Research Output 1965 2020

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Review article
2008

Semiconductor wires and ribbons for high-performance flexible electronics

Baca, A. J., Ahn, J. H., Sun, Y., Meitl, M. A., Menard, E., Kim, H. S., Choi, W. M., Kim, D. H., Huang, Y. & Rogers, J. A., Jul 14 2008, In : Angewandte Chemie - International Edition. 47, 30, p. 5524-5542 19 p.

Research output: Contribution to journalReview article

Flexible electronics
Wire
Semiconductor materials
Fabrication
Networks (circuits)

Sequencing breakthroughs for genomic ecology and evolutionary biology

Hudson, M., Jan 1 2008, In : Molecular ecology resources. 8, 1, p. 3-17 15 p.

Research output: Contribution to journalReview article

evolutionary biology
Ecology
genomics
genome
Genome

Some considerations on nanowires in nanoelectronics

Ferry, D. K., Gilbert, M. & Akis, R., Nov 27 2008, In : IEEE Transactions on Electron Devices. 55, 11, p. 2820-2826 7 p.

Research output: Contribution to journalReview article

Nanoelectronics
Ballistics
Nanowires
Integrated circuits

Statistical language models for information retrieval a critical review

Zhai, C. X., Dec 1 2008, In : Foundations and Trends in Information Retrieval. 2, 3, p. 137-213 77 p.

Research output: Contribution to journalReview article

Information retrieval
Tuning

Strain induced semiconductor nanotubes: From formation process to device applications

Li, X., Oct 7 2008, In : Journal of Physics D: Applied Physics. 41, 19, 193001.

Research output: Contribution to journalReview article

Nanotubes
nanotubes
Semiconductor materials
Nanophotonics
Nanoelectronics

Targeted magnetic iron oxide nanoparticles for tumor imaging and therapy

Peng, X. H., Qian, X., Mao, H., Wang, A. Y., Chen, Z. G., Nie, S. & Shin, D. M., Nov 4 2008, In : International journal of nanomedicine. 3, 3, p. 311-321 11 p.

Research output: Contribution to journalReview article

Iron oxides
Nanoparticles
Tumors
Imaging techniques
Neoplasms

Targeting RNA with small molecules

Thomas, J. R. & Hergenrother, P. J., Apr 1 2008, In : Chemical reviews. 108, 4, p. 1171-1224 54 p.

Research output: Contribution to journalReview article

RNA
Molecules
Ligands
Macromolecules
Cell culture

Therapeutic nanoparticles for drug delivery in cancer

Cho, K., Wang, X., Nie, S., Chen, Z. & Shin, D. M., Mar 1 2008, In : Clinical Cancer Research. 14, 5, p. 1310-1316 7 p.

Research output: Contribution to journalReview article

Nanoparticles
Pharmaceutical Preparations
Neoplasms
Therapeutics
Tumor Microenvironment

The sixth data release of the sloan digital sky survey

Adelman-McCarthy, J. K., Agüeros, M. A., Allam, S. S., Prieto, C. A., Anderson, K. S. J., Anderson, S. F., Annis, J., Bahcall, N. A., Bailer-Jones, C. A. L., Baldry, I. K., Barentine, J. C., Bassett, B. A., Becker, A. C., Beers, T. C., Bell, E. F., Berlind, A. A., Bernardi, M., Blanton, M. R., Bochanski, J. J., Boroski, W. N. & 143 others, Brinchmann, J., Brinkmann, J., Brunner, R. J., Budavári, T., Carliles, S., Carr, M. A., Castander, F. J., Cinabro, D., Cool, R. J., Covey, K. R., Csabai, I., Cunha, C. E., Davenport, J. R. A., Dilday, B., Doi, M., Eisenstein, D. J., Evans, M. L., Fan, X., Finkbeiner, D. P., Friedman, S. D., Frieman, J. A., Fukugita, M., Gänsicke, B. T., Gates, E., Gillespie, B., Glazebrook, K., Gray, J., Grebel, E. K., Gunn, J. E., Gurbani, V. K., Hall, P. B., Harding, P., Harvanek, M., Hawley, S. L., Hayes, J., Heckman, T. M., Hendry, J. S., Hindsley, R. B., Hirata, C. M., Hogan, C. J., Hogg, D. W., Hyde, J. B., Ichikawa, S. I., Ivezić, Ž., Jester, S., Johnson, J. A., Jorgensen, A. M., Jurić, M., Kent, S. M., Kessler, R., Kleinman, S. J., Knapp, G. R., Krön, R. G., Krzesinski, J., Kuropatkin, N., Lamb, D. Q., Lampeitl, H., Lebedeva, S., Lee, Y. S., Leger, R. F., Lépine, S., Lima, M., Lin, H., Long, D. C., Loomis, C. P., Loveday, J., Lupton, R. H., Malanushenko, O., Malanushenko, V., Mandelbaum, R., Margon, B., Marriner, J. P., Martínez-Delgado, D., Matsubara, T., McGehee, P. M., McKay, T. A., Meiksin, A., Morrison, H. L., Munn, J. A., Nakajima, R., Neilsen, E. H., Newberg, H. J., Nichol, R. C., Nicinski, T., Nieto-Santisteban, M., Nitta, A., Okamura, S., Owen, R., Oyaizu, H., Padmanabhan, N., Pan, K., Park, C., Peoples, J., Pier, J. R., Pope, A. C., Purger, N., Raddick, M. J., Fiorentin, P. R., Richards, G. T., Richmond, M. W., Riess, A. G., Rix, H. W., Rockosi, C. M., Sako, M., Schlegel, D. J., Schneider, D. P., Schreiber, M. R., Schwope, A. D., Seljak, U., Sesar, B., Sheldon, E., Shimasaku, K., Sivarani, T., Smith, J. A., Snedden, S. A., Steinmetz, M., Strauss, M. A., Subbarao, M., Suto, Y., Szalay, A. S., Szapudi, I., Szkody, P., Tegmark, M., Thakar, A. R., Tremonti, C. A., Tucker, D. L., Uomoto, A., Vanden Berk, D. E., Vandenberg, J., Vidrih, S., Vogeley, M. S., Voges, W., Vogt, N. P., Wadadekar, Y., Weinberg, D. H., West, A. A., White, S. D. M., Wilhite, B. C., Yanny, B., Yocum, D. R., York, D. G., Zehavi, I. & Zucker, D. B., Apr 2008, In : Astrophysical Journal, Supplement Series. 175, 2, p. 297-313 17 p.

Research output: Contribution to journalReview article

sky
galaxies
subtraction
stellar temperature
stars

The utility of behavioral models and modules in molecular analyses of social behavior

Barron, A. B. & Robinson, G. E., Apr 1 2008, In : Genes, Brain and Behavior. 7, 3, p. 257-265 9 p.

Research output: Contribution to journalReview article

Social Behavior
Space Simulation
Molecular Probes
Reward
Motivation

Using VMD: An introductory tutorial

Hsin, J., Arkhipov, A., Yin, Y., Stone, J. E. & Schulten, K., Dec 1 2008, In : Current Protocols in Bioinformatics. SUPPL. 24, p. 5.7.1-5.7.48

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Molecular dynamics
Drawing (graphics)
Lipid bilayers
Lipid Bilayers

What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?

Zhu, X. G., Long, S. P. & Ort, D. R., Apr 1 2008, In : Current Opinion in Biotechnology. 19, 2, p. 153-159 7 p.

Research output: Contribution to journalReview article

Solar Energy
Photosynthesis
Biomass
Solar energy
Economic Development
2007

A do-it-yourself quantum eraser

Hillmer, R. & Kwiat, P., May 2007, In : Scientific American. 296, 5, p. 90-95 6 p.

Research output: Contribution to journalReview article

Agricultural applications for transgenic livestock

Wheeler, M. B., May 1 2007, In : Trends in Biotechnology. 25, 5, p. 204-210 7 p.

Research output: Contribution to journalReview article

Genetically Modified Animals
Livestock
Agriculture
Technology
Developmental Biology

Alkyne metathesis: Catalysts and synthetic applications

Zhang, W. & Moore, J. S., Jan 1 2007, In : Advanced Synthesis and Catalysis. 349, 1-2, p. 93-120 28 p.

Research output: Contribution to journalReview article

Alkynes
Catalysts
Olefins
Alkenes
Biological Products

A survey of single-molecule techniques in chemical biology

Cornish, P. V. & Ha, T., Jan 1 2007, In : ACS chemical biology. 2, 1, p. 53-61 9 p.

Research output: Contribution to journalReview article

Biological Phenomena
Optical Tweezers
Optical tweezers
Protein folding
Molecules

Chapter 7 Variational Methods in Derivatives Pricing

Feng, L., Kovalov, P., Linetsky, V. & Marcozzi, M., Dec 1 2007, In : Handbooks in Operations Research and Management Science. 15, C, p. 301-342 42 p.

Research output: Contribution to journalReview article

Integrodifferential equations
Derivatives
Costs
Computational methods
Markov processes

Directed evolution of novel protein functions

Zhao, H., Oct 1 2007, In : Biotechnology and bioengineering. 98, 2, p. 313-317 5 p.

Research output: Contribution to journalReview article

Proteins
Protein Engineering
Molecular Models
Molecular Evolution
Mutation

DNA as a target for anticancer compounds: methods to determine the mode of binding and the mechanism of action

Palchaudhuri, R. & Hergenrother, P., Dec 1 2007, In : Current Opinion in Biotechnology. 18, 6, p. 497-503 7 p.

Research output: Contribution to journalReview article

DNA
Assays
Molecules
Intercalation
Pharmaceutical Preparations

Dynamical fluctuation effects in glassy colloidal suspensions

Schweizer, K. S., Dec 1 2007, In : Current Opinion in Colloid and Interface Science. 12, 6, p. 297-306 10 p.

Research output: Contribution to journalReview article

colloids
Suspensions
Confocal microscopy
Glass transition
computerized simulation

Elasticity imaging of polymeric media

Sridhar, M., Liu, J. & Insana, M. F., Apr 1 2007, In : Journal of Biomechanical Engineering. 129, 2, p. 259-272 14 p.

Research output: Contribution to journalReview article

Elasticity
Gelatin
Imaging techniques
Tissue
Polymers

Electron nematic phase in a transition metal oxide

Fradkin, E. H., Kivelson, S. A. & Oganesyan, V., Jan 12 2007, In : Science. 315, 5809, p. 196-197 2 p.

Research output: Contribution to journalReview article

Oxides
Metals
Electrons
Liquid Crystals

Evo-devo and the evolution of social behavior

Toth, A. L. & Robinson, G. E., Jul 1 2007, In : Trends in Genetics. 23, 7, p. 334-341 8 p.

Research output: Contribution to journalReview article

Social Behavior
Developmental Biology
Feeding Behavior
Genomics
Reproduction

Evolutionary and biomedical insights from the rhesus macaque genome

Gibbs, R. A., Rogers, J., Katze, M. G., Bumgarner, R., Weinstock, G. M., Mardis, E. R., Remington, K. A., Strausberg, R. L., Venter, J. C., Wilson, R. K., Batzer, M. A., Bustamante, C. D., Eichler, E. E., Hahn, M. W., Hardison, R. C., Makova, K. D., Miller, W., Milosavljevic, A., Palermo, R. E., Siepel, A. & 156 others, Sikela, J. M., Attaway, T., Bell, S., Bernard, K. E., Buhay, C. J., Chandrabose, M. N., Dao, M., Davis, C., Delehaunty, K. D., Ding, Y., Dinh, H. H., Dugan-Rocha, S., Fulton, L. A., Gabisi, R. A., Garner, T. T., Godfrey, J., Hawes, A. C., Hernandez, J., Hines, S., Holder, M., Hume, J., Jhangiani, S. N., Joshi, V., Khan, Z. M., Kirkness, E. F., Cree, A., Fowler, R. G., Lee, S., Lewis, L. R., Li, Z., Liu, Y. S., Moore, S. M., Muzny, D., Nazareth, L. V., Dinh, N. N., Okwuonu, G. O., Pai, G., Parker, D., Paul, H. A., Pfannkoch, C., Pohl, C. S., Rogers, Y. H., Ruiz, S. J., Sabo, A., Santibanez, J., Schneider, B. W., Smith, S. M., Sodergren, E., Svatek, A. F., Utterback, T. R., Vattathil, S., Warren, W., White, C. S., Chinwalla, A. T., Feng, Y., Halpern, A. L., Hillier, L. D. W., Huang, X., Minx, P., Nelson, J. O., Pepin, K. H., Qin, X., Sutton, G. G., Venter, E., Walenz, B. P., Wallis, J. W., Worley, K. C., Yang, S. P., Jones, S. M., Marra, M. A., Rocchi, M., Schein, J. E., Baertsch, R., Clarke, L., Csürös, M., Glasscock, J., Harris, R. A., Havlak, P., Jackson, A. R., Jiang, H., Liu, Y., Messina, D. N., Shen, Y., Song, H. X. Z., Wylie, T., Zhang, L., Birney, E., Han, K., Konkel, M. K., Lee, J., Smit, A. F. A., Ullmer, B., Wang, H., Xing, J., Burhans, R., Cheng, Z., Karro, J. E., Ma, J., Raney, B., She, X., Cox, M. J., Demuth, J. P., Dumas, L. J., Han, S. G., Hopkins, J., Karimpour-Fard, A., Kim, Y. H., Pollack, J. R., Vinar, T., Addo-Quaye, C., Degenhardt, J., Denby, A., Hubisz, M. J., Indap, A., Kosiol, C., Lahn, B. T., Lawson, H. A., Marklein, A., Nielsen, R., Vallender, E. J., Clark, A. G., Ferguson, B., Hernandez, R. D., Hirani, K., Kehrer-Sawatzki, H., Kolb, J., Patil, S., Pu, L. L., Ren, Y., Smith, D. G., Wheeler, D. A., Schenck, I., Ball, E. V., Chen, R., Cooper, D. N., Giardine, B., Hsu, F., Kent, W. J., Lesk, A., Nelson, D. L., O'Brien, W. E., Prüfer, K., Stenson, P. D., Wallace, J. C., Ke, H., Liu, X. M., Wang, P., Xiang, A. P., Yang, F., Barber, G. P., Haussler, D., Karolchik, D., Kern, A. D., Kuhn, R. M., Smith, K. E. & Zwieg, A. S., Apr 13 2007, In : Science. 316, 5822, p. 222-234 13 p.

Research output: Contribution to journalReview article

Macaca mulatta
Genome
Primates
Biomedical Research
Pan troglodytes

Experimental studies on burial of finite-length cylinders under oscillatory flow

Demir, S. T. & Garcia, M. H., Mar 1 2007, In : Journal of Waterway, Port, Coastal and Ocean Engineering. 133, 2, p. 117-124 8 p.

Research output: Contribution to journalReview article

oscillating flow
Scour
experimental study
Video cameras
Tunnels

Genetic resources, genome mapping and evolutionary genomics of the pig (Sus scrofa)

Chen, K., Baxter, T., Muir, W. M., Groenen, M. A. & Schook, L. B., Feb 10 2007, In : International Journal of Biological Sciences. 3, 3, p. 153-165 13 p.

Research output: Contribution to journalReview article

Sus scrofa
genetic resource
Chromosome Mapping
Genomics
genetic resources

Industry trends and research in dependable computing

Siewiorek, D. P., Yang, X. Z., Chillarege, R. & Kalbarczyk, Z. T., Oct 1 2007, In : Jisuanji Xuebao/Chinese Journal of Computers. 30, 10, p. 1645-1661 17 p.

Research output: Contribution to journalReview article

Industry

Inorganic semiconductors for flexible electronics

Sun, Y. & Rogers, J. A., Aug 3 2007, In : Advanced Materials. 19, 15, p. 1897-1916 20 p.

Research output: Contribution to journalReview article

Flexible electronics
Semiconductor materials
Thin films
Flat panel displays
Silicon

Intercontinental transport of aerosols and photochemical oxidants from Asia and its consequences

Wuebbles, D. J., Lei, H. & Lin, J., Nov 1 2007, In : Environmental Pollution. 150, 1, p. 65-84 20 p.

Research output: Contribution to journalReview article

Photochemical Oxidants
Aerosols
Oxidants
Air quality
Air

Managing chaos

Hubler, A. W., Foster, G. C. & Phelps, K. C., Jan 1 2007, In : Complexity. 12, 3, p. 10-13 4 p.

Research output: Contribution to journalReview article

Genomics
quantitative trait loci
genomics
animal
Pets

Mass spectrometric imaging of the nervous system

Rubakhin, S., Hatcher, N. G., Monroe, E. B., Heien, M. L. & Sweedler, J. V., Nov 1 2007, In : Current Pharmaceutical Design. 13, 32, p. 3325-3334 10 p.

Research output: Contribution to journalReview article

Brain Chemistry
Brain Diseases
Nervous System
Biomedical Research
Mass Spectrometry

Mechanical fatigue of Sn-rich Pb-free solder alloys

Shang, J. K., Zeng, Q. L., Zhang, L. & Zhu, Q. S., Mar 1 2007, In : Journal of Materials Science: Materials in Electronics. 18, 1-3, p. 211-227 17 p.

Research output: Contribution to journalReview article

solders
fatigue life
stress ratio
Fatigue of materials
cracks

Mechanism of hook formation in ultralow-carbon steel based on microscopy analysis and thermal-stress modeling

Sengupta, J., Thomas, B. G., Shin, H. J. & Kim, S. H., Jul 1 2007, In : Iron and Steel Technology. 4, 7, p. 83-95 13 p.

Research output: Contribution to journalReview article

Hooks
Thermal stress
Carbon steel
Microscopic examination
Microstructure

Micro- and nanopatterning techniques for organic electronic and optoelectronic systems

Menard, E., Meitl, M. A., Sun, Y., Park, J. U., Shir, D. J. L., Nam, Y. S., Jeon, S. & Rogers, J. A., Apr 1 2007, In : Chemical reviews. 107, 4, p. 1117-1160 44 p.

Research output: Contribution to journalReview article

Optoelectronic devices
Stamping
Organic compounds
Molding
Lithography

Microenvironmental regulation of biomacromolecular therapies

Kong, H. J. & Mooney, D. J., Jun 1 2007, In : Nature Reviews Drug Discovery. 6, 6, p. 455-463 9 p.

Research output: Contribution to journalReview article

Extracellular Matrix
Therapeutics
Drug Carriers
Drug Delivery Systems
Cell Adhesion

Microplate-based label-free screening on the BIND system

Cunningham, B. T. & Laing, L., Sep 1 2007, In : Bio Tech International. 19, 4, p. 14-18 5 p.

Research output: Contribution to journalReview article

Biosensing Techniques
Small Molecule Libraries
Technology
Proteins

Monitoring subsurface contamination using tree branches

Gopalakrishnan, G., Negri, M. C., Minsker, B. S. & Werth, C. J., Dec 1 2007, In : Ground Water Monitoring and Remediation. 27, 1, p. 65-74 10 p.

Research output: Contribution to journalReview article

Contamination
Soils
trichloroethylene
Monitoring
Trichloroethylene

Moving beyond heterogeneity and process complexity: A new vision for watershed hydrology

McDonnell, J. J., Sivapalan, M., Vaché, K., Dunn, S., Grant, G., Haggerty, R., Hinz, C., Hooper, R., Kirchner, J., Roderick, M. L., Selker, J. & Weiler, M., Jul 1 2007, In : Water Resources Research. 43, 7, W07301.

Research output: Contribution to journalReview article

hydrology
watershed
runoff
rainfall
science

Nanotechnology applications in cancer

Nie, S., Xing, Y., Kim, G. J. & Simons, J. W., Dec 18 2007, In : Annual Review of Biomedical Engineering. 9, p. 257-288 32 p.

Research output: Contribution to journalReview article

Nanotechnology
Nanoparticles
Molecular Imaging
Tumors
Neoplasms

Negative refraction in semiconductor metamaterials

Hoffman, A. J., Alekseyev, L., Howard, S. S., Franz, K. J., Wasserman, D. M., Podolskiy, V. A., Narimanov, E. E., Sivco, D. L. & Gmachl, C., Dec 2007, In : Nature Materials. 6, 12, p. 946-950 5 p.

Research output: Contribution to journalReview article

electromagnetic properties
Metamaterials
Refraction
refraction
Semiconductor materials

New fluorescent tools for watching nanometer-scale conformational changes of single molecules

Toprak, E. & Selvin, P. R., Jul 4 2007, In : Annual Review of Biophysics and Biomolecular Structure. 36, p. 349-369 21 p.

Research output: Contribution to journalReview article

Biophysics
Optical Imaging
Fluorescence Microscopy
Molecules
Fluorescence microscopy

Pleiotrophin, a multifunctional tumor promoter through induction of tumor angiogenesis, remodeling of the tumor microenvironment and activation of stromal fibroblasts

Perez-Pinera, P., Chang, Y. & Deuel, T. F., Dec 1 2007, In : Cell Cycle. 6, 23, p. 2877-2883 7 p.

Research output: Contribution to journalReview article

Tumor Microenvironment
Fibroblasts
Protein Tyrosine Phosphatases
Carcinogens
Tumors

Poly(ADP-ribose) makes a date with death

Heeres, J. T. & Hergenrother, P. J., Dec 1 2007, In : Current Opinion in Chemical Biology. 11, 6, p. 644-653 10 p.

Research output: Contribution to journalReview article

Apoptosis Inducing Factor
Poly Adenosine Diphosphate Ribose
Mitochondria
Poly(ADP-ribose) Polymerases
Cell death

Pressure-based finite-volume methods in computational fluid dynamics

Acharya, S., Baliga, B. R., Karki, K., Murthy, J. Y., Prakash, C. & Vanka, S. P., Apr 1 2007, In : Journal of Heat Transfer. 129, 4, p. 407-424 18 p.

Research output: Contribution to journalReview article

finite volume method
Finite volume method
computational fluid dynamics
mesh
Computational fluid dynamics

Response to "comment on 'Investigation of the optical and electronic properties of Ge2Sb2Te5 phase change material in its amorphous, cubic, and hexagonal phases'" [J. Appl. Phys. 97, 093509 (2005)]

Lee, B. S., Abelson, J. R., Bishop, S. G., Kang, D. H., Cheong, B. K. & Kim, K. B., Mar 13 2007, In : Journal of Applied Physics. 101, 2, 026112.

Research output: Contribution to journalReview article

phase change materials
illumination
optical properties
thin films
electronics

Review of the october 9, 1963 failure of the vaiont reservoir slope

Sadrekarimi, A. & Olson, S. M., Sep 6 2007, In : Geotechnical Special Publication. 157

Research output: Contribution to journalReview article

dams (hydrology)
dam construction
time domain reflectometry
site investigation
monitoring system

Simultaneous simulation of pathogen inactivation and bromate formation in full-scale ozone contactors by computer software

Kim, D. I., Hasan, S., Tang, G., Mariñas, B. J., Couillard, L., Shukairy, H. & Kim, J. H., Aug 1 2007, In : Journal / American Water Works Association. 99, 8, p. 77-91+12

Research output: Contribution to journalReview article

Bromates
Ozone
Pathogens
pathogen
ozone

Single-molecule experiments in vitro and in silico

Sotomayor, M. & Schulten, K., May 25 2007, In : Science. 316, 5828, p. 1144-1148 5 p.

Research output: Contribution to journalReview article

Elasticity
Computer Simulation
Molecular Dynamics Simulation
Ankyrin Repeat
Connectin

Single-molecule fluorescence to study molecularmotors

Park, H., Toprak, E. & Selvin, P. R., Feb 1 2007, In : Quarterly Reviews of Biophysics. 40, 1, p. 87-111 25 p.

Research output: Contribution to journalReview article

Optical Imaging
Fluorescence
Mitosis
Hydrolysis
Adenosine Triphosphate