Research Output 1965 2020

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Review article
2009

Advances in imaging secondary ion mass spectrometry for biological samples

Boxer, S. G., Kraft, M. L. & Weber, P. K., Nov 27 2009, In : Annual Review of Biophysics. 38, 1, p. 53-74 22 p.

Research output: Contribution to journalReview article

Secondary Ion Mass Spectrometry
Secondary ion mass spectrometry
Mass spectrometry
Mass Spectrometry
Imaging techniques

Agronomic experiences with Miscanthus x giganteus in Illinois, USA.

Pyter, R., Heaton, E., Dohleman, F., Voigt, T. & Long, S., 2009, In : Methods in molecular biology (Clifton, N.J.). 581, p. 41-52 12 p.

Research output: Contribution to journalReview article

Biomass
Poaceae
Rhizome
Research
Japan

A method for performing fully quantum mechanical simulations of gated silicon quantum wire structures

Akis, R., Ferry, D. K. & Gilbert, M. J., Jul 17 2009, In : Journal of Computational Electronics. 8, 2, p. 78-89 12 p.

Research output: Contribution to journalReview article

Quantum Wires
Semiconductor quantum wires
Silicon
quantum wires
Transistors
chronic diseases
human diseases
cancer
Chronic Disease
Animal Models

A review on polymer heat exchangers for HVAC&R applications

T'Joen, C., Park, Y., Wang, Q., Sommers, A., Han, X. & Jacobi, A. M., Aug 1 2009, In : International Journal of Refrigeration. 32, 5, p. 763-779 17 p.

Research output: Contribution to journalReview article

Heat exchangers
Polymer matrix composites
Materials properties
Polymers
Waste heat utilization

Atmospheric composition change: Climate-Chemistry interactions

Isaksen, I. S. A., Granier, C., Myhre, G., Berntsen, T. K., Dalsøren, S. B., Gauss, M., Klimont, Z., Benestad, R., Bousquet, P., Collins, W., Cox, T., Eyring, V., Fowler, D., Fuzzi, S., Jöckel, P., Laj, P., Lohmann, U., Maione, M., Monks, P., Prevot, A. S. H. & 11 others, Raes, F., Richter, A., Rognerud, B., Schulz, M., Shindell, D., Stevenson, D. S., Storelvmo, T., Wang, W. C., van Weele, M., Wild, M. & Wuebbles, D., Oct 1 2009, In : Atmospheric Environment. 43, 33, p. 5138-5192 55 p.

Research output: Contribution to journalReview article

climate change
climate
oxidation
climate effect
atmosphere-biosphere interaction

Biological Timekeeping

Gillette, M. L. & Abbott, S. M., Jun 1 2009, In : Sleep Medicine Clinics. 4, 2, p. 99-110 12 p.

Research output: Contribution to journalReview article

Biological Clocks
Circadian Clocks
Neurobiology
Periodicity
Sleep

Characterizing intercellular signaling peptides in drug addiction

Romanova, E. V., Hatcher, N. G., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2009, In : Neuropharmacology. 56, SUPPL. 1, p. 196-204 9 p.

Research output: Contribution to journalReview article

Substance-Related Disorders
Peptides
National Institute on Drug Abuse (U.S.)
Technology
Immunochemistry

Clustering of low-redshift (z ≤ 2.2) quasars from the sloan digital sky survey

Ross, N. P., Shen, Y., Strauss, M. A., Vanden Berk, D. E., Connolly, A. J., Richards, G. T., Schneider, D. P., Weinberg, D. H., Hall, P. B., Bahcall, N. A. & Brunner, R. J., Jan 1 2009, In : Astrophysical Journal. 697, 2, p. 1634-1655 22 p.

Research output: Contribution to journalReview article

quasars
halos
cosmology
dark matter
dimensional measurement

Convergence of biomarkers, bioinformatics and nanotechnology for individualized cancer treatment

Phan, J. H., Moffitt, R. A., Stokes, T. H., Liu, J., Young, A. N., Nie, S. & Wang, M. D., Jun 1 2009, In : Trends in Biotechnology. 27, 6, p. 350-358 9 p.

Research output: Contribution to journalReview article

Nanotechnology
Oncology
Biomarkers
Bioinformatics
Tumor Biomarkers

Design of functional metalloproteins

Lu, Y., Yeung, N., Sieracki, N. & Marshall, N. M., Aug 13 2009, In : Nature. 460, 7257, p. 855-862 8 p.

Research output: Contribution to journalReview article

Metalloproteins
Photosynthesis
Computational Biology
Water
Pharmaceutical Preparations

Development of multifunctional nanoparticles for targeted drug delivery and noninvasive imaging of therapeutic effect

Sajja, H. K., East, M. P., Mao, H., Wang, Y. A., Nie, S. & Yang, L., Mar 1 2009, In : Current Drug Discovery Technologies. 6, 1, p. 43-51 9 p.

Research output: Contribution to journalReview article

Therapeutic Uses
Nanoparticles
Pharmaceutical Preparations
Nanomedicine
Neoplasms

Discovery Through the Computational Microscope

Lee, E. H., Hsin, J., Sotomayor, M., Comellas, G. & Schulten, K., Oct 14 2009, In : Structure. 17, 10, p. 1295-1306 12 p.

Research output: Contribution to journalReview article

Molecular Dynamics Simulation
Ankyrins
Connectin
Cadherins
Fibrinogen

FRET and mechanobiology

Wang, Y. & Wang, N., Dec 1 2009, In : Integrative Biology. 1, 10, p. 565-573 9 p.

Research output: Contribution to journalReview article

Biophysics
Fluorescence Resonance Energy Transfer
Biosensing Techniques
Biosensors
Proteins

Imaging engineered tissues using structural and functional optical coherence tomography

Liang, X., Graf, B. W. & Boppart, S. A., Nov 1 2009, In : Journal of Biophotonics. 2, 11, p. 643-655 13 p.

Research output: Contribution to journalReview article

Optical tomography
Optical Coherence Tomography
tomography
Tissue
Imaging techniques

Industrial biotechnology: Tools and applications

Tang, W. L. & Zhao, H., Dec 1 2009, In : Biotechnology Journal. 4, 12, p. 1725-1739 15 p.

Research output: Contribution to journalReview article

Biotechnology
Synthetic Biology
Industrial Waste
Metabolic Engineering
Protein Engineering

International Journal of Adaptive Control and Signal Processing: Editorial

Bentsman, J. & Orlov, Y., Feb 1 2009, In : International Journal of Adaptive Control and Signal Processing. 23, 2, p. 111-113 3 p.

Research output: Contribution to journalReview article

Signal processing
Fault detection

Mechanics of stretchable inorganic electronic materials

Song, J., Jiang, H., Huang, Y. & Rogers, J. A., Sep 21 2009, In : Journal of Vacuum Science and Technology A: Vacuum, Surfaces and Films. 27, 5, p. 1107-1125 19 p.

Research output: Contribution to journalReview article

Mechanics
inorganic materials
electronics
ribbons
mesh

Mechanobiology of the skeleton

Turner, C. H., Warden, S. J., Bellido, T., Plotkin, L. I., Kumar, N., Jasiuk, I., Danzig, J. & Robling, A. G., Apr 28 2009, In : Science Signaling. 2, 68, p. pt3

Research output: Contribution to journalReview article

Biophysics
Skeleton
Bone
Bone and Bones
Osteocytes

Modelling of high-enthalpy, high-Mach number flows

Degrez, G., Lani, A., Panesi, M., Chazot, O. & Deconinck, H., Nov 9 2009, In : Journal of Physics D: Applied Physics. 42, 19, 194004.

Research output: Contribution to journalReview article

Mach number
Enthalpy
enthalpy
chemical equilibrium
hypersonic reentry

Molecular dynamics simulations of membrane channels and transporters

Khalili-Araghi, F., Gumbart, J., Wen, P. C., Sotomayor, M., Tajkhorshid, E. & Schulten, K., Apr 1 2009, In : Current Opinion in Structural Biology. 19, 2, p. 128-137 10 p.

Research output: Contribution to journalReview article

Membrane Transport Proteins
Molecular Dynamics Simulation
Ion Channels
Aquaporins
Proteins

Nomenclature for factors of the SLA system, update 2008

Ho, C. S., Lunney, J. K., Ando, A., Rogel-Gaillard, C., Lee, J. H., Schook, L. B. & Smith, D. M., Apr 2009, In : Tissue Antigens. 73, 4, p. 307-315 9 p.

Research output: Contribution to journalReview article

Terminology
Alleles
swine leukocyte antigen
Databases
Major Histocompatibility Complex

Programming structure into 3D nanomaterials

Van Gough, D., Juhl, A. T. & Braun, P. V., Jun 1 2009, In : Materials Today. 12, 6, p. 28-35 8 p.

Research output: Contribution to journalReview article

solar energy
energy storage
programming
Nanostructured materials
delivery

Protein dynamics: From molecules, to interactions, to biology

Gruebele, M., Mar 1 2009, In : International journal of molecular sciences. 10, 3, p. 1360-1368 9 p.

Research output: Contribution to journalReview article

biology
proteins
Proteins
Molecules
molecules

Protein engineering in designing tailored enzymes and microorganisms for biofuels production

Wen, F., Nair, N. U. & Zhao, H., Aug 1 2009, In : Current Opinion in Biotechnology. 20, 4, p. 412-419 8 p.

Research output: Contribution to journalReview article

Protein Engineering
Biofuels
Microorganisms
Enzymes
Proteins

Protein-membrane interactions: Blood clotting on nanoscale bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Rienstra, C. M., Kijac, A. Z., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 4 2009, In : Journal of Thrombosis and Haemostasis. 7, SUPPL. 1, p. 169-172 4 p.

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Membrane Proteins
Peptide Hydrolases
Membrane Microdomains

Recognizing textual entailment: Rational, evaluation and approaches

Dagan, I., Dolan, B., Magnini, B. & Roth, D., Oct 2009, In : Natural Language Engineering. 15, 4

Research output: Contribution to journalReview article

Knowledge representation
learning method
language
evaluation
Semantics

Segmental dynamics in polymers: From cold melts to ageing and stressed glasses

Chen, K., Saltzman, E. J. & Schweizer, K. S., Dec 18 2009, In : Journal of Physics Condensed Matter. 21, 50, 503101.

Research output: Contribution to journalReview article

Polymers
Aging of materials
Glass
glass
polymers

The parallelization of video processing: From programming models to applications

Lin, D., Huang, X., Nguyen, Q., Blackburn, J., Rodrigues, C., Huang, T. S., Do, M. N., Patel, S. J. & Hwu, W-M. W., Jan 1 2009, In : IEEE Signal Processing Magazine. 26, 6, p. 103-112 10 p.

Research output: Contribution to journalReview article

Video Processing
Parallelization
Programming Model
Digital Video
Processing

Ultrathin films of single-walled carbon nanotubes for electronics and sensors: A review of fundamental and applied aspects

Cao, Q. & Rogers, J. A., Jan 5 2009, In : Advanced Materials. 21, 1, p. 29-53 25 p.

Research output: Contribution to journalReview article

Ultrathin films
Single-walled carbon nanotubes (SWCN)
Electronic equipment
Sensors
Optoelectronic devices
2008

Advances in single-molecule fluorescence methods for molecular biology

Joo, C., Balci, H., Ishitsuka, Y., Buranachai, C. & Ha, T., Sep 25 2008, In : Annual review of biochemistry. 77, p. 51-76 26 p.

Research output: Contribution to journalReview article

Molecular biology
Molecular Biology
Fluorescence
Molecules
Arsenals

Advantages and application of label-free detection assays in drug screening

Cunningham, B. T. & Laing, L. G., Aug 1 2008, In : Expert Opinion on Drug Discovery. 3, 8, p. 891-901 11 p.

Research output: Contribution to journalReview article

Preclinical Drug Evaluations
Biosensing Techniques
Drug Discovery
Optics and Photonics
Technology

A practical guide to single-molecule FRET

Roy, R., Hohng, S. & Ha, T., Jun 1 2008, In : Nature Methods. 5, 6, p. 507-516 10 p.

Research output: Contribution to journalReview article

Fluorescence Resonance Energy Transfer
Molecules
Research Design
Software
Costs and Cost Analysis

Automatic detection of multiple pavement layers from GPR data

Lahouar, S. & Al-Qadi, I. L., Mar 1 2008, In : NDT and E International. 41, 2, p. 69-81 13 p.

Research output: Contribution to journalReview article

pavements
ground penetrating radar
radar data
Pavements
Radar

Blood clotting reactions on nanoscale phospholipid bilayers

Morrissey, J. H., Pureza, V., Davis-Harrison, R. L., Sligar, S. G., Ohkubo, Y. Z. & Tajkhorshid, E., Aug 6 2008, In : Thrombosis Research. 122, SUPPL.1, p. S23-S26

Research output: Contribution to journalReview article

Blood Coagulation
Phospholipids
Phosphatidylserines
Factor VIIa
Membranes

Chapter 5 Quantitative Phase Imaging of Nanoscale Cell Structure and Dynamics

Popescu, G., Jan 1 2008, In : Methods in Cell Biology. 90, C, p. 87-115 29 p.

Research output: Contribution to journalReview article

Technology

Contributions of capillary electrophoresis to neuroscience

Lapainis, T. & Sweedler, J. V., Mar 14 2008, In : Journal of Chromatography A. 1184, 1-2, p. 144-158 15 p.

Research output: Contribution to journalReview article

Capillary electrophoresis
Molecules
Neurons
Sampling
Peptides

Design of crystallization processes from laboratory research and development to the manufacturing scale: Part I

Kee, N. C. S., Xing, Y. W., Li, M. G., Rusli, E., He, G., Bhamidi, V., Tan, R. B. H., Kenis, P. J. A., Zukoski, C. F. & Braatz, R. D., Nov 17 2008, In : American Pharmaceutical Review. 11, 5

Research output: Contribution to journalReview article

Crystallization
Research

Detection of nitric oxide in single cells

Ye, X., Rubakhin, S. & Sweedler, J. V., Apr 1 2008, In : Analyst. 133, 4, p. 423-433 11 p.

Research output: Contribution to journalReview article

Nitric oxide
nitric oxide
Nitric Oxide
Nitric Oxide Synthase
Electrochemistry

Efficient numerical solution of the 3-D semiconductor poisson equation for Monte Carlo device simulation

Aksamija, Z. & Ravaioli, U., Dec 1 2008, In : CMES - Computer Modeling in Engineering and Sciences. 37, 1, p. 45-63 19 p.

Research output: Contribution to journalReview article

Device Simulation
Poisson equation
Poisson's equation
3D
Semiconductors

Electrical/electrochemical impedance for rapid detection of foodborne pathogenic bacteria

Yang, L. & Bashir, R., Mar 1 2008, In : Biotechnology Advances. 26, 2, p. 135-150 16 p.

Research output: Contribution to journalReview article

Electric Impedance
Biosensors
Bacteria
Microbiology
Biosensing Techniques

Electronic dispersion compensation: An overview of optical communications systems

Singer, A. C., Shanbhag, N. R. & Bae, H. M., Jan 1 2008, In : IEEE Signal Processing Magazine. 25, 6, p. 110-130 21 p.

Research output: Contribution to journalReview article

Dispersion Compensation
Dispersion compensation
Optical links
Optical Communication
Optical communication

Environmental support: An integrative framework

Morrow, D. G. & Rogers, W., Aug 1 2008, In : Human Factors. 50, 4, p. 589-613 25 p.

Research output: Contribution to journalReview article

Human engineering
age difference
Environment Design
performance
Task Performance and Analysis

Exposing plasmids as the Achilles' heel of drug-resistant bacteria

Williams, J. J. & Hergenrother, P., Aug 1 2008, In : Current Opinion in Chemical Biology. 12, 4, p. 389-399 11 p.

Research output: Contribution to journalReview article

Bacteria
Plasmids
Pharmaceutical Preparations
Anti-Bacterial Agents
Antitoxins

Finite element analysis of complex antennas and arrays

Jin, J., Lou, Z., Li, Y. J., Riley, N. W. & Riley, D. J., Aug 25 2008, In : IEEE Transactions on Antennas and Propagation. 56, 8 I, p. 2222-2240 19 p.

Research output: Contribution to journalReview article

antennas
Antennas
Finite element method
Boundary conditions
boundary conditions

Genes and social behavior

Robinson, G. E., Fernald, R. D. & Clayton, D. F., Nov 7 2008, In : Science. 322, 5903, p. 896-900 5 p.

Research output: Contribution to journalReview article

Social Behavior
Brain
Genes
Systems Biology
Regulator Genes

Genetic and genomic analyses of the division of labour in insect societies

Smith, C. R., Toth, A. L., Suarez, A. V. & Robinson, G. E., Oct 1 2008, In : Nature Reviews Genetics. 9, 10, p. 735-748 14 p.

Research output: Contribution to journalReview article

Reproduction
Insects
Research
Life History Traits

Herbaceous energy crop development: recent progress and future prospects

Heaton, E. A., Flavell, R. B., Mascia, P. N., Thomas, S. R., Dohleman, F. G. & Long, S. P., Jun 1 2008, In : Current Opinion in Biotechnology. 19, 3, p. 202-209 8 p.

Research output: Contribution to journalReview article

Solar Energy
Crops
Biomass
Solar energy
Photosynthesis

Hydrogels used for cell-based drug delivery

Schmidt, J. J., Rowley, J. & Hyun, J. K., Dec 15 2008, In : Journal of Biomedical Materials Research - Part A. 87, 4, p. 1113-1122 10 p.

Research output: Contribution to journalReview article

Hydrogels
Hydrogel
Drug delivery
Biocompatible Materials
Biomolecules

Identification of the cellular targets of bioactive small organic molecules using affinity reagents

Leslie, B. J. & Hergenrother, P. J., Jun 30 2008, In : Chemical Society Reviews. 37, 7, p. 1347-1360 14 p.

Research output: Contribution to journalReview article

Molecules
Experiments
Drug Discovery