Research Output 1965 2020

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Review article
2008

Strain induced semiconductor nanotubes: From formation process to device applications

Li, X., Oct 7 2008, In : Journal of Physics D: Applied Physics. 41, 19, 193001.

Research output: Contribution to journalReview article

Nanotubes
nanotubes
Semiconductor materials
Nanophotonics
Nanoelectronics

Targeted magnetic iron oxide nanoparticles for tumor imaging and therapy

Peng, X. H., Qian, X., Mao, H., Wang, A. Y., Chen, Z. G., Nie, S. & Shin, D. M., Nov 4 2008, In : International journal of nanomedicine. 3, 3, p. 311-321 11 p.

Research output: Contribution to journalReview article

Iron oxides
Nanoparticles
Tumors
Imaging techniques
Neoplasms

Targeting RNA with small molecules

Thomas, J. R. & Hergenrother, P. J., Apr 1 2008, In : Chemical reviews. 108, 4, p. 1171-1224 54 p.

Research output: Contribution to journalReview article

RNA
Molecules
Ligands
Macromolecules
Cell culture

Therapeutic nanoparticles for drug delivery in cancer

Cho, K., Wang, X., Nie, S., Chen, Z. & Shin, D. M., Mar 1 2008, In : Clinical Cancer Research. 14, 5, p. 1310-1316 7 p.

Research output: Contribution to journalReview article

Nanoparticles
Pharmaceutical Preparations
Neoplasms
Therapeutics
Tumor Microenvironment

The sixth data release of the sloan digital sky survey

Adelman-McCarthy, J. K., Agüeros, M. A., Allam, S. S., Prieto, C. A., Anderson, K. S. J., Anderson, S. F., Annis, J., Bahcall, N. A., Bailer-Jones, C. A. L., Baldry, I. K., Barentine, J. C., Bassett, B. A., Becker, A. C., Beers, T. C., Bell, E. F., Berlind, A. A., Bernardi, M., Blanton, M. R., Bochanski, J. J., Boroski, W. N. & 143 others, Brinchmann, J., Brinkmann, J., Brunner, R. J., Budavári, T., Carliles, S., Carr, M. A., Castander, F. J., Cinabro, D., Cool, R. J., Covey, K. R., Csabai, I., Cunha, C. E., Davenport, J. R. A., Dilday, B., Doi, M., Eisenstein, D. J., Evans, M. L., Fan, X., Finkbeiner, D. P., Friedman, S. D., Frieman, J. A., Fukugita, M., Gänsicke, B. T., Gates, E., Gillespie, B., Glazebrook, K., Gray, J., Grebel, E. K., Gunn, J. E., Gurbani, V. K., Hall, P. B., Harding, P., Harvanek, M., Hawley, S. L., Hayes, J., Heckman, T. M., Hendry, J. S., Hindsley, R. B., Hirata, C. M., Hogan, C. J., Hogg, D. W., Hyde, J. B., Ichikawa, S. I., Ivezić, Ž., Jester, S., Johnson, J. A., Jorgensen, A. M., Jurić, M., Kent, S. M., Kessler, R., Kleinman, S. J., Knapp, G. R., Krön, R. G., Krzesinski, J., Kuropatkin, N., Lamb, D. Q., Lampeitl, H., Lebedeva, S., Lee, Y. S., Leger, R. F., Lépine, S., Lima, M., Lin, H., Long, D. C., Loomis, C. P., Loveday, J., Lupton, R. H., Malanushenko, O., Malanushenko, V., Mandelbaum, R., Margon, B., Marriner, J. P., Martínez-Delgado, D., Matsubara, T., McGehee, P. M., McKay, T. A., Meiksin, A., Morrison, H. L., Munn, J. A., Nakajima, R., Neilsen, E. H., Newberg, H. J., Nichol, R. C., Nicinski, T., Nieto-Santisteban, M., Nitta, A., Okamura, S., Owen, R., Oyaizu, H., Padmanabhan, N., Pan, K., Park, C., Peoples, J., Pier, J. R., Pope, A. C., Purger, N., Raddick, M. J., Fiorentin, P. R., Richards, G. T., Richmond, M. W., Riess, A. G., Rix, H. W., Rockosi, C. M., Sako, M., Schlegel, D. J., Schneider, D. P., Schreiber, M. R., Schwope, A. D., Seljak, U., Sesar, B., Sheldon, E., Shimasaku, K., Sivarani, T., Smith, J. A., Snedden, S. A., Steinmetz, M., Strauss, M. A., Subbarao, M., Suto, Y., Szalay, A. S., Szapudi, I., Szkody, P., Tegmark, M., Thakar, A. R., Tremonti, C. A., Tucker, D. L., Uomoto, A., Vanden Berk, D. E., Vandenberg, J., Vidrih, S., Vogeley, M. S., Voges, W., Vogt, N. P., Wadadekar, Y., Weinberg, D. H., West, A. A., White, S. D. M., Wilhite, B. C., Yanny, B., Yocum, D. R., York, D. G., Zehavi, I. & Zucker, D. B., Apr 2008, In : Astrophysical Journal, Supplement Series. 175, 2, p. 297-313 17 p.

Research output: Contribution to journalReview article

sky
galaxies
subtraction
stellar temperature
stars

The utility of behavioral models and modules in molecular analyses of social behavior

Barron, A. B. & Robinson, G. E., Apr 1 2008, In : Genes, Brain and Behavior. 7, 3, p. 257-265 9 p.

Research output: Contribution to journalReview article

Social Behavior
Space Simulation
Molecular Probes
Reward
Motivation

Using VMD: An introductory tutorial

Hsin, J., Arkhipov, A., Yin, Y., Stone, J. E. & Schulten, K., Dec 1 2008, In : Current Protocols in Bioinformatics. SUPPL. 24, p. 5.7.1-5.7.48

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Molecular dynamics
Drawing (graphics)
Lipid bilayers
Lipid Bilayers

What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?

Zhu, X. G., Long, S. P. & Ort, D. R., Apr 1 2008, In : Current Opinion in Biotechnology. 19, 2, p. 153-159 7 p.

Research output: Contribution to journalReview article

Solar Energy
Photosynthesis
Biomass
Solar energy
Economic Development
2009

Advances in imaging secondary ion mass spectrometry for biological samples

Boxer, S. G., Kraft, M. L. & Weber, P. K., Nov 27 2009, In : Annual Review of Biophysics. 38, 1, p. 53-74 22 p.

Research output: Contribution to journalReview article

Secondary Ion Mass Spectrometry
Secondary ion mass spectrometry
Mass spectrometry
Mass Spectrometry
Imaging techniques

Agronomic experiences with Miscanthus x giganteus in Illinois, USA.

Pyter, R., Heaton, E., Dohleman, F., Voigt, T. & Long, S., 2009, In : Methods in molecular biology (Clifton, N.J.). 581, p. 41-52 12 p.

Research output: Contribution to journalReview article

Biomass
Poaceae
Rhizome
Research
Japan

A method for performing fully quantum mechanical simulations of gated silicon quantum wire structures

Akis, R., Ferry, D. K. & Gilbert, M. J., Jul 17 2009, In : Journal of Computational Electronics. 8, 2, p. 78-89 12 p.

Research output: Contribution to journalReview article

Quantum Wires
Semiconductor quantum wires
Silicon
quantum wires
Transistors
chronic diseases
human diseases
cancer
Chronic Disease
Animal Models

A review on polymer heat exchangers for HVAC&R applications

T'Joen, C., Park, Y., Wang, Q., Sommers, A., Han, X. & Jacobi, A. M., Aug 1 2009, In : International Journal of Refrigeration. 32, 5, p. 763-779 17 p.

Research output: Contribution to journalReview article

Heat exchangers
Polymer matrix composites
Materials properties
Polymers
Waste heat utilization

Atmospheric composition change: Climate-Chemistry interactions

Isaksen, I. S. A., Granier, C., Myhre, G., Berntsen, T. K., Dalsøren, S. B., Gauss, M., Klimont, Z., Benestad, R., Bousquet, P., Collins, W., Cox, T., Eyring, V., Fowler, D., Fuzzi, S., Jöckel, P., Laj, P., Lohmann, U., Maione, M., Monks, P., Prevot, A. S. H. & 11 others, Raes, F., Richter, A., Rognerud, B., Schulz, M., Shindell, D., Stevenson, D. S., Storelvmo, T., Wang, W. C., van Weele, M., Wild, M. & Wuebbles, D., Oct 1 2009, In : Atmospheric Environment. 43, 33, p. 5138-5192 55 p.

Research output: Contribution to journalReview article

climate change
climate
oxidation
climate effect
atmosphere-biosphere interaction

Biological Timekeeping

Gillette, M. L. & Abbott, S. M., Jun 1 2009, In : Sleep Medicine Clinics. 4, 2, p. 99-110 12 p.

Research output: Contribution to journalReview article

Biological Clocks
Circadian Clocks
Neurobiology
Periodicity
Sleep

Characterizing intercellular signaling peptides in drug addiction

Romanova, E. V., Hatcher, N. G., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2009, In : Neuropharmacology. 56, SUPPL. 1, p. 196-204 9 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Peptides
National Institute on Drug Abuse (U.S.)
Technology
Immunochemistry

Clustering of low-redshift (z ≤ 2.2) quasars from the sloan digital sky survey

Ross, N. P., Shen, Y., Strauss, M. A., Vanden Berk, D. E., Connolly, A. J., Richards, G. T., Schneider, D. P., Weinberg, D. H., Hall, P. B., Bahcall, N. A. & Brunner, R. J., Jan 1 2009, In : Astrophysical Journal. 697, 2, p. 1634-1655 22 p.

Research output: Contribution to journalReview article

quasars
halos
cosmology
dark matter
dimensional measurement

Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment

Phan, J. H., Moffitt, R. A., Stokes, T. H., Liu, J., Young, A. N., Nie, S. & Wang, M. D., Jun 1 2009, In : Trends in Biotechnology. 27, 6, p. 350-358 9 p.

Research output: Contribution to journalReview article

Nanotechnology
Oncology
Biomarkers
Bioinformatics
Tumor Biomarkers

Design of functional metalloproteins

Lu, Y., Yeung, N., Sieracki, N. & Marshall, N. M., Aug 13 2009, In : Nature. 460, 7257, p. 855-862 8 p.

Research output: Contribution to journalReview article

Metalloproteins
Photosynthesis
Computational Biology
Water
Pharmaceutical Preparations

Development of multifunctional nanoparticles for targeted drug delivery and noninvasive imaging of therapeutic effect

Sajja, H. K., East, M. P., Mao, H., Wang, Y. A., Nie, S. & Yang, L., Mar 1 2009, In : Current Drug Discovery Technologies. 6, 1, p. 43-51 9 p.

Research output: Contribution to journalReview article

Therapeutic Uses
Nanoparticles
Pharmaceutical Preparations
Nanomedicine
Neoplasms

Discovery Through the Computational Microscope

Lee, E. H., Hsin, J., Sotomayor, M., Comellas, G. & Schulten, K., Oct 14 2009, In : Structure. 17, 10, p. 1295-1306 12 p.

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Ankyrins
Connectin
Cadherins
Fibrinogen

FRET and mechanobiology

Wang, Y. & Wang, N., Dec 1 2009, In : Integrative Biology. 1, 10, p. 565-573 9 p.

Research output: Contribution to journalReview article

Biophysics
Fluorescence Resonance Energy Transfer
Biosensing Techniques
Biosensors
Proteins

Imaging engineered tissues using structural and functional optical coherence tomography

Liang, X., Graf, B. W. & Boppart, S. A., Nov 1 2009, In : Journal of Biophotonics. 2, 11, p. 643-655 13 p.

Research output: Contribution to journalReview article

Optical tomography
Optical Coherence Tomography
tomography
Tissue
Imaging techniques

Industrial biotechnology: Tools and applications

Tang, W. L. & Zhao, H., Dec 1 2009, In : Biotechnology Journal. 4, 12, p. 1725-1739 15 p.

Research output: Contribution to journalReview article

Biotechnology
Synthetic Biology
Industrial Waste
Metabolic Engineering
Protein Engineering

International Journal of Adaptive Control and Signal Processing: Editorial

Bentsman, J. & Orlov, Y., Feb 1 2009, In : International Journal of Adaptive Control and Signal Processing. 23, 2, p. 111-113 3 p.

Research output: Contribution to journalReview article

Signal processing
Fault detection

Mechanics of stretchable inorganic electronic materials

Song, J., Jiang, H., Huang, Y. & Rogers, J. A., Sep 21 2009, In : Journal of Vacuum Science and Technology A: Vacuum, Surfaces and Films. 27, 5, p. 1107-1125 19 p.

Research output: Contribution to journalReview article

Mechanics
inorganic materials
electronics
ribbons
mesh

Mechanobiology of the skeleton

Turner, C. H., Warden, S. J., Bellido, T., Plotkin, L. I., Kumar, N., Jasiuk, I., Danzig, J. & Robling, A. G., Apr 28 2009, In : Science Signaling. 2, 68, p. pt3

Research output: Contribution to journalReview article

Biophysics
Skeleton
Bone
Bone and Bones
Osteocytes

Modelling of high-enthalpy, high-Mach number flows

Degrez, G., Lani, A., Panesi, M., Chazot, O. & Deconinck, H., Nov 9 2009, In : Journal of Physics D: Applied Physics. 42, 19, 194004.

Research output: Contribution to journalReview article

Mach number
Enthalpy
enthalpy
chemical equilibrium
hypersonic reentry

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Molecular Dynamics Simulation
Ion Channels
Aquaporins
Proteins

Nomenclature for factors of the SLA system, update 2008

Ho, C. S., Lunney, J. K., Ando, A., Rogel-Gaillard, C., Lee, J. H., Schook, L. B. & Smith, D. M., Apr 2009, In : Tissue Antigens. 73, 4, p. 307-315 9 p.

Research output: Contribution to journalReview article

Terminology
Alleles
swine leukocyte antigen
Databases
Major Histocompatibility Complex

Programming structure into 3D nanomaterials

Van Gough, D., Juhl, A. T. & Braun, P. V., Jun 1 2009, In : Materials Today. 12, 6, p. 28-35 8 p.

Research output: Contribution to journalReview article

solar energy
energy storage
programming
Nanostructured materials
delivery

Protein dynamics: From molecules, to interactions, to biology

Gruebele, M., Mar 1 2009, In : International journal of molecular sciences. 10, 3, p. 1360-1368 9 p.

Research output: Contribution to journalReview article

biology
proteins
Proteins
Molecules
molecules

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein Engineering
Biofuels
Microorganisms
Enzymes
Proteins

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Membrane Proteins
Peptide Hydrolases
Membrane Microdomains

Recognizing textual entailment: Rational, evaluation and approaches

Dagan, I., Dolan, B., Magnini, B. & Roth, D., Oct 2009, In : Natural Language Engineering. 15, 4

Research output: Contribution to journalReview article

Knowledge representation
learning method
language
evaluation
Semantics

Segmental dynamics in polymers: From cold melts to ageing and stressed glasses

Chen, K., Saltzman, E. J. & Schweizer, K. S., Dec 18 2009, In : Journal of Physics Condensed Matter. 21, 50, 503101.

Research output: Contribution to journalReview article

Polymers
Aging of materials
Glass
glass
polymers

The parallelization of video processing: From programming models to applications

Lin, D., Huang, X., Nguyen, Q., Blackburn, J., Rodrigues, C., Huang, T. S., Do, M. N., Patel, S. J. & Hwu, W-M. W., Jan 1 2009, In : IEEE Signal Processing Magazine. 26, 6, p. 103-112 10 p.

Research output: Contribution to journalReview article

Video Processing
Parallelization
Programming Model
Digital Video
Processing

Ultrathin films of single-walled carbon nanotubes for electronics and sensors: A review of fundamental and applied aspects

Cao, Q. & Rogers, J. A., Jan 5 2009, In : Advanced Materials. 21, 1, p. 29-53 25 p.

Research output: Contribution to journalReview article

Ultrathin films
Single-walled carbon nanotubes (SWCN)
Electronic equipment
Sensors
Optoelectronic devices
2010

A global-local approach to nonlinear system identification: A review

Lee, Y. S., Vakakis, A. F., McFarland, D. M. & Bergman, L., Nov 1 2010, In : Structural Control and Health Monitoring. 17, 7, p. 742-760 19 p.

Research output: Contribution to journalReview article

Nonlinear systems
Identification (control systems)
Dynamical systems
Time series
Decomposition

An experimental methodology to relate local strain to microstructural texture

Carroll, J., Abuzaid, W., Lambros, J. & Sehitoglu, H., Aug 1 2010, In : Review of Scientific Instruments. 81, 8, 083703.

Research output: Contribution to journalReview article

textures
Textures
methodology
strain measurement
Strain measurement

Anisotropic nanocrystal heterostructures: Synthesis and lattice strain

Shim, M. & McDaniel, H., Oct 2010, In : Current Opinion in Solid State and Materials Science. 14, 5, p. 83-94 12 p.

Research output: Contribution to journalReview article

Crystal lattices
Nanocrystals
Heterojunctions
Nanocrystalline materials
Hybrid materials

A novel platform for in situ investigation of cells and tissues under mechanical strain

Ahmed, W. W., Kural, M. H. & Saif, M. T. A., Aug 2010, In : Acta Biomaterialia. 6, 8, p. 2979-2990 12 p.

Research output: Contribution to journalReview article

Tissue
Fibroblasts
Actins
Embryonic Structures
Drosophila

Approaches to multimodality imaging of angiogenesis

Dobrucki, L. W., De Muinck, E. D., Lindner, J. R. & Sinusas, A. J., Dec 1 2010, In : Journal of Nuclear Medicine. 51, SUPPL.1, p. 66S-79S

Research output: Contribution to journalReview article

Microvessels
Perfusion

A review of new analytic techniques for quantifying symmetry in locomotion

Hsiao-Wecksler, E. T., Polk, J. D., Rosengren, K. S., Sosnoff, J. J. & Hong, S., Jun 1 2010, In : Symmetry. 2, 2, p. 1135-1155 21 p.

Research output: Contribution to journalReview article

Wheelchairs
locomotion
Locomotion
Propulsion
Data acquisition

Brunswikian theory and method as a foundation for simulation-based research on clinical judgment

Kirlik, A., Oct 1 2010, In : Simulation in Healthcare. 5, 5, p. 255-259 5 p.

Research output: Contribution to journalReview article

Medical Education
Medical education
Manikins
Health Knowledge, Attitudes, Practice
Clinical Competence

Capturing functional motions of membrane channels and transporters with molecular dynamics simulation

Shaikh, S. A., Wen, P. C., Enkavi, G., Huang, Z. & Tajkhorshid, E., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2481-2500 20 p.

Research output: Contribution to journalReview article

transporter
Membrane Transport Proteins
Ion Channels
Molecular Dynamics Simulation
Molecular dynamics

Ceramics and ceramic matrix composites for heat exchangers in advanced thermal systems-A review

Sommers, A., Wang, Q., Han, X., T'Joen, C., Park, Y. & Jacobi, A. M., Aug 1 2010, In : Applied Thermal Engineering. 30, 11-12, p. 1277-1291 15 p.

Research output: Contribution to journalReview article

Ceramic matrix composites
Heat exchangers
Tubes (components)
Materials science
Ceramic materials

Dynamic optical coherence elastography: A review

Liang, X., Crecea, V. & Boppart, S. A., Oct 1 2010, In : Journal of Innovative Optical Health Sciences. 3, 4, p. 221-233 13 p.

Research output: Contribution to journalReview article

Elasticity Imaging Techniques
Tissue
Imaging techniques
biodynamics
Biomechanics

Electroreduction of dioxygen for fuel-cell applications: Materials and challenges

Gewirth, A. A. & Thorum, M. S., Apr 19 2010, In : Inorganic Chemistry. 49, 8, p. 3557-3566 10 p.

Research output: Contribution to journalReview article

fuel cells
Fuel cells
Oxygen
Chalcogenides
Catalysts

Enzymatic corn wet milling process: Enzyme optimization & commercial trial

Singh, V., Johnston, D. B. & Neoh, S. L., Feb 1 2010, In : Industrial Biotechnology. 6, 1, p. 34-40 7 p.

Research output: Contribution to journalReview article

Starch
Zea mays
Enzymes
Peptide Hydrolases
Sulfur Dioxide