Research Output 1968 2020

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2013

Construction and engineering of large biochemical pathways via DNA assembler

Shao, Z. & Zhao, H., Sep 20 2013, Synthetic Biology. Polizzi, K. & Kontoravdi, C. (eds.). p. 85-106 22 p. (Methods in Molecular Biology; vol. 1073).

Research output: Chapter in Book/Report/Conference proceedingChapter

Multigene Family
DNA
Synthetic Biology
Metabolic Engineering
Homologous Recombination

Construction and screening of an antigen-derived peptide library displayed on yeast cell surface for CD4+ T cell epitope identification

Wen, F. & Zhao, H., Sep 20 2013, Immunoproteomics: Methods and Protocols. Fulton, K. & Twine, S. (eds.). p. 245-264 20 p. (Methods in Molecular Biology; vol. 1061).

Research output: Chapter in Book/Report/Conference proceedingChapter

Peptide Library
T-Lymphocyte Epitopes
Yeasts
Major Histocompatibility Complex
Antigens

CRISPR-Cas systems to probe ecological diversity and host-viral interactions

Held, N. L., Childs, L. M., Davison, M., Weitz, J. S., Whitaker, R. & Bhaya, D., Jan 1 2013, CRISPR-Cas Systems: RNA-Mediated Adaptive Immunity in Bacteria and Archaea. Springer Berlin Heidelberg, p. 221-250 30 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

CRISPR-Cas Systems
Clustered Regularly Interspaced Short Palindromic Repeats
Viruses
Horizontal Gene Transfer
Viral Genome

Desalination

Namboodiri, V. & Rajagopalan, N., Oct 2013, Assuring Purity of Drinking Water. Elsevier Inc., Vol. 2. p. 98-119 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

desalination
Desalination
Fresh Water
Hot Temperature
Renewable Energy

Dispersive soil hazards

Stumpf, A. J., Jan 1 2013, Encyclopedia of Earth Sciences Series. Springer Netherlands, p. 186-187 2 p. (Encyclopedia of Earth Sciences Series).

Research output: Chapter in Book/Report/Conference proceedingChapter

hazard
soil
filter
agriculture
history

Drug Discovery and Development via Synthetic Biology

Cobb, R. E., Luo, Y., Freestone, T. & Zhao, H., Aug 27 2013, Synthetic Biology. Elsevier Inc., p. 183-206 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Synthetic Biology
Drug Discovery
Multigene Family
Biological Products
Erythromycin

Employing the biology of successful fracture repair to heal critical size bone defects

Cameron, J. A., Milner, D. J., Lee, J. S., Cheng, J., Fang, N. X. & Jasiuk, I. M., Apr 29 2013, New Perspectives in Regeneration. p. 113-132 20 p. (Current Topics in Microbiology and Immunology; vol. 367).

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone and Bones
Bone Regeneration
Blood Vessels
Osteogenesis
Extremities

Fourier transform light scattering of tissues

Kim, T., Sridharan, S. & Popescu, G., Jan 1 2013, Handbook of Coherent-Domain Optical Methods: Biomedical Diagnostics, Environmental Monitoring, and Materials Science:: Second Edition. Springer New York, Vol. 1-2. p. 259-290 32 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Fourier Analysis
Light scattering
Fourier transforms
Tissue
Light

From molehill to mountain: The process of scaling up educational interventions (firsthand experience upscaling the theory of successful intelligence)

Sternberg, R. J., Birney, D., Kirlik, A., Stemler, S., Jarvin, L. & Grigorenko, E. L., Jan 1 2013, Translating Theory and Research Into Educational Practice: Developments in Content Domains, Large-Scale Reform, and Intellectual Capacity. Taylor and Francis, p. 205-221 17 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

scaling
intelligence
experience

Functional DNA-integrated nanomaterials for biosensing

Li, L. & Lu, Y., Aug 1 2013, DNA Nanotechnology: From Structure to Function. Springer-Verlag Berlin Heidelberg, Vol. 9783642360770. p. 277-305 29 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanostructures
Nanostructured materials
DNA
Nanoparticles
Molecules

Gene and Operon Fusions

Slauch, J. M., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 173-176 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Gene Fusion
operon
Operon
Fusion reactions
Genes

Genomic Changes in Response to 110 Cycles of Selection for Seed Protein and Oil Concentration in Maize

Lucas, C. J., Zhao, H., Schneerman, M. & Moose, S. P., Feb 5 2013, Seed Genomics. Wiley Blackwell, p. 217-236 20 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Zea mays
Seeds
Oils
genomics
oils

High-aspect-ratio gold nanorods: Their synthesis and application to image cell-induced strain fields in collagen films

Chernak, D. J., Sisco, P. N., Goldsmith, E. C., Baxter, S. C. & Murphy, C. J., Sep 3 2013, NanoBiotechnology Protocols. p. 1-20 20 p. (Methods in Molecular Biology; vol. 1026).

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanotubes
Gold
Collagen
Light
Traction

Hydrocompaction subsidence

Stumpf, A. J., Jan 1 2013, Encyclopedia of Earth Sciences Series. Springer Netherlands, p. 496-497 2 p. (Encyclopedia of Earth Sciences Series).

Research output: Chapter in Book/Report/Conference proceedingChapter

global perspective
natural hazard
terminology
subsidence
soil

Imaging and tracking of bone marrow-derived immune and stem cells

Zhao, Y., Bower, A. J., Graf, B. W., Boppart, M. D. & Boppart, S. A., Sep 4 2013, Imaging and Tracking Stem Cells: Methods and Protocols. p. 57-76 20 p. (Methods in Molecular Biology; vol. 1052).

Research output: Chapter in Book/Report/Conference proceedingChapter

Stem Cells
Bone Marrow
Microscopy
Bone Marrow Cells
Regeneration

Imperial Frictions: Thinking through Impediments in Empire History

Burton, A. M., 2013, Routledge History of Western Empires. Aldrich, R. & McKenzie, K. (eds.). Routledge, p. 497-501 5 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Improving the photosynthetic productivity and light utilization in algal biofuel systems: Metabolic and physiological characterization of a potentially advantageous mutant of chlamydomonas reinhardtii

Zhou, Y., Schideman, L. C., Govindjee, Rupassara, S. I. & Seufferheld, M. J., Jan 1 2013, Advanced Topics in Science and Technology in China. Springer, p. 523-527 5 p. (Advanced Topics in Science and Technology in China).

Research output: Chapter in Book/Report/Conference proceedingChapter

Biofuels
Photons
Productivity
High intensity light
Metabolites

Inflammation, reproduction, and the goldilocks principle

Clancy, K. B. H., Jan 1 2013, Building Babies: Primate Development in Proximate and Ultimate Perspective. Springer New York, p. 3-26 24 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

C-Reactive Protein
Reproduction
Inflammation
Pregnancy

Insect Resistance to Crop Rotation

Spencer, J. L., Hughson, S. A. & Levine, E., Oct 1 2013, Insect Resistance Management: Second Edition. Elsevier Ltd, p. 233-278 46 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Zea mays
Crops
Insects
Diabrotica barberi
Diabrotica

Insights into Lignin Degradation and its Potential Industrial Applications

Abdel-Hamid, A. M., Solbiati, J. O. & Cann, I., Jan 1 2013, Advances in Applied Microbiology. Academic Press Inc., p. 1-28 28 p. (Advances in Applied Microbiology; vol. 82).

Research output: Chapter in Book/Report/Conference proceedingChapter

Lignin
manganese peroxidase
Peroxidases
Laccase
Peroxidase

In Vivo Synthesis of Tissues and Organs

Harley, B. A. & Yannas, I. V., Nov 1 2013, Principles of Tissue Engineering: Fourth Edition. Elsevier Inc., p. 325-355 31 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Regeneration
Tissue
Extracellular Matrix
Scaffolds
Wounds and Injuries

Jack of all trades, master of ... Some? Multitasking in digital consumers

Chinchanachokchai, S. & Duff, B., May 7 2013, The Routledge Companion to Digital Consumption. Taylor and Francis, p. 367-377 11 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Jus Post Bellum and Political Reconciliation

Murphy, C. & Radzik, L., Oct 2013, Jus Post Bellum and Transitional Justic . May, L. & Edenberg, E. (eds.). Cambridge University Press, p. 305-326 11. (ASIL Studies in International Legal Theory).

Research output: Chapter in Book/Report/Conference proceedingChapter

List-method directed forgetting in cognitive and clinical research: A theoretical and methodological review

Sahakyan, L., Delaney, P. F., Foster, N. L. & Abushanab, B., Jan 1 2013, Psychology of Learning and Motivation - Advances in Research and Theory. Academic Press Inc., p. 131-189 59 p. (Psychology of Learning and Motivation - Advances in Research and Theory; vol. 59).

Research output: Chapter in Book/Report/Conference proceedingChapter

Cues
Research
Population
Research Personnel
Inhibition (Psychology)

Management of wetlands for wildlife

Gray, M. J., Hagy, H., Nyman, J. A. & Stafford, J. D., Jan 1 2013, Wetland Techniques: Volume 3: Applications and Management. Springer Netherlands, p. 121-180 60 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Wetlands
wildlife
wetlands
wetland
Ecosystem

Measurement of relative metamnemonic accuracy

Benjamin, A. S. & Diaz, M., Jan 1 2013, Handbook of Metamemory and Memory. Taylor and Francis, p. 73-94 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mechanophores for self-healing applications

Diesendruck, C. E. & Moore, J. S., Jun 24 2013, Self-Healing Polymers: From Principles to Applications. Wiley-VCH Verlag, p. 193-214 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metalloprotein Design

Lu, Y., Chakraborty, S., Miner, K. D., Wilson, T. D., Mukherjee, A., Yu, Y., Liu, J. & Marshall, N. M., Aug 1 2013, Comprehensive Inorganic Chemistry II (Second Edition): From Elements to Applications. Elsevier Ltd, Vol. 3. p. 565-593 29 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Metalloproteins
Nitrogen fixation
Signal transduction
Proteins
Photosynthesis

Molecular Clock

Wang, M. & Caetano-Anolles, G., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 461-462 2 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Molecular Evolution
Clocks
Macromolecules

National Park Service Cave Ecology Inventory and Monitoring Framework

Baker, G. M., Taylor, S., Thomas, S., Olson, R., Lavoie, K., Denn, M., Thomas, S. C., Barton, H., Helf, K. L., Ohms, R., Despain, J., Kennedy, J. & Larson, D., 2013, National Cave and Karst Management Symposium: Proceedings of the Twentieth Conference: November 4–8, Carlsbad, New Mexico: NCKRI Symposium 3. Carlsbad (NM). Land, L. & Joop, M. (eds.). Carlsbad, NM: National Cave and Karst Research Institute, p. 117-125

Research output: Chapter in Book/Report/Conference proceedingChapter

Near-Fields in assembled plasmonic nanostructures

Jain, P. & Deeb, C., Jan 1 2013, Handbook of Molecular Plasmonics. Pan Stanford Publishing Pte. Ltd., p. 261-294 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Nanostructures
near fields

New approaches in microbial pathogen detection

Kahyaoglu, L. N. & Irudayaraj, J. M. K., Jul 1 2013, Advances in Microbial Food Safety. Elsevier Ltd, Vol. 1. p. 202-226 25 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

microbial detection
Pathogens
Viruses
viruses
Hepatitis E virus

New Mass Spectrometric Approaches for Uncovering Neuropeptides

Hou, X. & Sweedler, J. V., Aug 29 2013, Handbook of Biologically Active Peptides. Elsevier Inc., p. 1749-1756 8 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Neuropeptides

Northwestern North America

Gavin, D. G. & Hu, F. S., Jan 1 2013, Encyclopedia of Quaternary Science: Second Edition. Elsevier Inc., p. 124-132 9 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

vegetation
Cordilleran Ice Sheet
Holocene
climate
history

Numerical Solution of the Fokker-Planck Equation by Finite Difference and Finite Element Methods - A Comparative Study

Pichler, L., Masud, A. & Bergman, L. A., Jan 1 2013, Computational Methods in Applied Sciences. Springer Netherland, p. 69-85 17 p. (Computational Methods in Applied Sciences; vol. 26).

Research output: Chapter in Book/Report/Conference proceedingChapter

Fokker Planck equation
Fokker-Planck Equation
Comparative Study
Finite Difference
Finite Element Method

On transformation: Reflections on the work of, and working with, Gunther Kress

Kalantzis, M. & Cope, W., Jan 1 2013, Multimodality and Social Semiosis: Communication, Meaning-Making, and Learning in the Work of Gunther Kress. Taylor and Francis, p. 16-30 15 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Ovarian toxicity caused by pesticides

Wang, W., Hannon, P. & Flaws, J. A., Jan 1 2013, Ovarian Toxicology, Second Edition. CRC Press, p. 117-150 34 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pesticides
Insects
Plant Weeds
Time-to-Pregnancy
Methoxychlor

Parallel Adaptive Deflated GMRES

Wakam, D. N., Erhel, J. & Gropp, W. D., Jul 25 2013, Domain Decomposition Methods in Science and Engineering XX. Bank, R., Holst, M., Xu, J. & Widlund, O. (eds.). p. 631-638 8 p. (Lecture Notes in Computational Science and Engineering; vol. 91).

Research output: Chapter in Book/Report/Conference proceedingChapter

GMRES
Iterative methods
Convergence Rate
Industrial applications
GMRES Method

Parsimony

Olsen, G. J., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 229-232 4 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Systematic errors
data analysis

Pathway engineering as an enabling synthetic biology tool

Eriksen, D. T., Li, S. & Zhao, H., Aug 27 2013, Synthetic Biology. Elsevier Inc., p. 43-61 19 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Synthetic Biology
Metabolic Networks and Pathways
Glucaric Acid

Pattern recognition applied to spectroscopy: Conventional methods and future directions

Craig, A. P., Franca, A. S. & Irudayaraj, J. M. K., Mar 1 2013, Pattern Recognition: Practices, Perspectives and Challenges. Nova Science Publishers, Inc., p. 1-45 45 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Pattern recognition
Spectroscopy
Linear regression
Principal component analysis
Support vector machines

Perspectives on workgroup conflict and communication

Garner, J. T. & Poole, M. S., Jan 1 2013, The SAGE Handbook of Conflict Communication: Integrating Theory, Research, and Practice. SAGE Publications Inc., p. 321-348 28 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

communication

Physical activity, cardiorespiratory fitness, and cognition across the lifespan

McAuley, E., Mullen, S. P. & Hillman, C. H., Jan 1 2013, Social Neuroscience and Public Health: Foundations for the Science of Chronic Disease Prevention. Springer New York, p. 235-252 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Cognition
Exercise
Brain
Health
Executive Function

Political reconciliation, punishment, and grudge informers

Murphy, C., Jan 1 2013, Justice, Responsibility and Reconciliation in the Wake of Conflict. MacLachlan, A. & Speight, A. (eds.). Springer Netherlands, p. 117-132 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Punishment
Reconciliation
Injustice
Transitional Justice
Fundamental

Postcolonial flyover: Above and below in Frank Moraes's the importance of being black (1965)

Burton, A. M., Dec 1 2013, Critical Perspectives on Colonialism: Writing the Empire from Below. Taylor and Francis, p. 219-234 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Quantitative ultrasound history and successes

Ghoshal, G., Oelze, M. L. & O’brien, W. D., Jan 1 2013, Quantitative Ultrasound in Soft Tissues. Springer Netherlands, p. 21-42 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Ultrasonography
History
Equipment and Supplies
Diagnostic Imaging
Medicine

Radiatively important atmospheric constituents

Wuebbles, D. J. & Ciuro, D., Jan 1 2013, Engineering Response to Climate Change, Second Edition. CRC Press, p. 45-80 36 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

atmosphere
Gases
Earth atmosphere
Planets
Greenhouse gases

Rational Design of Protein Cages for Alternative Enzymatic Functions

Marshall, N. M., Miner, K. D., Wilson, T. D. & Lu, Y., Apr 2 2013, Coordination Chemistry in Protein Cages: Principles, Design, and Applications. John Wiley and Sons, p. 111-147 37 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Proteins
Catalysis
Scaffolds
Electrons
Inorganic Chemistry

RNA World

Caetano-Anolles, G., Feb 27 2013, Brenner's Encyclopedia of Genetics: Second Edition. Elsevier Inc., p. 298-300 3 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

RNA
Biochemistry
Molecules
Transcription
Metabolism

Secondary ion mass spectrometry imaging of biological membranes at high spatial resolution

Klitzing, H. A., Weber, P. K. & Kraft, M. L., Jan 1 2013, Nanoimaging: Methods and Protocols. Sousa, A. & Kruhlak, M. (eds.). p. 483-501 19 p. (Methods in Molecular Biology; vol. 950).

Research output: Chapter in Book/Report/Conference proceedingChapter

Secondary Ion Mass Spectrometry
Lipids
Membranes
Sphingolipids
Membrane Lipids