Research Output

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2011

Single-molecule analysis reveals three phases of DNA degradation by an exonuclease

Lee, G., Yoo, J., Leslie, B. J. & Ha, T., Jun 2011, In : Nature chemical biology. 7, 6, p. 367-374 8 p.

Research output: Contribution to journalReview article

Some implications of biofuel development for engineering infrastructures in the United States

Ng, T. L., Cai, X. & Ouyang, Y., Sep 1 2011, In : Biofuels, Bioproducts and Biorefining. 5, 5, p. 581-592 12 p.

Research output: Contribution to journalReview article

Statistical Mechanics of Horizontal Gene Transfer in Evolutionary Ecology

Chia, N. & Goldenfeld, N., Apr 1 2011, In : Journal of Statistical Physics. 142, 6, p. 1287-1301 15 p.

Research output: Contribution to journalReview article

Strategies for regeneration of the bone using porcine adult adipose-derived mesenchymal stem cells

Monaco, E., Bionaz, M., Hollister, S. J. & Wheeler, M. B., May 2011, In : Theriogenology. 75, 8, p. 1381-1399 19 p.

Research output: Contribution to journalReview article

Superfluid 3He-the early days

Lee, D. M. & Leggett, A. J., Aug 1 2011, In : Journal of Low Temperature Physics. 164, 3-4, p. 140-172 33 p.

Research output: Contribution to journalReview article

Surface functionalization of thin-film diamond for highly stable and selective biological interfaces

Stavis, C., Clare, T. L., Butler, J. E., Radadia, A. D., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Bashir, R. & Hamers, R. J., Jan 18 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 3, p. 983-988 6 p.

Research output: Contribution to journalReview article

Synthesis, assembly and applications of semiconductor nanomembranes

Rogers, J. A., Lagally, M. G. & Nuzzo, R. G., Sep 1 2011, In : Nature. 477, 7362, p. 45-53 9 p.

Research output: Contribution to journalReview article

Synthetic biology: Putting synthesis into biology

Liang, J., Luo, Y. & Zhao, H., Jan 1 2011, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 3, 1, p. 7-20 14 p.

Research output: Contribution to journalReview article

The ATP-cytokine-adenosine hypothesis: How the brain translates past activity into sleep

Sengupta, P., Roy, S. & Krueger, J. M., Feb 1 2011, In : Sleep and Biological Rhythms. 9, SUPPL. 1, p. 29-33 5 p.

Research output: Contribution to journalReview article

The challenges of integrating molecular imaging into the optimization of cancer therapy

Patel, G. S., Kiuchi, T., Lawler, K., Ofo, E., Fruhwirth, G. O., Kelleher, M., Shamil, E., Zhang, R., Selvin, P. R., Santis, G., Spicer, J., Woodman, N., Gillett, C. E., Barber, P. R., Vojnovic, B., Kéri, G., Schaeffter, T., Goh, V., O'Doherty, M. J., Ellis, P. A. & 1 others, Ng, T., Jun 1 2011, In : Integrative Biology. 3, 6, p. 603-631 29 p.

Research output: Contribution to journalReview article

The effect of keratoconus on the structural, mechanical, and optical properties of the cornea

Ambekar, R., Toussaint, K. C. & Wagoner Johnson, A., Apr 1 2011, In : Journal of the Mechanical Behavior of Biomedical Materials. 4, 3, p. 223-236 14 p.

Research output: Contribution to journalReview article

The enzyme function initiative

Gerlt, J. A., Allen, K. N., Almo, S. C., Armstrong, R. N., Babbitt, P. C., Cronan, J. E., Dunaway-Mariano, D., Imker, H. J., Jacobson, M. P., Minor, W., Poulter, C. D., Raushel, F. M., Sali, A., Shoichet, B. K. & Sweedler, J. V., Nov 22 2011, In : Biochemistry. 50, 46, p. 9950-9962 13 p.

Research output: Contribution to journalReview article

The global potential for Agave as a biofuel feedstock

Davis, S. C., Dohleman, F. G. & Long, S. P., Feb 2011, In : GCB Bioenergy. 3, 1, p. 68-78 11 p.

Research output: Contribution to journalReview article

The primordial lithium problem

Fields, B. D., Nov 7 2011, In : Annual Review of Nuclear and Particle Science. 61, p. 47-68 22 p.

Research output: Contribution to journalReview article

Transcript profiling and RNA interference as tools to identify small molecule mechanisms and therapeutic potential

Palchaudhuri, R. & Hergenrother, P. J., Jan 21 2011, In : ACS chemical biology. 6, 1, p. 21-32 12 p.

Research output: Contribution to journalReview article

Triggered release from polymer capsules

Esser-Kahn, A. P., Odom, S. A., Sottos, N. R., White, S. R. & Moore, J. S., Jul 26 2011, In : Macromolecules. 44, 14, p. 5539-5553 15 p.

Research output: Contribution to journalReview article

Virtual extension: Information seeking: Convergence of search, recommendations, and advertising

Garcia-Molina, H., Koutrika, G. & Parameswaran, A., Nov 1 2011, In : Communications of the ACM. 54, 11, p. 121-130 10 p.

Research output: Contribution to journalReview article

Wave passage and ground motion incoherency effects on seismic response of an extended bridge

Mwafy, A. M., Kwon, O. S., Elnashai, A. & Hashash, Y. M. A., May 1 2011, In : Journal of Bridge Engineering. 16, 3, p. 364-374 11 p.

Research output: Contribution to journalReview article

2010

A global-local approach to nonlinear system identification: A review

Lee, Y. S., Vakakis, A. F., McFarland, D. M. & Bergman, L., Nov 1 2010, In : Structural Control and Health Monitoring. 17, 7, p. 742-760 19 p.

Research output: Contribution to journalReview article

An experimental methodology to relate local strain to microstructural texture

Carroll, J., Abuzaid, W., Lambros, J. & Sehitoglu, H., Aug 1 2010, In : Review of Scientific Instruments. 81, 8, 083703.

Research output: Contribution to journalReview article

Anisotropic nanocrystal heterostructures: Synthesis and lattice strain

Shim, M. & McDaniel, H., Oct 2010, In : Current Opinion in Solid State and Materials Science. 14, 5, p. 83-94 12 p.

Research output: Contribution to journalReview article

A novel platform for in situ investigation of cells and tissues under mechanical strain

Ahmed, W. W., Kural, M. H. & Saif, M. T. A., Aug 2010, In : Acta Biomaterialia. 6, 8, p. 2979-2990 12 p.

Research output: Contribution to journalReview article

A review of new analytic techniques for quantifying symmetry in locomotion

Hsiao-Wecksler, E. T., Polk, J. D., Rosengren, K. S., Sosnoff, J. J. & Hong, S., Jun 1 2010, In : Symmetry. 2, 2, p. 1135-1155 21 p.

Research output: Contribution to journalReview article

Brunswikian theory and method as a foundation for simulation-based research on clinical judgment

Kirlik, A., Oct 1 2010, In : Simulation in Healthcare. 5, 5, p. 255-259 5 p.

Research output: Contribution to journalReview article

Capturing functional motions of membrane channels and transporters with molecular dynamics simulation

Shaikh, S. A., Wen, P. C., Enkavi, G., Huang, Z. & Tajkhorshid, E., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2481-2500 20 p.

Research output: Contribution to journalReview article

Ceramics and ceramic matrix composites for heat exchangers in advanced thermal systems-A review

Sommers, A., Wang, Q., Han, X., T'Joen, C., Park, Y. & Jacobi, A. M., Aug 1 2010, In : Applied Thermal Engineering. 30, 11-12, p. 1277-1291 15 p.

Research output: Contribution to journalReview article

Dynamic optical coherence elastography: A review

Liang, X., Crecea, V. & Boppart, S. A., Oct 1 2010, In : Journal of Innovative Optical Health Sciences. 3, 4, p. 221-233 13 p.

Research output: Contribution to journalReview article

Electroreduction of dioxygen for fuel-cell applications: Materials and challenges

Gewirth, A. A. & Thorum, M. S., Apr 19 2010, In : Inorganic Chemistry. 49, 8, p. 3557-3566 10 p.

Research output: Contribution to journalReview article

Enzymatic corn wet milling process: Enzyme optimization & commercial trial

Singh, V., Johnston, D. B. & Neoh, S. L., Feb 1 2010, In : Industrial Biotechnology. 6, 1, p. 34-40 7 p.

Research output: Contribution to journalReview article

Experimental and computational determination of tRNA dynamics

Alexander, R. W., Eargle, J. & Luthey-Schulten, Z., Jan 21 2010, In : FEBS Letters. 584, 2, p. 376-386 11 p.

Research output: Contribution to journalReview article

Exploring transmembrane diffusion pathways with molecular dynamics

Wang, Y., Shaikh, S. A. & Tajkhorshid, E., Jun 2010, In : Physiology. 25, 3, p. 142-154 13 p.

Research output: Contribution to journalReview article

Feedstocks for lignocellulosic biofuels

Somerville, C., Youngs, H., Taylor, C., Davis, S. C. & Long, S. P., Aug 13 2010, In : Science. 329, 5993, p. 790-792 3 p.

Research output: Contribution to journalReview article

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

Fourier transform light scattering (FTLS) of cells and tissues

Ding, H., Wang, Z., Nguyen, F. T., Boppart, S. A., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. D. & Popescu, G., Dec 1 2010, In : Journal of Computational and Theoretical Nanoscience. 7, 12, p. 2501-2511 11 p.

Research output: Contribution to journalReview article

Fourier transform light scattering of biological structure and dynamics

Ding, H., Berl, E., Wang, Z., Millet, L. J., Gillette, M. U., Liu, J., Boppart, M. & Popescu, G., Jul 1 2010, In : IEEE Journal on Selected Topics in Quantum Electronics. 16, 4, p. 909-918 10 p., 5443519.

Research output: Contribution to journalReview article

Fractionalize this

Phillips, P., Dec 2010, In : Nature Physics. 6, 12, p. 931-933 3 p.

Research output: Contribution to journalReview article

Hybrid lattice particle modelling approach for polymeric materials subject to high strain rate loads

Wang, G., Cheng, A. H. D., Ostoja-Starzewski, M., Al-Ostaz, A. & Radziszewski, P., Mar 1 2010, In : Polymers. 2, 1, p. 3-30 28 p.

Research output: Contribution to journalReview article

Inching over hurdles: How DNA helicases move on crowded lattices

Spies, M. & Ha, T., May 1 2010, In : Cell Cycle. 9, 9, p. 1742-1749 8 p.

Research output: Contribution to journalReview article

In situ uniaxial mechanical testing of small scale materials - A review

Kang, W., Rajagopalan, J. & Saif, M. T. A., Dec 2010, In : Nanoscience and Nanotechnology Letters. 2, 4, p. 282-287 6 p.

Research output: Contribution to journalReview article

Instability, intermixing and electronic structure at the epitaxial LaAlO3SrTiO3(001) heterojunction

Chambers, S. A., Engelhard, M. H., Shutthanandan, V., Zhu, Z., Droubay, T. C., Qiao, L., Sushko, P. V., Feng, T., Lee, H. D., Gustafsson, T., Garfunkel, E., Shah, A. B., Zuo, J. M. & Ramasse, Q. M., Oct 2010, In : Surface Science Reports. 65, 10-12, p. 317-352 36 p.

Research output: Contribution to journalReview article

Materials and mechanics for stretchable electronics

Rogers, J. A., Someya, T. & Huang, Y., Mar 26 2010, In : Science. 327, 5973, p. 1603-1607 5 p.

Research output: Contribution to journalReview article

Memory models: A case for rethinking parallel languages and hardware

Adve, S. V. & Boehm, H. J., Aug 1 2010, In : Communications of the ACM. 53, 8, p. 90-101 12 p.

Research output: Contribution to journalReview article

Metal-catalyzed semiconductor nanowires: A review on the control of growth directions

Fortuna, S. A. & Li, X., Feb 22 2010, In : Semiconductor Science and Technology. 25, 2, 024005.

Research output: Contribution to journalReview article

Microscopic imaging and spectroscopy with scattered light

Boustany, N. N., Boppart, S. A. & Backman, V., Aug 15 2010, In : Annual Review of Biomedical Engineering. 12, p. 285-314 30 p.

Research output: Contribution to journalReview article

Molecular diagnostic and drug delivery agents based on aptamer-nanomaterial conjugates

Lee, J. H., Yigit, M. V., Mazumdar, D. & Lu, Y., Apr 1 2010, In : Advanced Drug Delivery Reviews. 62, 6, p. 592-605 14 p.

Research output: Contribution to journalReview article

More than taking the heat: crops and global change.

Long, S. P. & Ort, D. R., Jun 1 2010, In : Current opinion in plant biology. 13, 3, p. 241-248 8 p.

Research output: Contribution to journalReview article

Multidimensional architectures for functional optical devices

Arpin, K. A., Mihi, A., Johnson, H. T., Baca, A. J., Rogers, J. A., Lewis, J. A. & Braun, P. V., Mar 12 2010, In : Advanced Materials. 22, 10, p. 1084-1101 18 p.

Research output: Contribution to journalReview article

Nanofluidics in chemical analysis

Piruska, A., Gong, M., Sweedler, J. V. & Bohn, P. W., Mar 1 2010, In : Chemical Society Reviews. 39, 3, p. 1060-1072 13 p.

Research output: Contribution to journalReview article

Nanopore sensors for nucleic acid analysis

Venkatesan, B. M. & Bashir, R., Oct 2010, In : Nature Nanotechnology. 6, 10, p. 615-624 10 p.

Research output: Contribution to journalReview article

Progress review of electromagnetic compatibility analysis technologies for packages, printed circuit boards, and novel interconnects

Li, E. P., Wei, X. C., Cangellaris, A. C., Liu, E. X., Zhang, Y. J., D'amore, M., Kim, J. & Sudo, T., May 1 2010, In : IEEE Transactions on Electromagnetic Compatibility. 52, 2, p. 248-265 18 p., 5464324.

Research output: Contribution to journalReview article