Research Output

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Review article
2014

Aquatic interfaces: A hydrodynamic and ecological perspective

Marion, A., Nikora, V., Puijalon, S., Bouma, T., Koll, K., Ballio, F., Tait, S., Zaramella, M., Sukhodolov, A., O'Hare, M., Wharton, G., Aberle, J., Tregnaghi, M., Davies, P., Nepf, H., Parker, G. & Statzner, B., Nov 2 2014, In : Journal of Hydraulic Research. 52, 6, p. 744-758 15 p.

Research output: Contribution to journalReview article

Brain circadian oscillators and redox regulation in mammals

Gillette, M. U. & Wang, T. A., Jun 20 2014, In : Antioxidants and Redox Signaling. 20, 18, p. 2955-2965 11 p.

Research output: Contribution to journalReview article

Breakthroughs in Photonics 2013: Quantitative Phase Imaging: Metrology Meets Biology

Kim, T., Zhou, R., Goddard, L. L. & Popescu, G., Apr 1 2014, In : IEEE Photonics Journal. 6, 2, 0700909.

Research output: Contribution to journalReview article

Cadherin adhesion and mechanotransduction

Leckband, D. E. & de Rooij, J., Jan 1 2014, In : Annual review of cell and developmental biology. 30, p. 291-315 25 p.

Research output: Contribution to journalReview article

Cationic liposome-nucleic acid complexes for gene delivery and gene silencing

Safinya, C. R., Ewert, K. K., Majzoub, R. N. & Leal, C., Nov 1 2014, In : New Journal of Chemistry. 38, 11, p. 5164-5172 9 p.

Research output: Contribution to journalReview article

Causal reasoning with mental models

Khemlani, S. S., Barbey, A. K. & Johnson-Laird, P. N., Oct 28 2014, In : Frontiers in Human Neuroscience. 8, October, 849.

Research output: Contribution to journalReview article

Cell and tissue engineering for liver disease

Bhatia, S. N., Underhill, G. H., Zaret, K. S. & Fox, I. J., Jul 16 2014, In : Science Translational Medicine. 6, 245, 245sr2.

Research output: Contribution to journalReview article

Circadian gating of neuronal functionality: A basis for iterative metaplasticity

Iyer, R., Wang, T. A. & Gillette, M. U., Sep 19 2014, In : Frontiers in Systems Neuroscience. 8

Research output: Contribution to journalReview article

Close encounters with DNA

Maffeo, C., Yoo, J., Comer, J., Wells, D. B., Luan, B. & Aksimentiev, A., Oct 15 2014, In : Journal of Physics Condensed Matter. 26, 41, 413101.

Research output: Contribution to journalReview article

Coherent anti-Stokes Raman scattering microscopy: Overcoming technical barriers for clinical translation

Tu, H. & Boppart, S. A., Jan 1 2014, In : Journal of Biophotonics. 7, 1-2, p. 9-22 14 p.

Research output: Contribution to journalReview article

Critical review: Effects of complex interactions on structure and dynamics of supported metal catalysts

Frenkel, A. I., Cason, M. W., Elsen, A., Jung, U., Small, M. W., Nuzzo, R. G., Vila, F. D., Rehr, J. J., Stach, E. A. & Yang, J. C., Mar 1 2014, In : Journal of Vacuum Science and Technology A: Vacuum, Surfaces and Films. 32, 2, 020801.

Research output: Contribution to journalReview article

Data access for the 1,000 Plants (1KP) project

Matasci, N., Hung, L. H., Yan, Z., Carpenter, E. J., Wickett, N. J., Mirarab, S., Nguyen, N., Warnow, T., Ayyampalayam, S., Barker, M., Burleigh, J. G., Gitzendanner, M. A., Wafula, E., Der, J. P., dePamphilis, C. W., Roure, B., Philippe, H., Ruhfel, B. R., Miles, N. W., Graham, S. W. & 24 others, Mathews, S., Surek, B., Melkonian, M., Soltis, D. E., Soltis, P. S., Rothfels, C., Pokorny, L., Shaw, J. A., DeGironimo, L., Stevenson, D. W., Villarreal, J. C., Chen, T., Kutchan, T. M., Rolf, M., Baucom, R. S., Deyholos, M. K., Samudrala, R., Tian, Z., Wu, X., Sun, X., Zhang, Y., Wang, J., Leebens-Mack, J. & Wong, G. K. S., Oct 27 2014, In : GigaScience. 3, 1, 17.

Research output: Contribution to journalReview article

Designed-in security for cyber-physical systems

Peisert, S., Margulies, J., Nicol, D. M., Khurana, H. & Sawall, C., Sep 2014, In : IEEE Security and Privacy. 12, 5, p. 9-12 4 p., 6924670.

Research output: Contribution to journalReview article

DNA aptamer technology for personalized medicine

Xing, H., Hwang, K., Li, J., Torabi, S. F. & Lu, Y., May 2014, In : Current Opinion in Chemical Engineering. 4, p. 79-87 9 p.

Research output: Contribution to journalReview article

DNA assembly techniques for next-generation combinatorial biosynthesis of natural products

Cobb, R. E., Ning, J. C. & Zhao, H., Feb 1 2014, In : Journal of Industrial Microbiology and Biotechnology. 41, 2, p. 469-477 9 p.

Research output: Contribution to journalReview article

DNA as sensors and imaging agents for metal ions

Xiang, Y. & Lu, Y., Feb 17 2014, In : Inorganic Chemistry. 53, 4, p. 1925-1942 18 p.

Research output: Contribution to journalReview article

Dropwise condensation on micro-and nanostructured surfaces

Enright, R., Miljkovic, N., Alvarado, J. L., Kim, K. & Rose, J. W., Jul 3 2014, In : Nanoscale and Microscale Thermophysical Engineering. 18, 3, p. 223-250 28 p.

Research output: Contribution to journalReview article

Effective field theory beyond the standard model

Willenbrock, S. & Zhang, C., Oct 1 2014, In : Annual Review of Nuclear and Particle Science. 64, p. 83-100 18 p.

Research output: Contribution to journalReview article

Effective spatial mapping for coupled code analysis of thermal-hydraulics/ neutron-kinetics of boiling water reactors

Peltonen, J., Ma, W. & Kozlowski, T., Jan 1 2014, In : Annals of Nuclear Energy. 63, p. 461-485 25 p.

Research output: Contribution to journalReview article

Electrified vehicles and the smart grid: The ITS perspective

Cheng, X., Hu, X., Yang, L., Husain, I., Inoue, K., Krein, P., Lefevre, R., Li, Y., Nishi, H., Taiber, J. G., Wang, F. Y., Zha, Y., Gao, W. & Li, Z., Aug 2014, In : IEEE Transactions on Intelligent Transportation Systems. 15, 4, p. 1388-1404 17 p., 6869118.

Research output: Contribution to journalReview article

Energy positive domestic wastewater treatment: The roles of anaerobic and phototrophic technologies

Shoener, B. D., Bradley, I. M., Cusick, R. D. & Guest, J. S., Jun 2014, In : Environmental Sciences: Processes and Impacts. 16, 6, p. 1204-1222 19 p.

Research output: Contribution to journalReview article

Expanding the scope of site-specific recombinases for genetic and metabolic engineering

Gaj, T., Sirk, S. J. & Barbas, C. F., Jan 1 2014, In : Biotechnology and bioengineering. 111, 1, p. 1-15 15 p.

Research output: Contribution to journalReview article

Experimental behavior of steel fixed bearings and implications for seismic bridge response

Steelman, J. S., Filipov, E. T., Fahnestock, L. A., Revell, J. R., Lafave, J. M., Hajjar, J. F. & Foutch, D. A., Aug 1 2014, In : Journal of Bridge Engineering. 19, 8, A4014007.

Research output: Contribution to journalReview article

Exploiting Issatchenkia orientalis SD108 for succinic acid production

Xiao, H., Shao, Z., Jiang, Y., Dole, S. & Zhao, H., Aug 27 2014, In : Microbial cell factories. 13, 1, 121.

Research output: Contribution to journalReview article

Extremely Soft: Design with Rheologically Complex Fluids

Ewoldt, R. H., Mar 1 2014, In : Soft Robotics. 1, 1, p. 12-20 9 p.

Research output: Contribution to journalReview article

Flavor structure of the nucleon sea

Chang, W. C. & Peng, J. C., Nov 2014, In : Progress in Particle and Nuclear Physics. 79, p. 95-135 41 p.

Research output: Contribution to journalReview article

Functional DNA nanomaterials for sensing and imaging in living cells

Torabi, S. F. & Lu, Y., Aug 1 2014, In : Current Opinion in Biotechnology. 28, p. 88-95 8 p.

Research output: Contribution to journalReview article

Functional tuning and expanding of myoglobin by rational protein design

Lin, Y., Wang, J. & Lu, Y., Mar 2014, In : Science China Chemistry. 57, 3, p. 346-355 10 p.

Research output: Contribution to journalReview article

Hot spots in energetic materials generated by infrared and ultrasound, detected by thermal imaging microscopy

Chen, M. W., You, S., Suslick, K. S. & Dlott, D. D., Feb 1 2014, In : Review of Scientific Instruments. 85, 2, 023705.

Research output: Contribution to journalReview article

Hydrothermal liquefaction for algal biorefinery: A critical review

Tian, C., Li, B., Liu, Z., Zhang, Y. & Lu, H., Oct 2014, In : Renewable and Sustainable Energy Reviews. 38, p. 933-950 18 p.

Research output: Contribution to journalReview article

Imaging lipids with secondary ion mass spectrometry

Kraft, M. L. & Klitzing, H. A., Aug 2014, In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1841, 8, p. 1108-1119 12 p.

Research output: Contribution to journalReview article

Interventions to reduce rehospitalizations after chronic obstructive pulmonary disease exacerbations: A systematic review

Prieto-Centurion, V., Markos, M. A., Ramey, N. I., Gussin, H. A., Nyenhuis, S. M., Joo, M. J., Prasad, B., Bracken, N., DiDomenico, R., Godwin, P. O., Jaffe, H. A., Kalhan, R., Pickard, A. S., Pittendrigh, B. R., Schatz, B., Sullivan, J. L., Thomashow, B. M., Williams, M. V. & Krishnan, J. A., Mar 2014, In : Annals of the American Thoracic Society. 11, 3, p. 417-424 8 p.

Research output: Contribution to journalReview article

Introduction to the special issue on learning semantics

Bordes, A., Bottou, L., Collobert, R., Roth, D., Weston, J. & Zettlemoyer, L., Feb 1 2014, In : Machine Learning. 94, 2, p. 127-131 5 p.

Research output: Contribution to journalReview article

Lens models of herschel-selected galaxies from high-resolution near-IR observations

Calanog, J. A., Fu, H., Cooray, A., Wardlow, J., Ma, B., Amber, S., Baker, A. J., Baes, M., Bock, J., Bourne, N., Bussmann, R. S., Casey, C. M., Chapman, S. C., Clements, D. L., Conley, A., Dannerbauer, H., De Zotti, G., Dunne, L., Dye, S., Eales, S. & 22 others, Farrah, D., Furlanetto, C., Harris, A. I., Ivison, R. J., Kim, S., Maddox, S. J., Magdis, G., Messias, H., Michałlowski, M. J., Negrello, M., Nightingale, J., O'Bryan, J. M., Oliver, S. J., Riechers, D., Scott, D., Serjeant, S., Simpson, J., Smith, M., Timmons, N., Thacker, C., Valiante, E. & Vieira, J. D., Dec 20 2014, In : Astrophysical Journal. 797, 2, 138.

Research output: Contribution to journalReview article

Looking in the right direction Carl Woese and evolutionary biology

Goldenfeld, N., Jan 1 2014, In : RNA Biology. 11, 3, p. 248-253 6 p.

Research output: Contribution to journalReview article

Materials chemistry in 3D templates for functional photonics

Braun, P. V., Jan 14 2014, In : Chemistry of Materials. 26, 1, p. 277-286 10 p.

Research output: Contribution to journalReview article

McGehee et al. Reply

McGehee, W. R., Kondov, S. S., Xu, W., Zirbel, J. J. & DeMarco, B. L., Aug 26 2014, In : Physical review letters. 113, 9, 099602.

Research output: Contribution to journalReview article

Metalloenzyme design and engineering through strategic modifications of native protein scaffolds

Petrik, I. D., Liu, J. & Lu, Y., Apr 1 2014, In : Current Opinion in Chemical Biology. 19, 1, p. 67-75 9 p.

Research output: Contribution to journalReview article

Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers

Liu, J., Chakraborty, S., Hosseinzadeh, P., Yu, Y., Tian, S., Petrik, I., Bhagi, A. & Lu, Y., Apr 23 2014, In : Chemical reviews. 114, 8, p. 4366-4369 4 p.

Research output: Contribution to journalReview article

Methods to study the tumor microenvironment under controlled oxygen conditions

Byrne, M. B., Leslie, M. T., Gaskins, H. R. & Kenis, P. J. A., Nov 1 2014, In : Trends in Biotechnology. 32, 11, p. 556-563 8 p.

Research output: Contribution to journalReview article

Microstructures and properties of high-entropy alloys

Zhang, Y., Zuo, T. T., Tang, Z., Gao, M. C., Dahmen, K. A., Liaw, P. K. & Lu, Z. P., Apr 2014, In : Progress in Materials Science. 61, p. 1-93 93 p.

Research output: Contribution to journalReview article

Monodromy inflation in SUSY QCD

Dine, M., Draper, P. & Monteux, A., Jul 2014, In : Journal of High Energy Physics. 2014, 7, 146.

Research output: Contribution to journalReview article

Motivational barriers to retention of at-risk young adults in HIV-prevention interventions: Perceived pressure and efficacy

Liu, J., Jones, C., Wilson, K., Durantini, M. R., Livingood, W. & Albarracín, D., Oct 3 2014, In : AIDS Care - Psychological and Socio-Medical Aspects of AIDS/HIV. 26, 10, p. 1242-1248 7 p.

Research output: Contribution to journalReview article

Nano/micro and spectroscopic approaches to food pathogen detection

Cho, I. H., Radadia, A. D., Farrokhzad, K., Ximenes, E., Bae, E., Singh, A. K., Oliver, H., Ladisch, M., Bhunia, A., Applegate, B., Mauer, L., Bashir, R. & Irudayaraj, J., Jun 2014, In : Annual Review of Analytical Chemistry. 7, p. 65-88 24 p.

Research output: Contribution to journalReview article

Nanoscale thermal transport. II. 2003-2012

Cahill, D. G., Braun, P. V., Chen, G., Clarke, D. R., Fan, S., Goodson, K. E., Keblinski, P., King, W. P., Mahan, G. D., Majumdar, A., Maris, H. J., Phillpot, S. R., Pop, E. & Shi, L., Mar 2014, In : Applied Physics Reviews. 1, 1, 011305.

Research output: Contribution to journalReview article

New technologies for measuring single cell mass

Popescu, G., Park, K., Mir, M. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 646-652 7 p.

Research output: Contribution to journalReview article

Novel phenomenology of parton distributions from the Drell-Yan process

Peng, J. C. & Qiu, J. W., May 1 2014, In : Progress in Particle and Nuclear Physics. 76, p. 43-75 33 p.

Research output: Contribution to journalReview article

Optical spectroscopy and velocity dispersions of galaxy clusters from the SPT-SZ survey

Ruel, J., Bazin, G., Bayliss, M., Brodwin, M., Foley, R. J., Stalder, B., Aird, K. A., Armstrong, R., Ashby, M. L. N., Bautz, M., Benson, B. A., Bleem, L. E., Bocquet, S., Carlstrom, J. E., Chang, C. L., Chapman, S. C., Cho, H. M., Clocchiatti, A., Crawford, T. M., Crites, A. T. & 62 others, De Haan, T., Desai, S., Dobbs, M. A., Dudley, J. P., Forman, W. R., George, E. M., Gladders, M. D., Gonzalez, A. H., Halverson, N. W., Harrington, N. L., High, F. W., Holder, G. P., Holzapfel, W. L., Hrubes, J. D., Jones, C., Joy, M., Keisler, R., Knox, L., Lee, A. T., Leitch, E. M., Liu, J., Lueker, M., Luong-Van, D., Mantz, A., Marrone, D. P., McDonald, M., McMahon, J. J., Mehl, J., Meyer, S. S., Mocanu, L., Mohr, J. J., Montroy, T. E., Murray, S. S., Natoli, T., Nurgaliev, D., Padin, S., Plagge, T., Pryke, C., Reichardt, C. L., Rest, A., Ruhl, J. E., Saliwanchik, B. R., Saro, A., Sayre, J. T., Schaffer, K. K., Shaw, L., Shirokoff, E., Song, J., Šuhada, R., Spieler, H. G., Stanford, S. A., Staniszewski, Z., Starsk, A. A., Story, K., Stubbs, C. W., Van Engelen, A., Vanderlinde, K., Vieira, J. D., Vikhlinin, A., Williamson, R., Zahn, O. & Zenteno, A., Sep 1 2014, In : Astrophysical Journal. 792, 1, 45.

Research output: Contribution to journalReview article

Outlier Detection for Temporal Data: A Survey

Gupta, M., Gao, J., Aggarwal, C. C. & Han, J., Sep 1 2014, In : IEEE Transactions on Knowledge and Data Engineering. 26, 9, p. 2250-2267 18 p., 6684530.

Research output: Contribution to journalReview article

Patient-specific flexible and stretchable devices for cardiac diagnostics and therapy

Gutbrod, S. R., Sulkin, M. S., Rogers, J. A. & Efimov, I. R., Aug 1 2014, In : Progress in Biophysics and Molecular Biology. 115, 2-3, p. 244-251 8 p.

Research output: Contribution to journalReview article