Research Output 1969 2020

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Review article
2020

Emerging molecular biology tools and strategies for engineering natural product biosynthesis

Xu, W., Klumbys, E., Ang, E. L. & Zhao, H., Jun 2020, In : Metabolic Engineering Communications. 10, e00108.

Research output: Contribution to journalReview article

Open Access
Molecular biology
Biosynthesis
Biological Products
Molecular Biology
Enzymes

Review and categorization of existing studies on the estimation of probabilistic failure metrics for Reactor Coolant Pressure Boundary piping and steam generator tubes in Nuclear Power Plants

Cheng, W. C., Sakurahara, T., Zhang, S., Farshadmanesh, P., Reihani, S., Kee, E., Mohaghegh, Z., Heckmann, K., Sievers, J., Lydell, B., Zammali, C., Yuan, X. X., Duan, X., Alzbutas, R., Lee, G. G., Karim, J. A., Morozov, V., Takasugi, C. & Jevremovic, T., Jan 2020, In : Progress in Nuclear Energy. 118, 103105.

Research output: Contribution to journalReview article

Water cooled reactors
piping
Steam generators
nuclear power plant
Nuclear energy

The influence of rising tropospheric carbon dioxide and ozone on plant productivity

Ainsworth, E. A., Lemonnier, P. & Wedow, J. M., Jan 1 2020, In : Plant Biology. 22, S1, p. 5-11 7 p.

Research output: Contribution to journalReview article

Open Access
ozone
carbon dioxide
productivity
terrestrial ecosystem
pollutants
2019

Advanced Electrochemical Analysis for Energy Storage Interfaces

Hui, J., Gossage, Z. T., Sarbapalli, D., Hernández-Burgos, K. & Rodriguez Lopez, J., Jan 2 2019, In : Analytical chemistry. 91, 1, p. 60-83 24 p.

Research output: Contribution to journalReview article

Energy storage

Advances in energy systems for valorization of aqueous byproducts generated from hydrothermal processing of biomass and systems thinking

Gu, Y., Zhang, X., Deal, B., Han, L., Zheng, J. & Ben, H., Jan 1 2019, In : Green Chemistry. 21, 10, p. 2518-2543 26 p.

Research output: Contribution to journalReview article

liquefaction
Byproducts
Biomass
nutrient
biomass

Advancing point-of-care diagnostics of metabolites through engineering semisynthetic proteins

Zhang, J. J. & Lu, Y., Apr 2019, In : Clinical Chemistry. 65, 4, p. 507-509 3 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Protein Engineering
Metabolites
Proteins

Aerosol Mixing State: Measurements, Modeling, and Impacts

Riemer, N., Ault, A. P., West, M., Craig, R. L. & Curtis, J. H., Jun 2019, In : Reviews of Geophysics. 57, 2, p. 187-249 63 p.

Research output: Contribution to journalReview article

aerosols
aerosol
modeling
atmospheric models
optical property

Air Pollution and Noncommunicable Diseases: A Review by the Forum of International Respiratory Societies’ Environmental Committee, Part 1: The Damaging Effects of Air Pollution

Schraufnagel, D. E., Balmes, J. R., Cowl, C. T., De Matteis, S., Jung, S. H., Mortimer, K., Perez-Padilla, R., Rice, M. B., Riojas-Rodriguez, H., Sood, A., Thurston, G. D., To, T., Vanker, A. & Wuebbles, D. J., Feb 2019, In : Chest. 155, 2, p. 409-416 8 p.

Research output: Contribution to journalReview article

Air Pollution
Particulate Matter
Indoor Air Pollution
Quality-Adjusted Life Years
Health

Air Pollution and Noncommunicable Diseases: A Review by the Forum of International Respiratory Societies’ Environmental Committee, Part 2: Air Pollution and Organ Systems

Schraufnagel, D. E., Balmes, J. R., Cowl, C. T., De Matteis, S., Jung, S. H., Mortimer, K., Perez-Padilla, R., Rice, M. B., Riojas-Rodriguez, H., Sood, A., Thurston, G. D., To, T., Vanker, A. & Wuebbles, D. J., Feb 2019, In : Chest. 155, 2, p. 417-426 10 p.

Research output: Contribution to journalReview article

Air Pollution
Lung
Particulate Matter
Child Development
Blepharitis

All-dielectric concentration of electromagnetic fields at the nanoscale: The role of photonic nanojets

Zhu, J. & Goddard, L. L., Jan 1 2019, In : Nanoscale Advances. 1, 12, p. 4615-4643 29 p.

Research output: Contribution to journalReview article

Open Access
Electromagnetic fields
Photonics
electromagnetic fields
photonics
Nonlinear optics
plasticity
phenotype
environmental cue
communication
effect

Antimicrobial effects on swine gastrointestinal microbiota and their accompanying antibiotic resistome

Zeineldin, M., Aldridge, B. & Lowe, J., Jan 1 2019, In : Frontiers in Microbiology. 10, MAY, 1035.

Research output: Contribution to journalReview article

Open Access
Swine
Anti-Bacterial Agents
Microbiota
Industry
Health

A review of geochemical–mechanical impacts in geological carbon storage reservoirs

Akono, A. T., Druhan, J. L., Dávila, G., Tsotsis, T., Jessen, K., Fuchs, S., Crandall, D., Shi, Z., Dalton, L., Tkach, M. K., Goodman, A. L., Frailey, S. & Werth, C. J., Jan 1 2019, In : Greenhouse Gases: Science and Technology.

Research output: Contribution to journalReview article

Carbon Monoxide
carbon sequestration
Carbon
mechanical property
Underground reservoirs

A review of modeling interacting transient phenomena with non-equilibrium Green functions

Hirsbrunner, M. R., Philip, T. M., Basa, B., Kim, Y., Jip Park, M. & Gilbert, M., Mar 5 2019, In : Reports on Progress in Physics. 82, 4, 046001.

Research output: Contribution to journalReview article

Green's functions
molecular electronics
frequency response
transistors
universe

A small-molecule competitive inhibitor of phosphatidic acid binding by the AAA+ protein NSF/Sec18 blocks the SNARE-priming stage of vacuole fusion

Sparks, R. P., Arango, A. S., Starr, M. L., Aboff, Z. L., Hurst, L. R., Rivera-Kohr, D. A., Zhang, C., Harnden, K. A., Jenkins, J. L., Guida, W. C., Tajkhorshid, E. & Fratti, R. A., Jan 1 2019, In : Journal of Biological Chemistry. 294, 46, p. 17168-17185 18 p.

Research output: Contribution to journalReview article

Open Access
N-Ethylmaleimide-Sensitive Proteins
SNARE Proteins
Phosphatidic Acids
Vacuoles
Carrier Proteins

Balance and Gait Alterations Observed More Than 2 Weeks after Concussion: A Systematic Review and Meta-Analysis

Wood, T. A., Hsieh, K. L., An, R., Ballard, R. A. & Sosnoff, J. J., Jul 1 2019, In : American Journal of Physical Medicine and Rehabilitation. 98, 7, p. 566-576 11 p.

Research output: Contribution to journalReview article

Gait
Meta-Analysis
Pressure
Sensory Feedback
Wounds and Injuries

Bioapplications of DNA nanotechnology at the solid-liquid interface

Wang, W., Yu, S., Huang, S., Bi, S., Han, H., Zhang, J. R., Lu, Y. & Zhu, J. J., Sep 21 2019, In : Chemical Society Reviews. 48, 18, p. 4892-4920 29 p.

Research output: Contribution to journalReview article

Nanotechnology
DNA
Liquids
Cell membranes
Nanoparticles

Bio-based chemicals from renewable biomass for integrated biorefineries

Kohli, K., Prajapati, R. & Sharma, B. K., Jan 13 2019, In : Energies. 12, 2, 233.

Research output: Contribution to journalReview article

Biomass
Sugars
Feedstocks
Catalyst
Purification

Biological systems for treatment and valorization of wastewater generated from hydrothermal liquefaction of biomass and systems thinking: A review

Gu, Y., Zhang, X., Deal, B. & Han, L., Apr 2019, In : Bioresource Technology. 278, p. 329-345 17 p.

Research output: Contribution to journalReview article

Biological systems
Liquefaction
liquefaction
Biomass
Wastewater

Candidate massive galaxies at z ∼ 4 in the Dark Energy Survey

Guarnieri, P., Maraston, C., Thomas, D., Pforr, J., Gonzalez-Perez, V., Etherington, J., Carlsen, J., Morice-Atkinson, X., Conselice, C. J., Gschwend, J., Kind, M. C., Abbott, T., Allam, S., Brooks, D., Burke, D., Rosell, A. C., Carretero, J., Cunha, C., D'Andrea, C., Da Costa, L. & 35 others, De Vincente, J., DePoy, D., Thomas Diehl, H., Doel, P., Frieman, J., Garcia-Bellido, J., Gruen, D., Gutierrez, G., Hanley, D., Hollowood, D., Honscheid, K., James, D., Jeltema, T., Kuehn, K., Lima, M., Maia, M. A. G., Marshall, J., Martini, P., Melchior, P., Menanteau, F., Miquel, R., PlazasMalagon, A., Richardson, S., Romer, K., Sanchez, E., Scarpine, V., Schindler, R., Sevilla, I., Smith, M., Soares-Santos, M., Sobreira, F., Suchyta, E., Tarle, G., Walker, A. & Wester, W., Jan 1 2019, In : Monthly Notices of the Royal Astronomical Society. 483, 3, p. 3060-3081 22 p.

Research output: Contribution to journalReview article

dark energy
galaxies
energy
goodness of fit
probability distribution functions

Carbon assimilation in crops at high temperatures

Slattery, R. A. & Ort, D. R., Oct 1 2019, In : Plant Cell and Environment. 42, 10, p. 2750-2758 9 p.

Research output: Contribution to journalReview article

Open Access
Carbon
Temperature
Photosynthesis
crops
temperature

Characterization of Lipid-Protein Interactions and Lipid-Mediated Modulation of Membrane Protein Function through Molecular Simulation

Muller, M. P., Jiang, T., Sun, C., Lihan, M., Pant, S., Mahinthichaichan, P., Trifan, A. & Tajkhorshid, E., May 8 2019, In : Chemical reviews. 119, 9, p. 6086-6161 76 p.

Research output: Contribution to journalReview article

Membrane Proteins
Modulation
Lipids
Proteins
Molecular dynamics
Open Access
Separators
Rate constants
Numerical models
Polarization
Kinetics

Computational Approaches to Photoelectrode Design through Molecular Functionalization for Enhanced Photoelectrochemical Water Splitting

Iyer, A., Kearney, K. & Ertekin, E., May 8 2019, In : ChemSusChem. 12, 9, p. 1858-1871 14 p.

Research output: Contribution to journalReview article

electrolyte
Electrolytes
Water
Photoelectrochemical cells
water

Computational Dissection of Membrane Transport at a Microscopic Level

Jiang, T., Wen, P. C., Trebesch, N., Zhao, Z., Pant, S., Kapoor, K., Shekhar, M. & Tajkhorshid, E., Jan 1 2019, (Accepted/In press) In : Trends in Biochemical Sciences.

Research output: Contribution to journalReview article

Dissection
Membrane Transport Proteins
Membranes
Molecular Dynamics Simulation
Computational methods

Consistency of cosmic microwave background temperature measurements in three frequency bands in the 2500-square-degree SPT-SZ survey

Mocanu, L. M., Crawford, T. M., Aylor, K., Benson, B. A., Bleem, L. E., Carlstrom, J. E., Chang, C. L., Cho, H. M., Chown, R., Crites, A. T., De Haan, T., Dobbs, M. A., Everett, W. B., George, E. M., Halverson, N. W., Harrington, N. L., Henning, J. W., Holder, G. P., Holzapfel, W. L., Hou, Z. & 25 others, Hrubes, J. D., Knox, L., Lee, A. T., Luong-Van, D., Marrone, D. P., McMahon, J. J., Meyer, S. S., Millea, M., Mohr, J. J., Natoli, T., Omori, Y., Padin, S., Pryke, C., Reichardt, C. L., Ruhl, J. E., Sayre, J. T., Schaffer, K. K., Shirokoff, E., Staniszewski, Z., Stark, A. A., Story, K. T., Vanderlinde, K., Vieira, J. D., Williamson, R. & Wu, W. L. K., Jul 24 2019, In : Journal of Cosmology and Astroparticle Physics. 2019, 7, 038.

Research output: Contribution to journalReview article

temperature measurement
power spectra
poles
telescopes
microwaves

Contribution of the Mucosal Microbiota to Bovine Respiratory Health

Zeineldin, M., Lowe, J. F. & Aldridge, B. M., Sep 2019, In : Trends in Microbiology. 27, 9, p. 753-770 18 p.

Research output: Contribution to journalReview article

Microbiota
Cattle Diseases
Health
Ecosystem
Dysbiosis

Coronary Microvascular Dysfunction and Estrogen Receptor Signaling

Tunc, E., Eve, A. A. & Madak-Erdogan, Z., Jan 1 2019, (Accepted/In press) In : Trends in Endocrinology and Metabolism.

Research output: Contribution to journalReview article

Estrogen Receptors
Coronary Disease
Estrogens
Microvessels
Chest Pain
Open Access
Cotesia
Nymphalidae
Braconidae
Hymenoptera
Brazil

Crosstalk between Estrogen Signaling and Breast Cancer Metabolism

Kulkoyluoglu-Cotul, E., Arca, A. & Madak-Erdogan, Z., Jan 2019, In : Trends in Endocrinology and Metabolism. 30, 1, p. 25-38 14 p.

Research output: Contribution to journalReview article

Estrogens
Breast Neoplasms
Estrogen Receptors
Drug Resistance
Clone Cells

Darwinian bee-keeping: lessons from the wild

Robinson, G., Jul 1 2019, In : Nature. 571, 7763, p. 34-35

Research output: Contribution to journalReview article

Discovery of and Insights into DNA “Codes” for Tunable Morphologies of Metal Nanoparticles

Satyavolu, N. S. R., Loh, K. Y., Tan, L. H. & Lu, Y., Jun 26 2019, In : Small. 15, 26, 1900975.

Research output: Contribution to journalReview article

Metal Nanoparticles
Metal nanoparticles
DNA
Nanoparticles
Nanostructures

Drinking Water Microbiome Project: Is it Time?

Hull, N. M., Ling, F., Pinto, A. J., Albertsen, M., Jang, H. G., Hong, P. Y., Konstantinidis, K. T., LeChevallier, M., Colwell, R. R. & Liu, W-T., Aug 2019, In : Trends in Microbiology. 27, 8, p. 670-677 8 p.

Research output: Contribution to journalReview article

Microbiota
Drinking Water
Practice Guidelines
Public Health
Learning

Economics of plant oil recovery: A review

Cheng, M. H., Dien, B. S. & Singh, V., Mar 2019, In : Biocatalysis and Agricultural Biotechnology. 18, 101056.

Research output: Contribution to journalReview article

plant fats and oils
Plant Oils
pressing
Economics
Costs and Cost Analysis

Editorial

Stine-Morrow, E. A. L., Feb 1 2019, In : Psychology and aging. 34, 1, p. 1-3 3 p.

Research output: Contribution to journalReview article

Effectiveness of Workplace Lactation Interventions on Breastfeeding Outcomes in the United States: An Updated Systematic Review

Kim, J. H., Shin, J. C. & Donovan, S. M., Feb 1 2019, In : Journal of Human Lactation. 35, 1, p. 100-113 14 p.

Research output: Contribution to journalReview article

Breast Feeding
Lactation
Workplace
Breast
Parental Leave

Electrocatalysis on ultra-thin 2D electrodes: New concepts and prospects for tailoring reactivity

Schorr, N. B., Hui, J. & Rodríguez-López, J., Feb 2019, In : Current Opinion in Electrochemistry. 13, p. 100-106 7 p.

Research output: Contribution to journalReview article

Electrocatalysis
Electrodes
Graphite
Graphene
Heterojunctions

Emergence of Hierarchical Modularity in Evolving Networks Uncovered by Phylogenomic Analysis

Caetano-Anollés, G., Aziz, M. F., Mughal, F., Gräter, F., Koç, I., Caetano-Anollés, K. & Caetano-Anollés, D., Jan 1 2019, In : Evolutionary Bioinformatics. 15

Research output: Contribution to journalReview article

Open Access
Metabolomics
Metabolic Networks and Pathways
Transcriptome
Proteins
protein

Emerging class of omega-3 fatty acid endocannabinoids & their derivatives

Watson, J. E., Kim, J. S. & Das, A., Aug 2019, In : Prostaglandins and Other Lipid Mediators. 143, 106337.

Research output: Contribution to journalReview article

Endocannabinoids
Omega-3 Fatty Acids
Derivatives
Cannabinoid Receptors
Dopamine
Methanosarcina
Hydrogenase
Archaea
Methane
formic acid

Evidence of preserved audience design with aging in interactive conversation

Yoon, S. O. & Stine-Morrow, E. A. L., Jun 2019, In : Psychology and aging. 34, 4, p. 613-623 11 p.

Research output: Contribution to journalReview article

Young Adult
Memory Disorders
Mental Competency

Exercise and the Gut Microbiome: A Review of the Evidence, Potential Mechanisms, and Implications for Human Health

Mailing, L. J., Allen, J. M., Buford, T. W., Fields, C. J. & Woods, J. A., Apr 1 2019, In : Exercise and Sport Sciences Reviews. 47, 2, p. 75-85 11 p.

Research output: Contribution to journalReview article

Health
Gastrointestinal Tract
Exercise
Gastrointestinal Microbiome

Exploring the Fundamental Structures of Life: Non-Targeted, Chemical Analysis of Single Cells and Subcellular Structures

Neumann, E. K., Do, T. D., Comi, T. J. & Sweedler, J. V., Jul 8 2019, In : Angewandte Chemie - International Edition. 58, 28, p. 9348-9364 17 p.

Research output: Contribution to journalReview article

Chemical analysis
Throughput
Imaging techniques
Data storage equipment

Genetic strategies for improving crop yields

Bailey-Serres, J., Parker, J. E., Ainsworth, E. A., Oldroyd, G. E. D. & Schroeder, J. I., Nov 7 2019, In : Nature. 575, 7781, p. 109-118 10 p.

Research output: Contribution to journalReview article

Open Access
Infrared Rays
Weather
Agriculture
Climate
Population

Genome organization around nuclear speckles

Chen, Y. & Belmont, A. S., Apr 2019, In : Current Opinion in Genetics and Development. 55, p. 91-99 9 p.

Research output: Contribution to journalReview article

Microscopy
Genome
Chromosome Mapping
Eukaryotic Cells
Cell Nucleus

Health benefits of air pollution reduction

on behalf of the Forum of International Respiratory Societies Environmental Committee, Jan 1 2019, In : Annals of the American Thoracic Society. 16, 12, p. 1478-1487 10 p.

Research output: Contribution to journalReview article

Air Pollution
Insurance Benefits
Health
Absenteeism
Pharyngitis

Health benefits of yogurt among infants and toddlers aged 4 to 24 months: A systematic review

Donovan, S. M. & Rao, G., Jan 1 2019, In : Nutrition reviews. 77, 7, p. 478-486 9 p.

Research output: Contribution to journalReview article

Yogurt
Insurance Benefits
Cohort Studies
Cultured Milk Products
Information Storage and Retrieval

Hybridization in human evolution: Insights from other organisms

Ackermann, R. R., Arnold, M. L., Baiz, M. D., Cahill, J. A., Cortés-Ortiz, L., Evans, B. J., Grant, B. R., Grant, P. R., Hallgrimsson, B., Humphreys, R. A., Jolly, C. J., Malukiewicz, J., Percival, C. J., Ritzman, T. B., Roos, C., Roseman, C. C., Schroeder, L., Smith, F. H., Warren, K. A., Wayne, R. K. & 1 others, Zinner, D., Jan 1 2019, In : Evolutionary anthropology. 28, 4, p. 189-209 21 p.

Research output: Contribution to journalReview article

collective research
environmental factors
climate change
driver
cause

Ignaczak equation of elastodynamics

Starzewski, M. O., Nov 1 2019, In : Mathematics and Mechanics of Solids. 24, 11, p. 3674-3713 40 p.

Research output: Contribution to journalReview article

Elastodynamics
Formulation
Wave propagation
Wave Propagation
Micropolar

Impact factor impacts on early-career scientist careers

Berenbaum, M. R., Aug 20 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 34, p. 16659-16662 4 p.

Research output: Contribution to journalReview article

Open Access