Research Output 1965 2020

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2018

Crowdsourcing Methods for Data Collection in Geophysics: State of the Art, Issues, and Future Directions

Zheng, F., Tao, R., Maier, H. R., See, L., Savic, D., Zhang, T., Chen, Q., Assumpção, T. H., Yang, P., Heidari, B., Rieckermann, J., Minsker, B., Bi, W., Cai, X., Solomatine, D. & Popescu, I., Dec 2018, In : Reviews of Geophysics. 56, 4, p. 698-740 43 p.

Research output: Contribution to journalReview article

geophysics
data acquisition
geography
hazard management
privacy

CryoEM-based hybrid modeling approaches for structure determination

Cassidy, C. K., Himes, B. A., Luthey-Schulten, Z. A. & Zhang, P., Jun 2018, In : Current Opinion in Microbiology. 43, p. 14-23 10 p.

Research output: Contribution to journalReview article

Cryoelectron Microscopy

Current technologies of electrochemical immunosensors: Perspective on signal amplification

Cho, I. H., Lee, J., Kim, J., Kang, M. S., Paik, J. K., Ku, S., Cho, H. M., Irudayaraj, J. & Kim, D. H., Jan 12 2018, In : Sensors (Switzerland). 18, 1, 207.

Research output: Contribution to journalReview article

Immunosensors
Nanostructures
Biosensing Techniques
Nanostructured materials
Biosensors

Designed transition metal catalysts for intracellular organic synthesis

Bai, Y., Chen, J. & Zimmerman, S. C., Mar 7 2018, In : Chemical Society Reviews. 47, 5, p. 1811-1821 11 p.

Research output: Contribution to journalReview article

Transition metals
Synthetic metals
Catalysts
Cytotoxins
Functional groups

Detection and digital resolution counting of nanoparticles with optical resonators and applications in biosensing

Aguirre, M. Á., Long, K. D., Li, N., Manoto, S. L. & Cunningham, B. T., Jun 1 2018, In : Chemosensors. 6, 2, 13.

Research output: Contribution to journalReview article

Optical resonators
optical resonators
counting
Nanoparticles
nanoparticles

Deterministic Design of Chemistry and Mesostructure in Li-Ion Battery Electrodes

Braun, P. V. & Cook, J. B., Apr 24 2018, In : ACS Nano. 12, 4, p. 3060-3064 5 p.

Research output: Contribution to journalReview article

electric batteries
chemistry
Electrodes
electrodes
ions

Diffuse-Interface Capturing Methods for Compressible Two-Phase Flows

Saurel, R. & Pantano, C., Jan 5 2018, In : Annual Review of Fluid Mechanics. 50, p. 105-130 26 p.

Research output: Contribution to journalReview article

two phase flow
fluids
compressible flow
equations of state
plastics

Earth BioGenome Project: Sequencing life for the future of life

Lewin, H. A., Robinson, G. E., Kress, W. J., Baker, W. J., Coddington, J., Crandall, K. A., Durbin, R., Edwards, S. V., Forest, F., Gilbert, M. T. P., Goldstein, M. M., Grigoriev, I. V., Hackett, K. J., Haussler, D., Jarvis, E. D., Johnson, W. E., Patrinos, A., Richards, S., Castilla-Rubio, J. C., Van Sluys, M. A. & 4 others, Soltis, P. S., Xu, X., Yang, H. & Zhang, G., Apr 24 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 17, p. 4325-4333 9 p.

Research output: Contribution to journalReview article

Biodiversity
Ecosystem
Planets
Endangered Species
Information Dissemination

Editorial: Building strategies for porcine cancer models

Collares, T., Seixas, F. K., Rund, L. A. & Schook, L. B., Oct 2 2018, In : Frontiers in Genetics. 9, OCT, 377.

Research output: Contribution to journalReview article

Swine
Neoplasms

Elastic Fluctuations and Structural Heterogeneities in Metallic Glasses

Liu, C. & Maass, C. R. E., Jul 25 2018, In : Advanced Functional Materials. 28, 30, 1800388.

Research output: Contribution to journalReview article

Metallic glass
metallic glasses
casts
Shear bands
Crystallization

Emergence of two near-infrared windows for in vivo and intraoperative SERS

Lane, L. A., Xue, R. & Nie, S., Aug 2018, In : Current Opinion in Chemical Biology. 45, p. 95-103 9 p.

Research output: Contribution to journalReview article

Raman Spectrum Analysis
Raman scattering
Tissue
Infrared radiation
Light

Engineering Polymersomes for Diagnostics and Therapy

Leong, J., Teo, J. Y., Aakalu, V. K., Yang, Y. Y. & Kong, H., Apr 25 2018, In : Advanced Healthcare Materials. 7, 8, 1701276.

Research output: Contribution to journalReview article

Imaging techniques
Molecules
Controllability
Pharmaceutical Preparations
Self assembly

Engineering the Surface of Therapeutic "living" Cells

Park, J., Andrade, B., Seo, Y., Kim, M. J., Zimmerman, S. C. & Kong, H. J., Feb 28 2018, In : Chemical reviews. 118, 4, p. 1664-1690 27 p.

Research output: Contribution to journalReview article

Cell engineering
Drug Carriers
Adhesion
Tissue
Nanoparticles

Escapement mechanisms and the conversion of disequilibria; the engines of creation

Branscomb, E., Biancalani, T., Goldenfeld, N. & Russell, M., Mar 17 2018, In : Physics Reports. 677, p. 1-60 60 p.

Research output: Contribution to journalReview article

engines
cascades
free energy
energy
causes

Evaluation of low-temperature cracking performance of asphalt pavements using Acoustic Emission: A review

Behnia, B., Buttlar, W. & Reis, H., Feb 21 2018, In : Applied Sciences (Switzerland). 8, 2, 306.

Research output: Contribution to journalReview article

asphalt
pavements
Asphalt pavements
acoustic emission
Acoustic emissions
Biocatalysis
Enzymes
Synthetic Biology
Metabolic engineering
Metabolic Engineering

Fatigue behavior of high-entropy alloys: A review

Chen, P. Y., Lee, C., Wang, S. Y., Seifi, M., Lewandowski, J. J., Dahmen, K. A., Jia, H. L., Xie, X., Chen, B. L., Yeh, J. W., Tsai, C. W., Yuan, T. & Liaw, P. K., Feb 1 2018, In : Science China Technological Sciences. 61, 2, p. 168-178 11 p.

Research output: Contribution to journalReview article

Entropy
Fatigue of materials
Fatigue crack propagation
Bending (deformation)
Solid solutions

From High-Level Specification to High-Performance Code

Franchetti, F., Moura, J. M. F., Padua, D. A. & Dongarra, J., Nov 2018, In : Proceedings of the IEEE. 106, 11, p. 1875-1878 4 p., 8510981.

Research output: Contribution to journalReview article

Computer systems
Specifications
Computer architecture
Particle accelerators

Gasification of biowaste: A critical review and outlooks

Watson, J., Zhang, Y., Si, B., Chen, W. T. & de Souza, R., Mar 2018, In : Renewable and Sustainable Energy Reviews. 83, p. 1-17 17 p.

Research output: Contribution to journalReview article

Gasification
Steam
Gas heating
Tar
Gases

Genetic accommodation and the role of ancestral plasticity in the evolution of insect eusociality

Jones, B. M. & Robinson, G. E., Dec 2018, In : Journal of Experimental Biology. 221, 23, jeb153163.

Research output: Contribution to journalReview article

eusociality
plasticity
Insects
insect
Phenotype

How does solvation in the cell affect protein folding and binding?

Davis, C. M., Gruebele, M. & Sukenik, S., Feb 2018, In : Current Opinion in Structural Biology. 48, p. 23-29 7 p.

Research output: Contribution to journalReview article

Protein Folding
Protein Binding
Proteins
Membrane Proteins

How many human proteoforms are there?

Aebersold, R., Agar, J. N., Amster, I. J., Baker, M. S., Bertozzi, C. R., Boja, E. S., Costello, C. E., Cravatt, B. F., Fenselau, C., Garcia, B. A., Ge, Y., Gunawardena, J., Hendrickson, R. C., Hergenrother, P. J., Huber, C. G., Ivanov, A. R., Jensen, O. N., Jewett, M. C., Kelleher, N. L., Kiessling, L. L. & 33 others, Krogan, N. J., Larsen, M. R., Loo, J. A., Ogorzalek Loo, R. R., Lundberg, E., Maccoss, M. J., Mallick, P., Mootha, V. K., Mrksich, M., Muir, T. W., Patrie, S. M., Pesavento, J. J., Pitteri, S. J., Rodriguez, H., Saghatelian, A., Sandoval, W., Schlüter, H., Sechi, S., Slavoff, S. A., Smith, L. M., Snyder, M. P., Thomas, P. M., Uhlén, M., Van Eyk, J. E., Vidal, M., Walt, D. R., White, F. M., Williams, E. R., Wohlschlager, T., Wysocki, V. H., Yates, N. A., Young, N. L. & Zhang, B., Feb 14 2018, In : Nature chemical biology. 14, 3, p. 206-214 9 p.

Research output: Contribution to journalReview article

Post Translational Protein Processing
Proteins
Proteome
Proteomics
Amino Acid Sequence

Inferring Nighttime Ionospheric Parameters with the Far Ultraviolet Imager Onboard the Ionospheric Connection Explorer

Kamalabadi, F., Qin, J., Harding, B. J., Iliou, D., Makela, J. J., Meier, R. R., England, S. L., Frey, H. U., Mende, S. B. & Immel, T. J., Jun 1 2018, In : Space Science Reviews. 214, 4, 70.

Research output: Contribution to journalReview article

ionospherics
ionosphere
ionospheres
oxygen
F region

Infrared Spectroscopic Imaging Advances as an Analytical Technology for Biomedical Sciences

Wrobel, T. P. & Bhargava, R., Feb 6 2018, In : Analytical chemistry. 90, 3, p. 1444-1463 20 p.

Research output: Contribution to journalReview article

Infrared Spectrophotometry
Biomedical Technology
Biomedical Research
Light

Innovations in CRISPR technology

Brooks, A. K. & Gaj, T., Aug 2018, In : Current Opinion in Biotechnology. 52, p. 95-101 7 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Innovation
Technology
Genes
Gene therapy

Intraoperative fluorescence imaging in thoracic surgery

Newton, A. D., Predina, J. D., Nie, S., Low, P. S. & Singhal, S., Aug 1 2018, In : Journal of Surgical Oncology. 118, 2, p. 344-355 12 p.

Research output: Contribution to journalReview article

Optical Imaging
Thoracic Surgery
Folic Acid
Clinical Trials, Phase I
Indocyanine Green
Energy Transfer
dynamical systems
Energy transfer
energy transfer
nonlinearity

Joint spectral characterization of photon-pair sources

Zielnicki, K., Garay-Palmett, K., Cruz-Delgado, D., Cruz-Ramirez, H., O’Boyle, M. F., Fang, B., Lorenz, V. O., U’Ren, A. B. & Kwiat, P. G., Jun 7 2018, In : Journal of Modern Optics. 65, 10, p. 1141-1160 20 p.

Research output: Contribution to journalReview article

photons
four-wave mixing
purity
monochromators
stimulated emission

Labeling for Quantitative Comparison of Imaging Measurements in Vitro and in Cells

Davis, C. M. & Gruebele, M., Apr 3 2018, In : Biochemistry. 57, 13, p. 1929-1938 10 p.

Research output: Contribution to journalReview article

Cytology
Labeling
RNA
Protein folding
Imaging techniques

Light-emitting diodes of colloidal quantum dots and nanorod heterostructures for future emissive displays

Jiang, Y., Cho, S. Y. & Shim, M., Jan 1 2018, In : Journal of Materials Chemistry C. 6, 11, p. 2618-2634 17 p.

Research output: Contribution to journalReview article

Nanorods
Semiconductor quantum dots
Light emitting diodes
Heterojunctions
Display devices

Machine learning and data science in soft materials engineering

Ferguson, A. L., Jan 31 2018, In : Journal of Physics Condensed Matter. 30, 4, 043002.

Research output: Contribution to journalReview article

machine learning
Learning systems
engineering
learning
engine design

Managing water on heat transfer surfaces: A critical review of techniques to modify surface wettability for applications with condensation or evaporation

Edalatpour, M., Liu, L., Jacobi, A. M., Eid, K. F. & Sommers, A. D., Jul 15 2018, In : Applied Energy. 222, p. 967-992 26 p.

Research output: Contribution to journalReview article

wettability
heat transfer
Wetting
condensation
Condensation

Materials for optical fiber lasers: A review

Dragic, P. D., Cavillon, M. & Ballato, J., Dec 1 2018, In : Applied Physics Reviews. 5, 4, 041301.

Research output: Contribution to journalReview article

fiber lasers
optical fibers
symbiosis
engineering
waveguides

Micro-plasticity and recent insights from intermittent and small-scale plasticity

Maass, C. R. E. & Derlet, P. M., Jan 15 2018, In : Acta Materialia. 143, p. 338-363 26 p.

Research output: Contribution to journalReview article

Plasticity
Plastics
Microstructure
Mechanical testing
Plastic deformation

Microscopic view of lipids and their diverse biological functions

Wen, P. C., Mahinthichaichan, P., Trebesch, N., Jiang, T., Zhao, Z., Shinn, E., Wang, Y., Shekhar, M., Kapoor, K., Chan, C. K. & Tajkhorshid, E., Aug 2018, In : Current Opinion in Structural Biology. 51, p. 177-186 10 p.

Research output: Contribution to journalReview article

Lipids
Membranes
Physiological Phenomena
Lipid Bilayers
Hydrodynamics

Multichannel spectrometers in animals

Cronin, T. W., Garcia, M. & Gruev, V., Mar 2018, In : Bioinspiration and Biomimetics. 13, 2, 021001.

Research output: Contribution to journalReview article

Imaging systems
Spectrometers
Animals
Biomimetics
Invertebrates

Nonlinear distribution of sediment at river diversions: Brief history of the bulle effect and its implications

Dutta, S. & Garcia, M. H., May 1 2018, In : Journal of Hydraulic Engineering. 144, 5, 06118001.

Research output: Contribution to journalReview article

River diversion
Sediments
History
bifurcation
history

Nonprecious Metal Catalysts for Oxygen Reduction in Heterogeneous Aqueous Systems

Gewirth, A. A., Varnell, J. A. & Diascro, A. M., Mar 14 2018, In : Chemical reviews. 118, 5, p. 2313-2339 27 p.

Research output: Contribution to journalReview article

Metals
Oxygen
Catalysts
Electrocatalysis
Transition metals

Of Mice, Dogs, Pigs, and Men: Choosing the Appropriate Model for Immuno-Oncology Research

Overgaard, N. H., Fan, T. M., Schachtschneider, K. M., Principe, D. R., Schook, L. B. & Jungersen, G., Dec 31 2018, In : ILAR Journal. 59, 3, p. 247-262 16 p.

Research output: Contribution to journalReview article

Oncology
Tumors
Swine
Dogs
swine
Energy Transfer
Energy transfer
energy transfer
Scattering
Energy

Plasmonic nano-arrays for ultrasensitive bio-sensing

Jiang, J., Wang, X., Li, S., Ding, F., Li, N., Meng, S., Li, R., Qi, J., Liu, Q. & Liu, G. L., Jan 1 2018, In : Nanophotonics. 7, 9, p. 1517-1531 15 p.

Research output: Contribution to journalReview article

Surface Plasmon Resonance
Surface plasmon resonance
surface plasmon resonance
Sensor arrays
Point-of-Care Systems

Point-of-care sensors for the management of sepsis

Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In : Nature biomedical engineering. 2, 9, p. 640-648 9 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Sepsis
Health
Sensors
Infection

Potential lymphangiogenesis therapies: Learning from current antiangiogenesis therapies—A review

Yamakawa, M., Doh, S. J., Santosa, S. M., Montana, M., Qin, E. C., Kong, H., Han, K. Y., Yu, C., Rosenblatt, M. I., Kazlauskas, A., Chang, J. H. & Azar, D. T., Nov 2018, In : Medicinal Research Reviews. 38, 6, p. 1769-1798 30 p.

Research output: Contribution to journalReview article

Lymphangiogenesis
Learning
Pharmaceutical Preparations
Vascular Endothelial Growth Factor C
Nanotechnology

Primary radiation damage: A review of current understanding and models

Nordlund, K., Zinkle, S. J., Sand, A. E., Granberg, F., Averback, R. S., Stoller, R. E., Suzudo, T., Malerba, L., Banhart, F., Weber, W. J., Willaime, F., Dudarev, S. L. & Simeone, D., Dec 15 2018, In : Journal of Nuclear Materials. 512, p. 450-479 30 p.

Research output: Contribution to journalReview article

Radiation damage
radiation damage
Atoms
damage
atoms

Progress in hydrogen production over transition metal carbide catalysts: challenges and opportunities

Zhang, X., Shi, C., Chen, B., Kuhn, A. N., Ma, D. & Yang, H., Jun 2018, In : Current Opinion in Chemical Engineering. 20, p. 68-77 10 p.

Research output: Contribution to journalReview article

Hydrogen production
Transition metals
Carbides
Catalysts
Metals

Prospects for single-site interrogation using in situ multimodal electrochemical scanning probe techniques

Schorr, N. B., Gossage, Z. T. & Rodriguez Lopez, J., Mar 2018, In : Current Opinion in Electrochemistry. 8, p. 89-95 7 p.

Research output: Contribution to journalReview article

Scanning
Scanning probe microscopy
Vibrational spectroscopy
Chemical analysis
Mass spectrometry

QMCPACK: An open source ab initio quantum Monte Carlo package for the electronic structure of atoms, molecules and solids

Kim, J., Baczewski, A. T., Beaudet, T. D., Benali, A., Bennett, M. C., Berrill, M. A., Blunt, N. S., Borda, E. J. L., Casula, M., Ceperley, D. M., Chiesa, S., Clark, B. K., Clay, R. C., Delaney, K. T., Dewing, M., Esler, K. P., Hao, H., Heinonen, O., Kent, P. R. C., Krogel, J. T. & 28 others, Kylanpa, I., Li, Y. W., Lopez, M. G., Luo, Y., Malone, F. D., Martin, R. M., Mathuriya, A., McMinis, J., Melton, C. A., Mitas, L., Morales, M. A., Neuscamman, E., Parker, W. D., Pineda Flores, S. D., Romero, N. A., Rubenstein, B. M., Shea, J. A. R., Shin, H., Shulenburger, L., Tillack, A. F., Townsend, J. P., Tubman, N. M., Van Der Goetz, B., Vincent, J. E., Yang, D. C., Yang, Y., Zhang, S. & Zhao, L., Apr 20 2018, In : Journal of Physics Condensed Matter. 30, 19, 195901.

Research output: Contribution to journalReview article

Electronic structure
electronic structure
Atoms
Molecules
atoms

Quantitative phase imaging in biomedicine

Park, Y. K., Depeursinge, C. & Popescu, G., Oct 1 2018, In : Nature Photonics. 12, 10, p. 578-589 12 p.

Research output: Contribution to journalReview article

Imaging techniques
commercialization
optical paths
microscopy
Photobleaching

Recent advances in metabolic engineering of Saccharomyces cerevisiae: New tools and their applications

Lian, J., Mishra, S. & Zhao, H., Nov 2018, In : Metabolic Engineering. 50, p. 85-108 24 p.

Research output: Contribution to journalReview article

Metabolic engineering
Metabolic Engineering
Yeast
Saccharomyces cerevisiae
Clustered Regularly Interspaced Short Palindromic Repeats

Recent developments in surface science and engineering, thin films, nanoscience, biomaterials, plasma science, and vacuum technology

Mozetič, M., Vesel, A., Primc, G., Eisenmenger-Sittner, C., Bauer, J., Eder, A., Schmid, G. H. S., Ruzic, D. N., Ahmed, Z., Barker, D., Douglass, K. O., Eckel, S., Fedchak, J. A., Hendricks, J., Klimov, N., Ricker, J., Scherschligt, J., Stone, J., Strouse, G., Capan, I. & 31 others, Buljan, M., Milošević, S., Teichert, C., Cohen, S. R., Silva, A. G., Lehocky, M., Humpoliček, P., Rodriguez, C., Hernandez-Montelongo, J., Mercier, D., Manso-Silván, M., Ceccone, G., Galtayries, A., Stana-Kleinschek, K., Petrov, I., Greene, J. E., Avila, J., Chen, C. Y., Caja-Munoz, B., Yi, H., Boury, A., Lorcy, S., Asensio, M. C., Bredin, J., Gans, T., O'Connell, D., Brendin, J., Reniers, F., Vincze, A., Anderle, M. & Montelius, L., Aug 30 2018, In : Thin Solid Films. 660, p. 120-160 41 p.

Research output: Contribution to journalReview article

Vacuum technology
Nanoscience
Biocompatible Materials
Biomaterials
engineering