Institute for Sustainability, Energy, and Environment

Research Output 1987 2017

2017

3D-Printed Multidrug-Eluting Stent from Graphene-Nanoplatelet-Doped Biodegradable Polymer Composite

Misra, S. K., Ostadhossein, F., Babu, R., Kus, J., Tankasala, D., Sutrisno, A., Walsh, K. A., Bromfield, C. R. & Pan, D. Jun 7 2017 In : Advanced Healthcare Materials. 6, 11, 1700008

Research output: Contribution to journalArticle

Graphite
Stents
Polymers
Cytotoxic T-Lymphocytes
Composite materials

A conundrum for density functional theory: DFT studies may sometimes get the right results for the wrong reasons

Hammes-Schiffer, S. Jan 6 2017 In : Science. 355, 6320, p. 28-29 2 p.

Research output: Contribution to journalReview article

A cyberGIS approach to uncertainty and sensitivity analysis in biomass supply chain optimization

Hu, H., Lin, T., Wang, S. & Rodriguez, L. F. Oct 1 2017 In : Applied Energy. 203, p. 26-40 15 p.

Research output: Contribution to journalArticle

Biomass
biomass
Supply chains
Costs
Uncertainty analysis

A cybergis-jupyter framework for geospatial analytics at scale

Yin, D., Liu, Y., Padmanabhan, A., Terstriep, J., Rush, J. & Wang, S. Jul 9 2017 PEARC 2017 - Practice and Experience in Advanced Research Computing 2017: Sustainability, Success and Impact. Association for Computing Machinery, Vol. Part F128771, a18

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Information science
Information systems
Supercomputers
Cloud computing
Big data

Advances in the development of aptamer drug conjugates for targeted drug delivery

Chen, K., Liu, B., Yu, B., Zhong, W., Lu, Y., Zhang, J., Liao, J., Liu, J., Pu, Y., Qiu, L., Zhang, L., Liu, H. & Tan, W. May 1 2017 In : Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology. 9, 3, e1438

Research output: Contribution to journalReview article

Drug delivery
Starch Gel Electrophoresis
Oligonucleotides
Biomarkers
Medicine

Amplifying Progress toward Multiple Development Goals through Resource Recovery from Sanitation

Trimmer, J. T., Cusick, R. D. & Guest, J. S. Sep 19 2017 In : Environmental Science and Technology. 51, 18, p. 10765-10776 12 p.

Research output: Contribution to journalArticle

sanitation
Sanitation
nutrient
wastewater
electricity

An interactive, extensible environment for power system simulation on the PMU time frame with a cyber security application

Overbye, T. J., Mao, Z., Shetye, K. S. & Weber, J. D. Mar 1 2017 2017 IEEE Texas Power and Energy Conference, TPEC 2017. Institute of Electrical and Electronics Engineers Inc., 7868264

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Data visualization
Testing

Annual Editorial for Chemical Reviews

Hammes-Schiffer, S. Feb 8 2017 In : Chemical Reviews. 117, 3, p. 899 1 p.

Research output: Contribution to journalEditorial

Appreciation of peer reviewers for 2016

Montanari, A., Bahr, J., Blöschl, G., Cai, X., Mackay, D. S., Michalak, A., Rajaram, H. & Sanchez-Vila, X. Jun 1 2017 In : Water Resources Research. 53, 6, p. 4542-4561 20 p.

Research output: Contribution to journalEditorial

water resource
Climate Change
Photosynthesis
Atmosphere
Biochemistry
climate change

Avian and habitat characteristics influence tick infestation among birds in Illinois

Parker, C. M., Miller, J. R., Allan, B. F. & Ginsberg, H. May 1 2017 In : Journal of Medical Entomology. 54, 3, p. 550-558 9 p.

Research output: Contribution to journalArticle

Tick Infestations
Birds
Ecosystem
birds
Ticks

A vision for Water Resources Research

Clark, M. P., Bahr, J. A., Bierkens, M. F. P., Cai, X., Hogue, T. S., Luce, C. H., Lundquist, J. D., Mackay, D. S., van Meerveld, H. J. I., Rajaram, H., Sanchez-Vila, X. & Troch, P. A. 2017 In : Water Resources Research.

Research output: Contribution to journalArticle

water resource

BETYdb: A yield, trait, and ecosystem service database applied to second-generation bioenergy feedstock production

Lebauer, D., Kooper, R., Mulrooney, P., Rohde, S., Wang, D., Long, S. P. & Dietze, M. C. 2017 In : GCB Bioenergy.

Research output: Contribution to journalArticle

biofuels
biofuel
Biofuels
Ecosystems
ecosystems

Biomass and biofuels in China: Toward bioenergy resource potentials and their impacts on the environment

Qin, Z., Zhuang, Q., Cai, X., He, Y., Huang, Y., Jiang, D., Lin, E., Liu, Y., Tang, Y. & Wang, M. Q. 2017 In : Renewable and Sustainable Energy Reviews.

Research output: Contribution to journalArticle

Biofuels
Crops
Biomass
Ecosystems
Ethanol
lipids
Lipids
lipid
Jet fuel
Costs

Biosynthetic approach to modeling and understanding metalloproteins using unnatural amino acids

Yu, Y., Cui, C., Wang, J. & Lu, Y. Feb 1 2017 In : Science China Chemistry. 60, 2, p. 188-200 13 p.

Research output: Contribution to journalReview article

Anthralin
Afferent Loop Syndrome
Electrons

Bottom-Up Strategy To Prepare Nanoparticles with a Single DNA Strand

Xing, H., Bai, Y., Bai, Y., Tan, L. H., Tao, J., Pedretti, B., Vincil, G. A., Lu, Y. & Zimmerman, S. C. Mar 15 2017 In : Journal of the American Chemical Society. 139, 10, p. 3623-3626 4 p.

Research output: Contribution to journalArticle

Nanoparticles
DNA
Myosins
fluorescence
gold

Can integrating wildlife and livestock enhance ecosystem services in central Kenya?

Allan, B. F., Tallis, H., Chaplin-Kramer, R., Huckett, S., Kowal, V. A., Musengezi, J., Okanga, S., Ostfeld, R. S., Schieltz, J., Warui, C. M., Wood, S. A. & Keesing, F. Aug 1 2017 In : Frontiers in Ecology and the Environment. 15, 6, p. 328-335 8 p.

Research output: Contribution to journalArticle

livestock
wildlife
wildlife management
Kenya
savannas

Catalysts by design: The power of theory

Hammes-Schiffer, S. 2017 In : Accounts of Chemical Research. 50, 3, p. 561-566 6 p.

Research output: Contribution to journalReview article

Enzymes
Afferent Loop Syndrome
Bile Pigments
Paraoxon
Gram-Positive Cocci

Causes for adaptation: Access to forests, markets and representation in Eastern Senegal

Faye, P. & Ribot, J. 2017 In : Sustainability (Switzerland). 9, 2, 311

Research output: Contribution to journalArticle

forest
Drought
Disasters
adaptation
cause

Characterization of NiFe oxyhydroxide electrocatalysts by integrated electronic structure calculations and spectroelectrochemistry

Goldsmith, Z. K., Harshan, A. K., Gerken, J. B., Vörös, M., Galli, G., Stahl, S. S. & Hammes-Schiffer, S. Mar 21 2017 In : Proceedings of the National Academy of Sciences of the United States of America. 114, 12, p. 3050-3055 6 p.

Research output: Contribution to journalArticle

Community Psychiatry
Gram-Positive Cocci
Avian Leukosis
Afferent Loop Syndrome
Oxidation-Reduction

Characterizing Vegetation Canopy Structure Using Airborne Remote Sensing Data

Dutta, D., Wang, K., Lee, E., Goodwell, A., Woo, D. K., Wagner, D. & Kumar, P. Feb 1 2017 In : IEEE Transactions on Geoscience and Remote Sensing. 55, 2, p. 1160-1178 19 p., 7762140

Research output: Contribution to journalArticle

leaf area
canopy
vegetation
Transpiration
Incident solar radiation

Communication: Density functional theory embedding with the orthogonality constrained basis set expansion procedure

Culpitt, T., Brorsen, K. R. & Hammes-Schiffer, S. Jun 7 2017 In : Journal of Chemical Physics. 146, 21, 211101

Research output: Contribution to journalArticle

density functional theory
Density functional theory
orthogonality
embedding
expansion

Concerted One-Electron Two-Proton Transfer Processes in Models Inspired by the Tyr-His Couple of Photosystem II

Huynh, M. T., Mora, S. J., Villalba, M., Tejeda-Ferrari, M. E., Liddell, P. A., Cherry, B. R., Teillout, A. L., MacHan, C. W., Kubiak, C. P., Gust, D., Moore, T. A., Hammes-Schiffer, S. & Moore, A. L. May 24 2017 In : ACS Central Science. 3, 5, p. 372-380 9 p.

Research output: Contribution to journalArticle

Phenols
Oxidation-Reduction
Proton transfer
Dance Therapy
Anthralin

Contribution of above- and belowground bioenergy crop residues to soil carbon

Carvalho, J. L. N., Hudiburg, T. W., Franco, H. C. J. & Delucia, E. H. 2017 In : GCB Bioenergy.

Research output: Contribution to journalArticle

soil
Soils
corn
Crops
maize

Convergence characteristics of the variable projection method for mode extraction

Birchfield, A. B. & Overbye, T. J. Mar 1 2017 2017 IEEE Texas Power and Energy Conference, TPEC 2017. Institute of Electrical and Electronics Engineers Inc., 7868265

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Modal analysis
Time series

Critical Zone services as environmental assessment criteria in intensively managed landscapes

Richardson, M. & Kumar, P. Jun 1 2017 In : Earth's Future. 5, 6, p. 617-632 16 p.

Research output: Contribution to journalArticle

production system
maize
agricultural production
ethanol
cost

Crops in silico: Generating virtual crops using an integrative and multi-scale modeling platform

Marshall-Colon, A. , Long, S. P. , Allen, D. K. , Allen, G. , Beard, D. A. , Benes, B. , Von Caemmerer, S. , Christensen, A. J. , Cox, D. J. , Hart, J. C. , Hirst, P. M. , Kannan, K. , Katz, D. S. , Lynch, J. P. , Millar, A. J. , Panneerselvam, B. , Price, N. D. , Prusinkiewicz, P. , Raila, D. , Shekar, R. G. & 9 others Shrivastava, S., Shukla, D., Srinivasan, V., Stitt, M., Turk, M. J., Voit, E. O., Wang, Y., Yin, X. & Zhu, X. G. May 15 2017 In : Frontiers in Plant Science. 8, 786

Research output: Contribution to journalArticle

crops
engineering
ecosystems
plant biology
climate models

Culex Flavivirus during West Nile Virus Epidemic and Interepidemic Years in Chicago, United States

Newman, C. M., Krebs, B. L., Anderson, T. K., Hamer, G. L., Ruiz, M. O., Brawn, J. D., Brown, W. M., Kitron, U. D. & Goldberg, T. L. Aug 1 2017 In : Vector-Borne and Zoonotic Diseases. 17, 8, p. 567-575 9 p.

Research output: Contribution to journalArticle

Flavivirus
West Nile virus
Culex
Culicidae
Viruses

Decreasing, not increasing, leaf area will raise crop yields under global atmospheric change

Srinivasan, V., Kumar, P. & Long, S. P. Apr 1 2017 In : Global Change Biology. 23, 4, p. 1626-1635 10 p.

Research output: Contribution to journalArticle

Crops
crop
leaf area
soybean
food
crop production
biomass
Crops
energy crops
food crops
interaction
Great Britain
mobility
twitter
human being

Development of a practical multicomponent density functional for electron-proton correlation to produce accurate proton densities

Yang, Y., Brorsen, K. R., Culpitt, T., Pak, M. V. & Hammes-Schiffer, S. Sep 21 2017 In : Journal of Chemical Physics. 147, 11, 114113

Research output: Contribution to journalArticle

electrons
protons
Electrons
density functional theory
orbitals

Development of a Three-Dimensional Ray-Tracing Model of Sugarcane Canopy Photosynthesis and Its Application in Assessing Impacts of Varied Row Spacing

Wang, Y., Song, Q., Jaiswal, D., P. de Souza, A., Long, S. P. & Zhu, X. G. Apr 14 2017 In : Bioenergy Research. p. 1-9 9 p.

Research output: Contribution to journalArticle

canopy
row spacing
planting
sugarcane
photosynthesis

DNAzyme sensors for detection of metal ions in the environment and imaging them in living cells

McGhee, C. E., Loh, K. Y. & Lu, Y. Jun 1 2017 In : Current Opinion in Biotechnology. 45, p. 191-201 11 p.

Research output: Contribution to journalReview article

Catalytic DNA
Metals
Ions
Kernicterus
Metal ions

Ecosystem services and tradeoffs in the home food gardens of African American, Chinese-origin and Mexican-origin households in Chicago, IL

Taylor, J. R., Lovell, S. T., Wortman, S. E. & Chan, M. Feb 1 2017 In : Renewable Agriculture and Food Systems. 32, 1, p. 69-86 18 p.

Research output: Contribution to journalArticle

ecosystem services
gardens
households
African Americans
Ecosystem

Editorial for Virtual Issue on Polymer Bioconjugates in Biology and Medicine

Van Hest, J., Sumerlin, B., Anseth, K. S., Shoichet, M. & Hammes-Schiffer, S. Feb 15 2017 In : Bioconjugate Chemistry. 28, 2, p. 282 1 p.

Research output: Contribution to journalEditorial

Medicine
Polymers

Editorial for Virtual Issue on Polymer Bioconjugates in Biology and Medicine

Van Hest, J., Sumerlin, B. S., Anseth, K. S., Shoichet, M. & Hammes-Schiffer, S. Feb 14 2017 In : Macromolecules. 50, 3, p. 713 1 p.

Research output: Contribution to journalEditorial

Medicine
Polymers

Editorial for Virtual Issue on Polymer Bioconjugates in Biology and Medicine

Van Hest, J., Sumerlin, B., Anseth, K. S., Shoichet, M. & Hammes-Schiffer, S. Feb 13 2017 In : Biomacromolecules. 18, 2, p. 315 1 p.

Research output: Contribution to journalEditorial

Medicine
Polymers

Effect of circular permutation on the structure and function of type 1 blue copper center in azurin

Yu, Y., Petrik, I. D., Chacón, K. N., Hosseinzadeh, P., Chen, H., Blackburn, N. J. & Lu, Y. Feb 1 2017 In : Protein Science. 26, 2, p. 218-226 9 p.

Research output: Contribution to journalArticle

Azurin
Copper
Proteins
Electrons
Graduate Medical Education

Effect of Spatial Filtering on Characterizing Soil Properties from Imaging Spectrometer Data

Dutta, D., Kumar, P. & Greenberg, J. A. Sep 1 2017 In : IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing. 10, 9, p. 4149-4170 22 p., 7935357

Research output: Contribution to journalArticle

Soils
spatial resolution
prediction
soil
Birds

Effects of Active Site Mutations on Specificity of Nucleobase Binding in Human DNA Polymerase η

Ucisik, M. N. & Hammes-Schiffer, S. Apr 20 2017 In : Journal of Physical Chemistry B. 121, 15, p. 3667-3675 9 p.

Research output: Contribution to journalArticle

Thymine
DNA-Directed DNA Polymerase
Catalytic Domain
Mutation
Dimers

Elevated CO2 and temperature increase soil C losses from a soybean–maize ecosystem

Black, C. K., Davis, S. C., Hudiburg, T. W., Bernacchi, C. J. & DeLucia, E. H. Jan 1 2017 In : Global Change Biology. 23, 1, p. 435-445 11 p.

Research output: Contribution to journalArticle

soil
Soils
heating
temperature
organic soil
Temperature
Acetanilides
Protons
Anthralin
Isotopes

Enhancing pollination supply in an urban ecosystem through landscape modifications

Davis, A. Y., Lonsdorf, E. V., Shierk, C. R., Matteson, K. C., Taylor, J. R., Lovell, S. T. & Minor, E. S. Jun 1 2017 In : Landscape and Urban Planning. 162, p. 157-166 10 p.

Research output: Contribution to journalArticle

pollination
home garden
pollinator
bee
garden

Enhancing soybean photosynthetic CO2 assimilation using a cyanobacterial membrane protein, ictB

Hay, W. T., Bihmidine, S., Mutlu, N., Hoang, K. L., Awada, T., Weeks, D. P., Clemente, T. E. & Long, S. P. May 1 2017 In : Journal of Plant Physiology. 212, p. 58-68 11 p.

Research output: Contribution to journalArticle

carbon
Soybeans
Membrane Proteins
Carbon
transporters

Environmental indicators reflective of road design in a forested landscape

Neher, D. A., Williams, K. M. & Lovell, S. T. Mar 1 2017 In : Ecosphere. 8, 3, e01734

Research output: Contribution to journalArticle

roads
road
Nematoda
nematode
soil

Equivalent line limit calculation using available thermal transfer capability

Jang, W. & Overbye, T. J. Mar 1 2017 2017 IEEE Texas Power and Energy Conference, TPEC 2017. Institute of Electrical and Electronics Engineers Inc., 7868287

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Evaluating the Development of Biocatalytic Technology for the Targeted Removal of Perchlorate from Drinking Water

Hutchison, J. M., Guest, J. S. & Zilles, J. L. Jun 20 2017 In : Environmental Science and Technology. 51, 12, p. 7178-7186 9 p.

Research output: Contribution to journalArticle

Acyclic Acids
Diaphragmatic Hernia
Costs
ion exchange
cost

Evaluating the impacts of farmers' behaviors on a hypothetical agricultural water market based on double auction

Du, E., Cai, X., Brozović, N. & Minsker, B. May 1 2017 In : Water Resources Research. 53, 5, p. 4053-4072 20 p.

Research output: Contribution to journalArticle

water
market
crop production
irrigation
rent seeking