Research Output

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Conference contribution
2019

Aspects of Municipalities Associated with Occupancy and Abundance of Chimney Swifts in Illinois

Hurd, M., Benson, T. J. & Ward, M. P., 2019, Midwest Fish and Wildlife Conference 2019.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Effects of Field and Landscape-scale Habitat on Ring-necked Pheasant Demography

Lyons, T., Benson, T. J., Louis, W., Ward, M. & Warner, R., 2019, Midwest Fish and Wildlife Conference 2019.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Testing the Role of Stream Flow on eDNA Abundance Using the Invasive Asian Clam Corbicula Spp

Davis, M., Curtis, A., Tiemann, J., Douglass, S. & Larson, E., 2019, Midwest Fish and Wildlife Conference 2019.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Brown dog: Making the digital world a better place, a few files at a time

Satheesan, S. P., Galewsky, B., Lee, J. S., Christopher, M., Zhang, B., Alameda, J., Jansen, G., Marciano, R., Schmidt, A. R., Zhao, Y., Bradley, S., Kooper, R., Marini, L., Slavenas, M., Zharnitsky, I., Dietze, M., Kumar, P., Minsker, B. S., Sullivan, W. C. & McHenry, K. G., Jul 22 2018, Practice and Experience in Advanced Research Computing 2018: Seamless Creativity, PEARC 2018. Association for Computing Machinery, a38. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Imaging spectrometry and fluorometry in support of flex: What can we learn from multi-scale experiments?

Gamon, J., Hmimina, G., Miao, G., Guan, K., Springer, K., Wang, R., Yu, R., Gholizadeh, H., Moore, R., Walter-Shea, E., Arkebauer, T., Suyker, A., Franz, T., Wardlow, B. & Wedin, D., Oct 31 2018, 2018 IEEE International Geoscience and Remote Sensing Symposium, IGARSS 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 3931-3934 4 p. 8517861. (International Geoscience and Remote Sensing Symposium (IGARSS); vol. 2018-July).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

Reclamation of prime agricultural farmlands: A retrospective 40 years after reclamation

Darmody, R. G. & McSweeney, K., Jan 1 2017, Land Reclamation in Ecological Fragile Areas - Proceedings of the 2nd International Symposium on Land Reclamation and Ecological Restoration, LRER 2017. Hu, Z. (ed.). CRC Press/Balkema, p. 307-314 8 p. (Land Reclamation in Ecological Fragile Areas - Proceedings of the 2nd International Symposium on Land Reclamation and Ecological Restoration, LRER 2017).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

An architecture for automatic deployment of brown dog services at scale into diverse computing infrastructures

Padhy, S., Alameda, J., Kooper, R., Liu, R., Satheesan, S. P., Zharnitsky, I., Jansen, G., Dietze, M. C., Kumar, P., Lee, J. S., Marciano, R., Marini, L., Minsker, B. S., Navarro, C., Slavenas, M., Sullivan, W. C. & McHenry, K. G., Jul 17 2016, Proceedings of XSEDE 2016: Diversity, Big Data, and Science at Scale. Association for Computing Machinery, a33. (ACM International Conference Proceeding Series; vol. 17-21-July-2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Anthropogenic reorganization of critical zone in intensively managed landscapes

Kumar, P., Anders, A. M., Bettis III, E. A., Blair, N. E., Filley, T. R., Grimley, D. A., Le, P. V., Lin, H., Lin, Y-F. F., Keefer, D. A., Keefer, L. L., Muste, M., Packman, A. I., Papanicolaou, T., Rhoads, B. L., Richardson, M., Schnoebelen, D. J., Stumpf, A., Ward, A. S., Wilson, C. G. & 3 others, Woo, D., Yan, Q. & Goodwell, A. E., 2016, AGU 2016 fall meeting. Vol. 2016.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Assessment of suspended sediment mixing at the confluence of the Mississippi and Missouri rivers using broad-band satellite remote sensing

Umar, M., Rhoads, B. L. & Greenberg, J. A., Jan 1 2016, River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016. Constantinescu, G., Garcia, M. & Hanes, D. (eds.). CRC Press/Balkema, p. 1648-1654 7 p. (River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bed morphology and sedimentology at chute cutoffs: A case study of Mackey Bend, lower Wabash River, IL-IN

LeRoy, J. Z., Rhoads, B. L. & Best, J. L., 2016, River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016. Constantinescu, G., Garcia, M. & Hanes, D. (eds.). CRC Press/Balkema, p. 1736-1742 7 p. (River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Behavioral Genetic Toolkits: Toward the Evolutionary Origins of Complex Phenotypes

Rittschof, C. C. & Robinson, G. E., Jan 1 2016, Genes and Evolution, 2016. Orgogozo, V. (ed.). Academic Press Inc., p. 157-204 48 p. (Current Topics in Developmental Biology; vol. 119).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Flow evolution near the apex of two small stream confluences using large-scale particle image velocimetry

Lewis, Q. W. & Rhoads, B. L., 2016, River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016. Constantinescu, G., Garcia, M. & Hanes, D. (eds.). CRC Press/Balkema, p. 1640-1647 8 p. (River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Relations among mean flow, turbulence, and mixing at a small stream confluence

Rhoads, B. L. & Lewis, Q. W., Jan 1 2016, River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016. Hanes, D., Garcia, M. & Constantinescu, G. (eds.). CRC Press/Balkema, p. 1633-1639 7 p. (River Flow - Proceedings of the International Conference on Fluvial Hydraulics, RIVER FLOW 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

Autocuration cyberinfrastructure for scientific discovery and preservation

Padhy, S., Black, E., Cowdery, B., Diesendruck, L., Dietze, M., Jansen, G., Kooper, R., Kumar, P., Lee, J. S., Liu, R., Marciano, R., Marini, L., Mattson, D., Minsker, B. S., Navarro, C., Rai, A., Slavenas, M., Sullivan, W. C., Votava, J., Yan, Q. & 2 others, Zharnitsky, I. & McHenry, K. G., Oct 22 2015, Proceedings - 11th IEEE International Conference on eScience, eScience 2015. Institute of Electrical and Electronics Engineers Inc., p. 264-267 4 p. 7304301. (Proceedings - 11th IEEE International Conference on eScience, eScience 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brown Dog: Leveraging everything towards autocuration

Padhy, S., Jansen, G., Alameda, J., Black, E., Diesendruck, L., Dietze, M., Kumar, P., Kooper, R., Lee, J. S., Liu, R., Marciano, R., Marini, L., Mattson, D., Minsker, B., Navarro, C., Slavenas, M., Sullivan, W. C., Votava, J., Zharnitsky, I. & McHenry, K. G., Dec 22 2015, Proceedings - 2015 IEEE International Conference on Big Data, IEEE Big Data 2015. Luo, F., Ogan, K., Zaki, M. J., Haas, L., Ooi, B. C., Kumar, V., Rachuri, S., Pyne, S., Ho, H., Hu, X., Yu, S., Hsiao, M. H-I. & Li, J. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 493-500 8 p. 7363791. (Proceedings - 2015 IEEE International Conference on Big Data, IEEE Big Data 2015).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Utilization of river sediments as topsoil to reclaim brownfields and other sites

Darmody, R. G. & Marlin, J. C., 2015, Legislation, Technology and Practice of Mine Land Reclamation - Proceedings of the Beijing International Symposium Land Reclamation and Ecological Restoration, LRER 2014. Hu, Z. (ed.). CRC Press/Balkema, p. 157-162 6 p. (Legislation, Technology and Practice of Mine Land Reclamation - Proceedings of the Beijing International Symposium Land Reclamation and Ecological Restoration, LRER 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014

Capitalizing on the health benefits of berryfruit: Science versus the marketplace

Lila, M. A., Aug 20 2014, II International Symposium on Biotechnology of Fruit Species. Gardiner, S. E. (ed.). International Society for Horticultural Science, p. 123-128 6 p. (Acta Horticulturae; vol. 1048).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Spectroscopic evidence of Pu(IV) favorability on the surfaces of hematite and quartz

Estes, S. L., Hixon, A. E., Arai, Y., Conradson, S. D. & Powell, B. A., Jan 1 2014, Plutonium Futures: The Science 2014. American Nuclear Society, p. 12-13 2 p. (Plutonium Futures: The Science 2014).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2012

Maqui Berry (aristotelia chilensis) juices fermented with yeasts: Effects on phenolic composition, antioxidant capacity, and iNOS and COX-2 protein expression

Wang, J. Z., Yousef, G. G., Rogers, R. B., De Mejia, E. G., Raskin, I. & Lila, M. A., Jan 1 2012, Emerging Trends in Dietary Components for Preventing and Combating Disease. American Chemical Society, p. 95-116 22 p. (ACS Symposium Series; vol. 1093).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

TrueSight: Self-training algorithm for splice junction detection using RNA-seq

Li, Y., Li, H. M., Burns, P., Borodovsky, M., Robinson, G. E. & Ma, J., May 15 2012, Research in Computational Molecular Biology - 16th Annual International Conference, RECOMB 2012, Proceedings. p. 163-164 2 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 7262 LNBI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Apple (Malus × domestica) transcriptome in response to the compatible pathogen Erwinia amylovora and the incompatible pathogen Pseudomonas syringae

Bocsanczya, A. M., Korban, S. S., Phillips, J. G., Dardick, C. D., Bassett, C. L., Wisniewski, M. E. & Norelli, J. L., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 237-242 6 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Comparative analysis of the RcsC sensor kinase from Erwinia amylovora and other enterobacteria

Wang, D. P., Zhao, Y. F. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 165-172 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Mapping genes expressed preferentially in apple rootstocks

Baldo, A. M., Fazio, G., Gasic, K., Wan, Y. & Korban, S., Aug 1 2011, IX International Symposium on Integrating Canopy, Rootstock and Environmental Physiology in Orchard Systems. International Society for Horticultural Science, p. 75-80 6 p. (Acta Horticulturae; vol. 903).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Regulatory genes and environmental regulation of amylovoran biosynthesis in Erwinia amylovora

Wang, D. P., Clough, S. J., Zhao, Y. F., Sundin, G. W., Korban, S. S. & Toth, I. K., May 13 2011, XII International Workshop on Fire Blight. International Society for Horticultural Science, p. 195-202 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Reliability analysis of denitrifying biofilter stability

Bartolerio, N., Rodriguez, L. F., Porter, M., Andrus, J. M., Kent, A. D. & Zilles, J., Jan 1 2011, American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011. SUPPL. ed. American Society of Agricultural and Biological Engineers, p. 12-26 15 p. (American Society of Agricultural and Biological Engineers Annual International Meeting 2011, ASABE 2011; no. SUPPL.).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

To Beijing and back: A midwestern's view of Chinese mine reclamation

Darmody, R. G., 2011, 28th Annual Meeting of the American Society of Mining and Reclamation 2011. American Society of Mining and Reclamation, p. 153-165 13 p. (28th Annual Meeting of the American Society of Mining and Reclamation 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access

Transcriptome analysis of apple blossom after challenging with fire blight pathogen Erwinia amylovora wild type and mutant strains

Sarowar, S., Wang, D. P., Zhao, Y. F., Zheng, D. M., Guerra, R. E. & Korban, S. S., May 13 2011, XII International Workshop on Fire Blight. Sobiczewski, P., Pulawska, J. & Kaluzna, M. (eds.). p. 245-252 8 p. (Acta Horticulturae; vol. 896).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010

Microbial community patterns in tile drain biofilters in Illinois

Andrus, J. M., Rodriguez, L. F., Porter, M., Cooke, R. A. C., Zhang, Y., Kent, A. D. & Zilles, J. L., Dec 1 2010, ASABE - 21st Century Watershed Technology: Improving Water Quality and Environment 2010. p. 26-28 3 p. (ASABE - 21st Century Watershed Technology: Improving Water Quality and Environment 2010).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2009

AdaptSens: An adaptive data collection and storage service for solar-powered sensor networks

Wang, L., Yang, Y., Noh, D. K., Le, H. K., Liu, J., Abdelzaher, T. F. & Ward, M., Dec 1 2009, Proceedings - Real-Time Systems Symposium, RTSS 2009. p. 303-312 10 p. 5368156. (Proceedings - Real-Time Systems Symposium).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evo-devo and the evolution of social behavior: Brain gene expression analyses in social insects

Toth, A. L. & Robinson, G. E., Dec 1 2009, Cold Spring Harbor Symposia on Quantitative Biology. p. 419-426 8 p. (Cold Spring Harbor Symposia on Quantitative Biology; vol. 74).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Genes encoding flavonoid 3'-hydroxylase in apple and their tagged molecular markers

Han, Y. & Korban, S. S., Jan 1 2009, Acta Horticulturae. International Society for Horticultural Science, p. 409-414 6 p. (Acta Horticulturae; vol. 839).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Topsoil: What is it and who cares?

Darmody, R. G., Daniels, W. L., Marlin, J. C. & Cremeens, D. L., Dec 1 2009, 26th Annual Meetings of the American Society of Mining and Reclamation and 11th Billings Land Reclamation Symposium 2009. p. 235-267 33 p. (26th Annual Meetings of the American Society of Mining and Reclamation and 11th Billings Land Reclamation Symposium 2009; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transcriptomic and proteomic response of fruit trees to abiotic stress

Wisniewski, M., Bassett, C., Macarisin, D., Norelli, J., Artlip, T. & Korban, S., Jan 1 2009, Acta Horticulturae. International Society for Horticultural Science, p. 681-687 7 p. (Acta Horticulturae; vol. 839).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2008

Characterization of microorganisms contributing to denitrification in tile drain biofilters in illinois

Malia Appleford, J., Rodriguez, L. F., Cooke, R. A. C., Zhang, Y., Kent, A. D. & Zilles, J., 2008, American Society of Agricultural and Biological Engineers Annual International Meeting 2008, ASABE 2008. American Society of Agricultural and Biological Engineers, Vol. 9. p. 5605-5614 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Illinois River dredged sediment: Characterization and utility for brownfield reclamation

Darmody, R. G. & Marlin, J. C., Dec 1 2008, 25th Annual Meetings of the American Society of Mining and Reclamation and 10th Meeting of IALR 2008. p. 253-270 18 p. (25th Annual Meetings of the American Society of Mining and Reclamation and 10th Meeting of IALR 2008; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Quantifying the timing and location of spawning activity for bonefish in Eleuthera, The Bahamas

Danylchuk, A. J., Adams, A., Cooke, S. J., Suski, C. D., Murchie, K. J., Goldberg, T. L., Danylchuk, S. E., Koppelman, J., Shultz, A., Oronti, A. & Philipp, D. P., 2008, 2008 Symposium.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Thermal infrared detection of simulated CO (sub 2) leakage in cropland; application to post injection deep sequestration; Geological Society of America, North-Central Section, 42nd annual meeting

Stohr, C. J., Darmody, R. G., Wimmer, B. T., Hackley, K. C., Iranmanesh, A., Krapac, I. G., Byers, D. L., Stumpf, A. J., Luman, D. E. & Brown, S. E., 2008, Abstracts with Programs - Geological Society of America. Geological Society of America (GSA), Boulder, CO, United States (USA), Vol. 40. p. 83 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2007

EnviroMic: Towards cooperative storage and retrieval in audio sensor networks

Luo, L., Cao, Q., Huang, C., Abdelzaher, T., Stankovic, J. A. & Ward, M., Oct 8 2007, 27th International Conference on Distributed Computing Systems, ICDCS'07. 4268188. (Proceedings - International Conference on Distributed Computing Systems).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

From beans to berries and beyond: Teamwork between plant chemicals for protection of optimal human health

Lila, M. A., Oct 2007, Healthy Aging and Longevity: Third International Conference. Blackwell Publishing Inc., p. 372-380 9 p. (Annals of the New York Academy of Sciences; vol. 1114).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2006

Sampling designs over time based on spatial variability of images for mapping and monitoring soil erosion cover factor

Wang, G., Anderson, A. B. & Gertner, G., Dec 1 2006, American Society for Photogrammetry and Remote Sensing - Annual Conference of the American Society for Photogrammetry and Remote Sensing 2006: Prospecting for Geospatial Information Integration. p. 1514-1527 14 p. (American Society for Photogrammetry and Remote Sensing - Annual Conference of the American Society for Photogrammetry and Remote Sensing 2006: Prospecting for Geospatial Information Integration; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2005

A spatial dynamic model to simulate population variations and movements within fragmented landscapes

Aurambout, J. P., Endress, A. G. & Deal, B. M., Dec 1 2005, MODSIM05 - International Congress on Modelling and Simulation: Advances and Applications for Management and Decision Making, Proceedings. p. 1339-1345 7 p. (MODSIM05 - International Congress on Modelling and Simulation: Advances and Applications for Management and Decision Making, Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Investigation of the excavation, transport and beneficial use of Illinois river dredged material

Marlin, J. C. & Darmody, R. G., Dec 1 2005, World Water Congress 2005: Impacts of Global Climate Change - Proceedings of the 2005 World Water and Environmental Resources Congress. 1 p. (World Water Congress 2005: Impacts of Global Climate Change - Proceedings of the 2005 World Water and Environmental Resources Congress).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Issues in designing automated minimal resource allocation neural networks

Markus, M., 2005, Proceedings of the International Joint Conference on Neural Networks, IJCNN 2005. Vol. 5. p. 2671-2673 3 p. 1556345

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Rowcrop response to topsoil replacement on high traffic vs low traffic soil reconstruction systems

Dunker, R. E. & Darmody, R. G., Jan 1 2005, 22nd American Society of Mining and Reclamation Annual National Conference 2005. American Society of Mining and Reclamation, p. 302-327 26 p. (22nd American Society of Mining and Reclamation Annual National Conference 2005; vol. 1).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Open Access
2004

Evaluating the regional value of streamgage data in Illinois using a new entropy-based approach

Markus, M. & Knapp, V., Dec 1 2004, Bridging the Gap: Meeting the World's Water and Environmental Resources Challenges - Proceedings of the World Water and Environmental Resources Congress 2001. (Bridging the Gap: Meeting the World's Water and Environmental Resources Challenges - Proceedings of the World Water and Environmental Resources Congress 2001; vol. 111).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Horticulture, well-being, and mental health: From intuitions to evidence

Kuo, F. E., Jan 1 2004, XXVI International Horticultural Congress: Expanding Roles for Horticulture inmproving Human Well-Being and Life Quality. International Society for Horticultural Science, p. 27-34 8 p. (Acta Horticulturae; vol. 639).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Naturalization of urban streams using in-channel structures

Rodríguez, J. F., García, M. H., Bombardelli, F. A., Guzmán, J. M., Rhoads, B. L. & Herricks, E., Dec 1 2004, Joint Conference on Water Resource Engineering and Water Resources Planning and Management 2000: Building Partnerships. (Joint Conference on Water Resource Engineering and Water Resources Planning and Management 2000: Building Partnerships; vol. 104).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2003

Estimating genetic diversity in new guinea impatiens using AFLP markers

Carr, J., Xu, M. & Korban, S. S., Jul 23 2003, XXVI International Horticultural Congress: Plant Genetic Resources, The Fabric of Horticulture's Future. International Society for Horticultural Science, p. 161-168 8 p. (Acta Horticulturae; vol. 623).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Positional cloning of the apple scab resistance gene Vf

Xu, M. & Korban, S. S., Sep 30 2003, XXVI International Horticultural Congress: Biotechnology in Horticultural Crop Improvement: Achievements, Opportunities and Limitations. International Society for Horticultural Science, p. 79-87 9 p. (Acta Horticulturae; vol. 625).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2002

Constructing a bacterial artificial chromosome library of the apple cultivar GoldRush

Xu, M., Korban, S. S., Song, J. & Jiang, J., Jan 1 2002, International Symposium on Apple Breeding for Scab Resistance. International Society for Horticultural Science, p. 103-112 10 p. (Acta Horticulturae; vol. 595).

Research output: Chapter in Book/Report/Conference proceedingConference contribution