Medical Information Science

Research Output

2019

A gap analysis of survivorship terminology: Knowledge resources versus literature usage

Blake, C., Kim, J., Mathur, M. & Aggarwal, A., Jan 1 2019, In : Proceedings of the Association for Information Science and Technology. 56, 1, p. 612-614 3 p.

Research output: Contribution to journalArticle

Open Access

Disparities in breast cancer subtypes among women in the lower Mississippi Delta Region states

Zahnd, W. E., Sherman, R. L., Klonoff-Cohen, H., McLafferty, S. L., Farner, S. & Rosenblatt, K. A., Jun 1 2019, In : Cancer Causes and Control. 30, 6, p. 591-601 11 p.

Research output: Contribution to journalArticle

Evaluating automated entity extraction with respect to drug and non-drug treatment strategies

Guo, J., Blake, C. & Guan, Y., Jun 2019, In : Journal of Biomedical Informatics. 94, 103177.

Research output: Contribution to journalArticle

Evaluating ontology coverage and internal structure to better align patients with clinical trials

Lee, J., Blake, C. & McInnes, B. T., Jan 1 2019, In : Proceedings of the Association for Information Science and Technology. 56, 1, p. 157-165 9 p.

Research output: Contribution to journalArticle

Repurposing: Another R to prioritize in data curation

Twidale, M., Blake, C., Souden, M., Stelmack, J. & Kim, J., Jan 1 2019, In : Proceedings of the Association for Information Science and Technology. 56, 1, p. 785-787 3 p.

Research output: Contribution to journalArticle

2018

Investigating the role of interleukin-1 beta and glutamate in inflammatory bowel disease and epilepsy using discovery browsing

Rindflesch, T. C., Blake, C. L., Cairelli, M. J., Fiszman, M., Zeiss, C. J. & Kilicoglu, H., Dec 27 2018, In : Journal of Biomedical Semantics. 9, 1, 25.

Research output: Contribution to journalArticle

2017

High-frame-rate full-vocal-tract 3D dynamic speech imaging

Fu, M., Barlaz, M. S., Holtrop, J. L., Perry, J. L., Kuehn, D. P., Shosted, R. K., Liang, Z. P. & Sutton, B. P., Apr 1 2017, In : Magnetic Resonance in Medicine. 77, 4, p. 1619-1629 11 p.

Research output: Contribution to journalArticle

Informatics support for basic research in biomedicine

Rindflesch, T. C., Blake, C. L., Fiszman, M., Kilicoglu, H., Rosemblat, G., Schneider, J. A. & Zeiss, C. J., Jul 1 2017, In : ILAR Journal. 58, 1, p. 80-89 10 p., ilx004.

Research output: Contribution to journalArticle

Leveraging syntax to better capture the semantics of elliptical coordinated compound noun phrases

Blake, C. L. & Rindflesch, T., Aug 2017, In : Journal of Biomedical Informatics. 72, p. 120-131 12 p.

Research output: Contribution to journalArticle

Predicting Pulmonary Function from Phone Sensors

Cheng, Q., Juen, J., Bellam, S., Fulara, N., Close, D., Silverstein, J. C. & Schatz, B., Nov 2017, In : Telemedicine and e-Health. 23, 11, p. 913-919 7 p.

Research output: Contribution to journalArticle

Preface

van der Ark, L. A., Wiberg, M., Culpepper, S. A., Douglas, J. A. & Wang, W. C., 2017, In : Springer Proceedings in Mathematics and Statistics. 196, p. v

Research output: Contribution to journalEditorial

2016

Classification Models for Pulmonary Function using Motion Analysis from Phone Sensors

Cheng, Q., Juen, J., Bellam, S., Fulara, N., Close, D., Silverstein, J. C. & Schatz, B., Jan 1 2016, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2016, p. 401-410 10 p.

Research output: Contribution to journalArticle

Improving Endpoint Detection to Support Automated Systematic Reviews

Lucic, A. & Blake, C. L., Jan 1 2016, In : AMIA ... Annual Symposium proceedings. AMIA Symposium. 2016, p. 1900-1909 10 p.

Research output: Contribution to journalArticle

Mining discriminative patterns to predict health status for cardiopulmonary patients

Cheng, Q., Shang, J., Juen, J., Han, J. & Schatz, B., Oct 2 2016, ACM-BCB 2016 - 7th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 41-49 9 p. (ACM-BCB 2016 - 7th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Preparing a workforce to effectively reuse data

Lucic, A. & Blake, C. L., Jan 1 2016, In : Proceedings of the Association for Information Science and Technology. 53, 1, p. 1-10 10 p.

Research output: Contribution to journalArticle

Spatiotemporal-atlas-based dynamic speech imaging

Fu, M., Woo, J., Liang, Z. P. & Sutton, B. P., Jan 1 2016, Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging. Gimi, B. & Krol, A. (eds.). SPIE, 978804. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9788).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

A Natural Walking Monitor for Pulmonary Patients Using Mobile Phones

Juen, J., Cheng, Q. & Schatz, B. R., Jul 1 2015, In : IEEE Journal of Biomedical and Health Informatics. 19, 4, p. 1399-1405 7 p., 7096915.

Research output: Contribution to journalArticle

A syntactic characterization of authorship style surrounding proper names

Lučić, A. & Blake, C. L., Apr 1 2015, In : Digital Scholarship in the Humanities. 30, 1, p. 53-70 18 p.

Research output: Contribution to journalArticle

Automatic endpoint detection to support the systematic review process

Blake, C. & Lucic, A., Aug 1 2015, In : Journal of Biomedical Informatics. 56, p. 42-56 15 p.

Research output: Contribution to journalArticle

Discovering de facto diagnosis specialties

Lu, X., Zhang, A., Gunter, C., Fabbri, D., Liebovitz, D. & Malin, B., Sep 9 2015, BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 7-16 10 p. (BCB 2015 - 6th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Expert-guided contrastive opinion summarization for controversial issues

Guo, J., Lu, Y., Mori, T. & Blake, C., May 18 2015, WWW 2015 Companion - Proceedings of the 24th International Conference on World Wide Web. Association for Computing Machinery, Inc, p. 1105-1110 6 p. (WWW 2015 Companion - Proceedings of the 24th International Conference on World Wide Web).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Guest editorial: Predictive modeling in health informatics

Schatz, B., Jul 1 2015, In : IEEE Journal of Biomedical and Health Informatics. 19, 4, 1 p., 7165719.

Research output: Contribution to journalEditorial

High-resolution dynamic speech imaging with deformation estimation

Fu, M., Barlaz, M. S., Shosted, R. K., Liang, Z. P. & Sutton, B. P., Nov 4 2015, 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. Institute of Electrical and Electronics Engineers Inc., p. 1568-1571 4 p. 7318672. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2015-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

High-resolution dynamic speech imaging with joint low-rank and sparsity constraints

Fu, M., Zhao, B., Carignan, C., Shosted, R. K., Perry, J. L., Kuehn, D. P., Liang, Z. P. & Sutton, B. P., May 1 2015, In : Magnetic Resonance in Medicine. 73, 5, p. 1820-1832 13 p.

Research output: Contribution to journalArticle

National surveys of population health: Big data analytics for mobile health monitors

Schatz, B. R., Dec 1 2015, In : Big Data. 3, 4, p. 219-229 11 p.

Research output: Contribution to journalReview article

Online question answering practices to support healthcare data re-use

Blake, C., Souden, M., Anderson, C. L., Twidale, M. & Jenifer E., S., Jan 1 2015, In : Proceedings of the Association for Information Science and Technology. 52, 1, p. 1-4 4 p.

Research output: Contribution to journalArticle

2014

Detecting privacy-sensitive events in medical text

Jindal, P., Gunter, C. & Roth, D., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 617-620 4 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Exploring cultural differences in language usage: The case of negation

Stoytcheva, S., Cohen, D. & Blake, C., Jan 1 2014, In : Proceedings of the ASIST Annual Meeting. 51, 1

Research output: Contribution to journalArticle

Health monitors for chronic disease by gait analysis with mobile phones

Juen, J., Cheng, Q., Prieto-Centurion, V., Krishnan, J. A. & Schatz, B., Nov 1 2014, In : Telemedicine journal and e-health : the official journal of the American Telemedicine Association. 20, 11, p. 1035-1041 7 p.

Research output: Contribution to journalArticle

Information integration: A case study of air quality in Chicago and St Louis

Lee, J. & Blake, C., Jan 1 2014, In : Proceedings of the ASIST Annual Meeting. 51, 1

Research output: Contribution to journalArticle

Interventions to reduce rehospitalizations after chronic obstructive pulmonary disease exacerbations: A systematic review

Prieto-Centurion, V., Markos, M. A., Ramey, N. I., Gussin, H. A., Nyenhuis, S. M., Joo, M. J., Prasad, B., Bracken, N., DiDomenico, R., Godwin, P. O., Jaffe, H. A., Kalhan, R., Pickard, A. S., Pittendrigh, B. R., Schatz, B., Sullivan, J. L., Thomashow, B. M., Williams, M. V. & Krishnan, J. A., Mar 2014, In : Annals of the American Thoracic Society. 11, 3, p. 417-424 8 p.

Research output: Contribution to journalReview article

Joint inference for end-to-end coreference resolution for clinical notes

Jindal, P., Roth, D. & Gunter, C., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 192-201 10 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Khintchine–Pollaczek formula for random walks whose steps have one geometric tail

Bauer, R. O., Jan 1 2014, In : Annals of Operations Research. 223, 1, p. 109-119 11 p.

Research output: Contribution to journalArticle

Parameter tuning: Exposing the gap between data curation and effective data analytics

Blake, C. & Gabb, H. A., Jan 1 2014, In : Proceedings of the ASIST Annual Meeting. 51, 1

Research output: Contribution to journalArticle

Resolving healthcare forum posts via similar thread retrieval

Cho, J. H. D., Sondhi, P., Zhai, C. & Schatz, B., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 33-42 10 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Security Concerns in Android mHealth Apps

He, D., Naveed, M., Gunter, C. A. & Nahrstedt, K., Jan 1 2014, In : AMIA ... Annual Symposium proceedings / AMIA Symposium. AMIA Symposium. 2014, p. 645-654 10 p.

Research output: Contribution to journalArticle

Towards a natural walking monitor for pulmonary patients using simple smart phones

Juen, J., Cheng, Q. & Schatz, B. R., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 53-62 10 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Using mobile phones to simulate pulse oximeters: Gaitanalysis predicts oxygen saturation

Cheng, Q., Juen, J. & Schatz, B. R., Sep 20 2014, ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics. Association for Computing Machinery, Inc, p. 331-340 10 p. (ACM BCB 2014 - 5th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

Aggregating personal health messages for scalable comparative effectiveness research

Cho, J. H. D., Liao, V. Q. Z., Jiang, Y. & Schatz, B. R., 2013, 2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013. p. 907-916 10 p. (2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

GaitTrack: Health monitoring of body motion from spatio-temporal parameters of simple smart phones

Cheng, Q., Juen, J., Li, Y., Prieto-Centurion, V., Krishnan, J. A. & Schatz, B. R., Nov 28 2013, 2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013. p. 897-906 10 p. (2013 ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics, ACM-BCB 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identity, location, disease and more: Inferring your secrets from android public resources

Zhou, X., Demetriou, S., He, D., Naveed, M., Pan, X., Wang, X. F., Gunter, C. A. & Nahrstedt, K., Dec 9 2013, CCS 2013 - Proceedings of the 2013 ACM SIGSAC Conference on Computer and Communications Security. p. 1017-1028 12 p. (Proceedings of the ACM Conference on Computer and Communications Security).

Research output: Chapter in Book/Report/Conference proceedingConference contribution