H., Jan 1 2018, In : Journal of Biological Chemistry. 293, 36, p. 14122-14133 12 p.

Research output: Contribution to journalReview article

Substrate Specificity
Antiviral Agents
Substrates
Enzymes
Mevalonic Acid

Reconstructing disturbances and their biogeochemical consequences over multiple timescales

McLauchlan, K. K., Higuera, P. E., Gavin, D. G., Perakis, S. S., Mack, M. C., Alexander, H., Battles, J., Biondi, F., Buma, B., Colombaroli, D., Enders, S. K., Engstrom, D. R., Hu, F. S., Marlon, J. R., Marshall, J., McGlone, M., Morris, J. L., Nave, L. E., Shuman, B., Smithwick, E. A. H. & 4 others, Urrego, D. H., Wardle, D. A., Williams, C. J. & Williams, J. J., Jan 1 2014, In : BioScience. 64, 2, p. 105-116 12 p.

Research output: Contribution to journalReview article

Ecosystem
ecosystems
chronosequences
long term experiments
ecologists

Recovery of rectified signals from hot-wire/film anemometers due to flow reversal in oscillating flows

Yang, Y., Jones, D. L. & Liu, C., Feb 8 2010, In : Review of Scientific Instruments. 81, 1, 015104.

Research output: Contribution to journalReview article

oscillating flow
Oscillating flow
anemometers
Anemometers
recovery

Redesigning photosynthesis to sustainably meet global food and bioenergy demand

Ort, D. R., Merchant, S. S., Alric, J., Barkan, A., Blankenship, R. E., Bock, R., Croce, R., Hanson, M. R., Hibberd, J. M., Long, S. P., Moore, T. A., Moroney, J., Niyogi, K. K., Parry, M. A. J., Peralta-Yahya, P. P., Prince, R. C., Redding, K. E., Spalding, M. H., Van Wijk, K. J., Vermaas, W. F. J. & 5 others, Von Caemmerer, S., Weber, A. P. M., Yeates, T. O., Yuan, J. S. & Zhu, X. G., Jul 14 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 28, p. 8529-8536 8 p.

Research output: Contribution to journalReview article

Photosynthesis
Synthetic Biology
Food
Biofuels
Population Growth

Redox control of the transsulfuration and glutathione biosynthesis pathways.

Deplancke, B. & Gaskins, H. R., Jan 2002, In : Current opinion in clinical nutrition and metabolic care. 5, 1, p. 85-92 8 p.

Research output: Contribution to journalReview article

Oxidation-Reduction
Glutathione
Cysteine
Reactive Oxygen Species
Sulfur Amino Acids

Reducing falls and improving mobility in multiple sclerosis

Sosnoff, J. J. & Sung, J., Jun 1 2015, In : Expert Review of Neurotherapeutics. 15, 6, p. 655-666 12 p.

Research output: Contribution to journalReview article

Multiple Sclerosis
Rehabilitation
Quality of Life
Wounds and Injuries
Therapeutics

Regeneration of cofactors for use in biocatalysis

Zhao, H. & van der Donk, W. A., Dec 2003, In : Current Opinion in Biotechnology. 14, 6, p. 583-589 7 p.

Research output: Contribution to journalReview article

Biocatalysis
Regeneration
Enzymes
Phosphoadenosine Phosphosulfate
Adenosinetriphosphate

Regulating anxiety with extrasynaptic inhibition

Botta, P., Demmou, L., Kasugai, Y., Markovic, M., Xu, C., Fadok, J. P., Lu, T., Poe, M. M., Xu, L., Cook, J. M., Rudolph, U., Sah, P., Ferraguti, F. & Lüthi, A., Oct 28 2015, In : Nature Neuroscience. 18, 10, p. 1493-1500 8 p.

Research output: Contribution to journalReview article

Anxiety
Fear
Neurons
Protein Kinase C
Optogenetics

Regulation of bacterial metabolism by small RNAs using diverse mechanisms

Bobrovskyy, M. & Vanderpool, C., Nov 2013, In : Annual Review of Genetics. 47, p. 209-232 24 p.

Research output: Contribution to journalReview article

RNA
Bacterial RNA
Bacteria
Starvation
Metabolic Networks and Pathways

Regulation of gene expression during adipocyte differentiation: a review.

Gaskins, H. R., Hausman, G. J. & Martin, R. J., Sep 1989, In : Journal of animal science. 67, 9, p. 2263-2272 10 p.

Research output: Contribution to journalReview article

gene expression regulation
Gene Expression Regulation
adipocytes
Adipocytes
Gene Expression
Oviducts
oviducts
Polysaccharides
Spermatozoa
epithelium