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2018

Earth BioGenome Project: Sequencing life for the future of life

Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., Durbin, R., Edwards, S. V., Forest, F., Gilbert, M. T. P., Goldstein, M. M., Grigoriev, I. V., Hackett, K. J., Haussler, D., Jarvis, E. D., Johnson, W. E., Patrinos, A., Richards, S., Castilla-Rubio, J. C., Van Sluys, M. A. & 4 others, Soltis, P. S., Xu, X., Yang, H. & Zhang, G., Apr 24 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4325-4333 9 p.

Research output: Contribution to journalReview article

Editorial: Building strategies for porcine cancer models

Collares, T., Seixas, F. K., Rund, L. A. & Schook, L. B., Oct 2 2018, In : Frontiers in Genetics. 9, OCT, 377.

Research output: Contribution to journalReview article

Elastic Fluctuations and Structural Heterogeneities in Metallic Glasses

Liu, C. & Maaß, R., Jul 25 2018, In : Advanced Functional Materials. 28, 30, 1800388.

Research output: Contribution to journalReview article

Emergence of two near-infrared windows for in vivo and intraoperative SERS

Lane, L. A., Xue, R. & Nie, S., Aug 2018, In : Current Opinion in Chemical Biology. 45, p. 95-103 9 p.

Research output: Contribution to journalReview article

Engineering Polymersomes for Diagnostics and Therapy

Leong, J., Teo, J. Y., Aakalu, V. K., Yang, Y. Y. & Kong, H., Apr 25 2018, In : Advanced Healthcare Materials. 7, 8, 1701276.

Research output: Contribution to journalReview article

Engineering the Surface of Therapeutic "living" Cells

Park, J., Andrade, B., Seo, Y., Kim, M. J., Zimmerman, S. C. & Kong, H., Feb 28 2018, In : Chemical reviews. 118, 4, p. 1664-1690 27 p.

Research output: Contribution to journalReview article

Escapement mechanisms and the conversion of disequilibria; the engines of creation

Branscomb, E., Biancalani, T., Goldenfeld, N. & Russell, M., Mar 17 2018, In : Physics Reports. 677, p. 1-60 60 p.

Research output: Contribution to journalReview article

Evaluation of low-temperature cracking performance of asphalt pavements using Acoustic Emission: A review

Behnia, B., Buttlar, W. & Reis, H., Feb 21 2018, In : Applied Sciences (Switzerland). 8, 2, 306.

Research output: Contribution to journalReview article

Fatigue behavior of high-entropy alloys: A review

Chen, P. Y., Lee, C., Wang, S. Y., Seifi, M., Lewandowski, J. J., Dahmen, K. A., Jia, H. L., Xie, X., Chen, B. L., Yeh, J. W., Tsai, C. W., Yuan, T. & Liaw, P. K., Feb 1 2018, In : Science China Technological Sciences. 61, 2, p. 168-178 11 p.

Research output: Contribution to journalReview article

From High-Level Specification to High-Performance Code

Franchetti, F., Moura, J. M. F., Padua, D. A. & Dongarra, J., Nov 2018, In : Proceedings of the IEEE. 106, 11, p. 1875-1878 4 p., 8510981.

Research output: Contribution to journalReview article

Gasification of biowaste: A critical review and outlooks

Watson, J., Zhang, Y., Si, B., Chen, W. T. & de Souza, R., Mar 2018, In : Renewable and Sustainable Energy Reviews. 83, p. 1-17 17 p.

Research output: Contribution to journalReview article

Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality

Jones, B. M. & Robinson, G. E., Dec 2018, In : Journal of Experimental Biology. 221, 23, jeb153163.

Research output: Contribution to journalReview article

How does solvation in the cell affect protein folding and binding?

Davis, C. M., Gruebele, M. & Sukenik, S., Feb 2018, In : Current Opinion in Structural Biology. 48, p. 23-29 7 p.

Research output: Contribution to journalReview article

How many human proteoforms are there?

Aebersold, R., Agar, J. N., Amster, I. J., Baker, M. S., Bertozzi, C. R., Boja, E. S., Costello, C. E., Cravatt, B. F., Fenselau, C., Garcia, B. A., Ge, Y., Gunawardena, J., Hendrickson, R. C., Hergenrother, P. J., Huber, C. G., Ivanov, A. R., Jensen, O. N., Jewett, M. C., Kelleher, N. L., Kiessling, L. L. & 33 others, Krogan, N. J., Larsen, M. R., Loo, J. A., Ogorzalek Loo, R. R., Lundberg, E., Maccoss, M. J., Mallick, P., Mootha, V. K., Mrksich, M., Muir, T. W., Patrie, S. M., Pesavento, J. J., Pitteri, S. J., Rodriguez, H., Saghatelian, A., Sandoval, W., Schlüter, H., Sechi, S., Slavoff, S. A., Smith, L. M., Snyder, M. P., Thomas, P. M., Uhlén, M., Van Eyk, J. E., Vidal, M., Walt, D. R., White, F. M., Williams, E. R., Wohlschlager, T., Wysocki, V. H., Yates, N. A., Young, N. L. & Zhang, B., Feb 14 2018, In : Nature chemical biology. 14, 3, p. 206-214 9 p.

Research output: Contribution to journalReview article

Inferring Nighttime Ionospheric Parameters with the Far Ultraviolet Imager Onboard the Ionospheric Connection Explorer

Kamalabadi, F., Qin, J., Harding, B. J., Iliou, D., Makela, J. J., Meier, R. R., England, S. L., Frey, H. U., Mende, S. B. & Immel, T. J., Jun 1 2018, In : Space Science Reviews. 214, 4, 70.

Research output: Contribution to journalReview article

Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences

Wrobel, T. P. & Bhargava, R., Feb 6 2018, In : Analytical chemistry. 90, 3, p. 1444-1463 20 p.

Research output: Contribution to journalReview article

Innovations in CRISPR technology

Brooks, A. K. & Gaj, T., Aug 2018, In : Current Opinion in Biotechnology. 52, p. 95-101 7 p.

Research output: Contribution to journalReview article

Intraoperative fluorescence imaging in thoracic surgery

Newton, A. D., Predina, J. D., Nie, S., Low, P. S. & Singhal, S., Aug 1 2018, In : Journal of Surgical Oncology. 118, 2, p. 344-355 12 p.

Research output: Contribution to journalReview article

Joint spectral characterization of photon-pair sources

Zielnicki, K., Garay-Palmett, K., Cruz-Delgado, D., Cruz-Ramirez, H., O’Boyle, M. F., Fang, B., Lorenz, V. O., U’Ren, A. B. & Kwiat, P. G., Jun 7 2018, In : Journal of Modern Optics. 65, 10, p. 1141-1160 20 p.

Research output: Contribution to journalReview article

Labeling for Quantitative Comparison of Imaging Measurements in Vitro and in Cells

Davis, C. M. & Gruebele, M., Apr 3 2018, In : Biochemistry. 57, 13, p. 1929-1938 10 p.

Research output: Contribution to journalReview article

Light-emitting diodes of colloidal quantum dots and nanorod heterostructures for future emissive displays

Jiang, Y., Cho, S. Y. & Shim, M., Jan 1 2018, In : Journal of Materials Chemistry C. 6, 11, p. 2618-2634 17 p.

Research output: Contribution to journalReview article

Machine learning and data science in soft materials engineering

Ferguson, A. L., Jan 31 2018, In : Journal of Physics Condensed Matter. 30, 4, 043002.

Research output: Contribution to journalReview article

Managing water on heat transfer surfaces: A critical review of techniques to modify surface wettability for applications with condensation or evaporation

Edalatpour, M., Liu, L., Jacobi, A. M., Eid, K. F. & Sommers, A. D., Jul 15 2018, In : Applied Energy. 222, p. 967-992 26 p.

Research output: Contribution to journalReview article

Materials for optical fiber lasers: A review

Dragic, P. D., Cavillon, M. & Ballato, J., Dec 1 2018, In : Applied Physics Reviews. 5, 4, 041301.

Research output: Contribution to journalReview article

Microbial conversion of xylose into useful bioproducts

Jagtap, S. S. & Rao, C. V., Nov 1 2018, In : Applied Microbiology and Biotechnology. 102, 21, p. 9015-9036 22 p.

Research output: Contribution to journalReview article

Micro-plasticity and recent insights from intermittent and small-scale plasticity

Maaß, R. & Derlet, P. M., Jan 15 2018, In : Acta Materialia. 143, p. 338-363 26 p.

Research output: Contribution to journalReview article

Microscopic view of lipids and their diverse biological functions

Wen, P. C., Mahinthichaichan, P., Trebesch, N., Jiang, T., Zhao, Z., Shinn, E., Wang, Y., Shekhar, M., Kapoor, K., Chan, C. K. & Tajkhorshid, E., Aug 2018, In : Current Opinion in Structural Biology. 51, p. 177-186 10 p.

Research output: Contribution to journalReview article

Multichannel spectrometers in animals

Cronin, T. W., Garcia, M. & Gruev, V., Mar 2018, In : Bioinspiration and Biomimetics. 13, 2, 021001.

Research output: Contribution to journalReview article

Nonlinear distribution of sediment at river diversions: Brief history of the bulle effect and its implications

Dutta, S. & Garcia, M. H., May 1 2018, In : Journal of Hydraulic Engineering. 144, 5, 06118001.

Research output: Contribution to journalReview article

Nonprecious Metal Catalysts for Oxygen Reduction in Heterogeneous Aqueous Systems

Gewirth, A. A., Varnell, J. A. & Diascro, A. M., Mar 14 2018, In : Chemical reviews. 118, 5, p. 2313-2339 27 p.

Research output: Contribution to journalReview article

Of Mice, Dogs, Pigs, and Men: Choosing the Appropriate Model for Immuno-Oncology Research

Overgaard, N. H., Fan, T. M., Schachtschneider, K. M., Principe, D. R., Schook, L. B. & Jungersen, G., Dec 31 2018, In : ILAR Journal. 59, 3, p. 247-262 16 p.

Research output: Contribution to journalReview article

Plasmonic nano-arrays for ultrasensitive bio-sensing

Jiang, J., Wang, X., Li, S., Ding, F., Li, N., Meng, S., Li, R., Qi, J., Liu, Q. & Liu, G. L., Jan 1 2018, In : Nanophotonics. 7, 9, p. 1517-1531 15 p.

Research output: Contribution to journalReview article

Point-of-care sensors for the management of sepsis

Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In : Nature biomedical engineering. 2, 9, p. 640-648 9 p.

Research output: Contribution to journalReview article

Potential lymphangiogenesis therapies: Learning from current antiangiogenesis therapies—A review

Yamakawa, M., Doh, S. J., Santosa, S. M., Montana, M., Qin, E. C., Kong, H., Han, K. Y., Yu, C., Rosenblatt, M. I., Kazlauskas, A., Chang, J. H. & Azar, D. T., Nov 2018, In : Medicinal Research Reviews. 38, 6, p. 1769-1798 30 p.

Research output: Contribution to journalReview article

Primary radiation damage: A review of current understanding and models

Nordlund, K., Zinkle, S. J., Sand, A. E., Granberg, F., Averback, R. S., Stoller, R. E., Suzudo, T., Malerba, L., Banhart, F., Weber, W. J., Willaime, F., Dudarev, S. L. & Simeone, D., Dec 15 2018, In : Journal of Nuclear Materials. 512, p. 450-479 30 p.

Research output: Contribution to journalReview article

Progress in hydrogen production over transition metal carbide catalysts: challenges and opportunities

Zhang, X., Shi, C., Chen, B., Kuhn, A. N., Ma, D. & Yang, H., Jun 2018, In : Current Opinion in Chemical Engineering. 20, p. 68-77 10 p.

Research output: Contribution to journalReview article

Prospects for single-site interrogation using in situ multimodal electrochemical scanning probe techniques

Schorr, N. B., Gossage, Z. T. & Rodríguez-López, J., Mar 2018, In : Current Opinion in Electrochemistry. 8, p. 89-95 7 p.

Research output: Contribution to journalReview article

QMCPACK: An open source ab initio quantum Monte Carlo package for the electronic structure of atoms, molecules and solids

Kim, J., Baczewski, A. T., Beaudet, T. D., Benali, A., Bennett, M. C., Berrill, M. A., Blunt, N. S., Borda, E. J. L., Casula, M., Ceperley, D. M., Chiesa, S., Clark, B. K., Clay, R. C., Delaney, K. T., Dewing, M., Esler, K. P., Hao, H., Heinonen, O., Kent, P. R. C., Krogel, J. T. & 28 others, Kylanpa, I., Li, Y. W., Lopez, M. G., Luo, Y., Malone, F. D., Martin, R. M., Mathuriya, A., McMinis, J., Melton, C. A., Mitas, L., Morales, M. A., Neuscamman, E., Parker, W. D., Pineda Flores, S. D., Romero, N. A., Rubenstein, B. M., Shea, J. A. R., Shin, H., Shulenburger, L., Tillack, A. F., Townsend, J. P., Tubman, N. M., Van Der Goetz, B., Vincent, J. E., Yang, D. C., Yang, Y., Zhang, S. & Zhao, L., Apr 20 2018, In : Journal of Physics Condensed Matter. 30, 19, 195901.

Research output: Contribution to journalReview article

Quantitative phase imaging in biomedicine

Park, Y. K., Depeursinge, C. & Popescu, G., Oct 1 2018, In : Nature Photonics. 12, 10, p. 578-589 12 p.

Research output: Contribution to journalReview article

Recent advances in metabolic engineering of Saccharomyces cerevisiae: New tools and their applications

Lian, J., Mishra, S. & Zhao, H., Nov 2018, In : Metabolic Engineering. 50, p. 85-108 24 p.

Research output: Contribution to journalReview article

Recent developments in surface science and engineering, thin films, nanoscience, biomaterials, plasma science, and vacuum technology

Mozetič, M., Vesel, A., Primc, G., Eisenmenger-Sittner, C., Bauer, J., Eder, A., Schmid, G. H. S., Ruzic, D. N., Ahmed, Z., Barker, D., Douglass, K. O., Eckel, S., Fedchak, J. A., Hendricks, J., Klimov, N., Ricker, J., Scherschligt, J., Stone, J., Strouse, G., Capan, I. & 31 others, Buljan, M., Milošević, S., Teichert, C., Cohen, S. R., Silva, A. G., Lehocky, M., Humpoliček, P., Rodriguez, C., Hernandez-Montelongo, J., Mercier, D., Manso-Silván, M., Ceccone, G., Galtayries, A., Stana-Kleinschek, K., Petrov, I., Greene, J. E., Avila, J., Chen, C. Y., Caja-Munoz, B., Yi, H., Boury, A., Lorcy, S., Asensio, M. C., Bredin, J., Gans, T., O'Connell, D., Brendin, J., Reniers, F., Vincze, A., Anderle, M. & Montelius, L., Aug 30 2018, In : Thin Solid Films. 660, p. 120-160 41 p.

Research output: Contribution to journalReview article

Recent developments in the application of P450 based biocatalysts

Wei, Y., Ang, E. L. & Zhao, H., Apr 2018, In : Current Opinion in Chemical Biology. 43, p. 1-7 7 p.

Research output: Contribution to journalReview article

Reconstitution and substrate specificity for isopentenyl pyrophosphate of the antiviral radical SAM enzyme viperin

Chakravarti, A., Selvadurai, K., Shahoei, R., Lee, H., Fatma, S., Tajkhorshid, E. & Huang, R. H., Sep 7 2018, In : Journal of Biological Chemistry. 293, 36, p. 14122-14133 12 p.

Research output: Contribution to journalReview article

Reproducibility and replicability of rodent phenotyping in preclinical studies

Kafkafi, N., Agassi, J., Chesler, E. J., Crabbe, J. C., Crusio, W. E., Eilam, D., Gerlai, R., Golani, I., Gomez-Marin, A., Heller, R., Iraqi, F., Jaljuli, I., Karp, N. A., Morgan, H., Nicholson, G., Pfaff, D. W., Richter, S. H., Stark, P. B., Stiedl, O., Stodden, V. & 6 others, Tarantino, L. M., Tucci, V., Valdar, W., Williams, R. W., Würbel, H. & Benjamini, Y., Apr 2018, In : Neuroscience and Biobehavioral Reviews. 87, p. 218-232 15 p.

Research output: Contribution to journalReview article

Review of Particle Physics

Tanabashi, M., Hagiwara, K., Hikasa, K., Nakamura, K., Sumino, Y., Takahashi, F., Tanaka, J., Agashe, K., Aielli, G., Amsler, C., Antonelli, M., Asner, D. M., Baer, H., Banerjee, S., Barnett, R. M., Basaglia, T., Bauer, C. W., Beatty, J. J., Belousov, V. I., Beringer, J. & 211 others, Bethke, S., Bettini, A., Bichsel, H., Biebel, O., Black, K. M., Blucher, E., Buchmuller, O., Burkert, V., Bychkov, M. A., Cahn, R. N., Carena, M., Ceccucci, A., Cerri, A., Chakraborty, D., Chen, M. C., Chivukula, R. S., Cowan, G., Dahl, O., D'Ambrosio, G., Damour, T., De Florian, D., De Gouvêa, A., Degrand, T., De Jong, P., Dissertori, G., Dobrescu, B. A., D'Onofrio, M., Doser, M., Drees, M., Dreiner, H. K., Dwyer, D. A., Eerola, P., Eidelman, S., Ellis, J., Erler, J., Ezhela, V. V., Fetscher, W., Fields, B. D., Firestone, R., Foster, B., Freitas, A., Gallagher, H., Garren, L., Gerber, H. J., Gerbier, G., Gershon, T., Gershtein, Y., Gherghetta, T., Godizov, A. A., Goodman, M., Grab, C., Gritsan, A. V., Grojean, C., Groom, D. E., Grünewald, M., Gurtu, A., Gutsche, T., Haber, H. E., Hanhart, C., Hashimoto, S., Hayato, Y., Hayes, K. G., Hebecker, A., Heinemeyer, S., Heltsley, B., Hernández-Rey, J. J., Hisano, J., Höcker, A., Holder, J., Holtkamp, A., Hyodo, T., Irwin, K. D., Johnson, K. F., Kado, M., Karliner, M., Katz, U. F., Klein, S. R., Klempt, E., Kowalewski, R. V., Krauss, F., Kreps, M., Krusche, B., Kuyanov, Y. V., Kwon, Y., Lahav, O., Laiho, J., Lesgourgues, J., Liddle, A., Ligeti, Z., Lin, C. J., Lippmann, C., Liss, T. M., Littenberg, L., Lugovsky, K. S., Lugovsky, S. B., Lusiani, A., Makida, Y., Maltoni, F., Mannel, T., Manohar, A. V., Marciano, W. J., Martin, A. D., Masoni, A., Matthews, J., Meißner, U. G., Milstead, D., Mitchell, R. E., Mönig, K., Molaro, P., Moortgat, F., Moskovic, M., Murayama, H., Narain, M., Nason, P., Navas, S., Neubert, M., Nevski, P., Nir, Y., Olive, K. A., Pagan Griso, S., Parsons, J., Patrignani, C., Peacock, J. A., Pennington, M., Petcov, S. T., Petrov, V. A., Pianori, E., Piepke, A., Pomarol, A., Quadt, A., Rademacker, J., Raffelt, G., Ratcliff, B. N., Richardson, P., Ringwald, A., Roesler, S., Rolli, S., Romaniouk, A., Rosenberg, L. J., Rosner, J. L., Rybka, G., Ryutin, R. A., Sachrajda, C. T., Sakai, Y., Salam, G. P., Sarkar, S., Sauli, F., Schneider, O., Scholberg, K., Schwartz, A. J., Scott, D., Sharma, V., Sharpe, S. R., Shutt, T., Silari, M., Sjöstrand, T., Skands, P., Skwarnicki, T., Smith, J. G., Smoot, G. F., Spanier, S., Spieler, H., Spiering, C., Stahl, A., Stone, S. L., Sumiyoshi, T., Syphers, M. J., Terashi, K., Terning, J., Thoma, U., Thorne, R. S., Tiator, L., Titov, M., Tkachenko, N. P., Törnqvist, N. A., Tovey, D. R., Valencia, G., Van De Water, R., Varelas, N., Venanzoni, G., Verde, L., Vincter, M. G., Vogel, P., Vogt, A., Wakely, S. P., Walkowiak, W., Walter, C. W., Wands, D., Ward, D. R., Wascko, M. O., Weiglein, G., Weinberg, D. H., Weinberg, E. J., White, M., Wiencke, L. R., Willocq, S., Wohl, C. G., Womersley, J., Woody, C. L., Workman, R. L., Yao, W. M., Zeller, G. P., Zenin, O. V., Zhu, R. Y., Zhu, S. L., Zimmermann, F., Zyla, P. A., Anderson, J., Fuller, L., Lugovsky, V. S. & Schaffner, P., Aug 1 2018, In : Physical Review D. 98, 3, 030001.

Research output: Contribution to journalReview article

Secondary structures in synthetic polypeptides from N-carboxyanhydrides: design, modulation, association, and material applications

Song, Z., Fu, H., Wang, R., Pacheco, L. A., Wang, X., Lin, Y. & Cheng, J., Oct 7 2018, In : Chemical Society Reviews. 47, 19, p. 7401-7425 25 p.

Research output: Contribution to journalReview article