Research Output 1965 2020

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Review article
2016

Engineering microbial hosts for production of bacterial natural products

Zhang, M. M., Wang, Y., Ang, E. L. & Zhao, H., Aug 2016, In : Natural Product Reports. 33, 8, p. 963-987 25 p.

Research output: Contribution to journalReview article

Biological Products
Genetic Engineering
Actinobacteria
Genomics
Genetic engineering

Engineering Synthetic Gene Circuits in Living Cells with CRISPR Technology

Jusiak, B., Cleto, S., Perez-Piñera, P. & Lu, T. K., Jul 1 2016, In : Trends in Biotechnology. 34, 7, p. 535-547 13 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Synthetic Genes
Gene Regulatory Networks
Genes
Cells

Enhancing reproducibility for computational methods

Stodden, V., McNutt, M., Bailey, D. H., Deelman, E., Gil, Y., Hanson, B., Heroux, M. A., Ioannidis, J. P. A. & Taufer, M., Dec 9 2016, In : Science. 354, 6317, p. 1240-1241 2 p.

Research output: Contribution to journalReview article

Exercise and gut immune function: Evidence of alterations in colon immune cell homeostasis and microbiome characteristics with exercise training

Cook, M. D., Allen, J. M., Pence, B. D., Wallig, M. A., Gaskins, H. R., White, B. A. & Woods, J. A., Feb 1 2016, In : Immunology and Cell Biology. 94, 2, p. 158-163 6 p.

Research output: Contribution to journalReview article

Microbiota
Colon
Homeostasis
Dysbiosis
Exercise

Fluorescent nanoprobes for sensing and imaging of metal ions: Recent advances and future perspectives

Zhang, J. J., Cheng, F. F., Li, J. J., Zhu, J. J. & Lu, Y., Jun 1 2016, In : Nano Today. 11, 3, p. 309-329 21 p.

Research output: Contribution to journalReview article

Nanoprobes
Nanostructures
Nanostructured materials
Metal ions
Quantum Dots

Genome engineering using Adeno-associated virus: Basic and clinical research applications

Gaj, T., Epstein, B. E. & Schaffer, D. V., Mar 1 2016, In : Molecular Therapy. 24, 3, p. 458-464 7 p.

Research output: Contribution to journalReview article

Dependovirus
Genome
Research
Gene Targeting
Homologous Recombination

High-confidence software evolution

Gao, Q., Li, J., Xiong, Y., Hao, D., Xiao, X., Taneja, K., Zhang, L. & Xie, T., Jul 1 2016, In : Science China Information Sciences. 59, 7, 071101.

Research output: Contribution to journalReview article

Application programming interfaces (API)
Data storage equipment

High-resolution, hybrid optical trapping methods, and their application to nucleic acid processing proteins

Chemla, Y. R., Oct 1 2016, In : Biopolymers. p. 704-714 11 p.

Research output: Contribution to journalReview article

Optical Tweezers
Nucleic acids
Nucleic Acids
Proteins
Processing

Image science at JOSA A: Editorial

Carney, P. S., Oct 2016, In : Journal of the Optical Society of America A: Optics and Image Science, and Vision. 33, 10, p. ED8

Research output: Contribution to journalReview article

Intratumoral Heterogeneity of the Epigenome

Mazor, T., Pankov, A., Song, J. S. & Costello, J. F., Apr 11 2016, In : Cancer Cell. 29, 4, p. 440-451 12 p.

Research output: Contribution to journalReview article

Epigenomics
Genetic Heterogeneity
Drug Resistance
Neoplasms

Magnetomotive Optical Coherence Elastography for Magnetic Hyperthermia Dosimetry Based on Dynamic Tissue Biomechanics

Huang, P. C., Pande, P., Ahmad, A., Marjanovic, M., Spillman, D. R., Odintsov, B. & Boppart, S. A., Jul 2016, In : IEEE Journal of Selected Topics in Quantum Electronics. 22, 4, 7355327.

Research output: Contribution to journalReview article

biodynamics
Biomechanics
hyperthermia
Dosimetry
dosimeters

Mechanisms of fatigue crack growth - A critical digest of theoretical developments

Chowdhury, P. & Sehitoglu, H., Jun 1 2016, In : Fatigue and Fracture of Engineering Materials and Structures. 39, 6, p. 652-674 23 p.

Research output: Contribution to journalReview article

Fatigue crack propagation
Microstructure
Fatigue of materials
Engineers
Processing

Medical diagnostics with mobile devices: Comparison of intrinsic and extrinsic sensing

Kwon, L., Long, K. D., Wan, Y., Yu, H. & Cunningham, B. T., May 1 2016, In : Biotechnology Advances. 34, 3, p. 291-304 14 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Handheld Computers
Precision Medicine
Mobile devices
Equipment and Supplies

Micropatterned Hydrogel Surface with High-Aspect-Ratio Features for Cell Guidance and Tissue Growth

Hu, Y., You, J. O. & Aizenberg, J., Aug 31 2016, In : ACS Applied Materials and Interfaces. 8, 34, p. 21939-21945 7 p.

Research output: Contribution to journalReview article

Hydrogel
Hydrogels
Aspect ratio
Tissue
Cell culture

Mid-infrared concentration-modulated noise-immune cavity-enhanced optical heterodyne molecular spectroscopy of a continuous supersonic expansion discharge source

Talicska, C. N., Porambo, M. W., Perry, A. J. & McCall, B. J., Jun 1 2016, In : Review of Scientific Instruments. 87, 6, 063111.

Research output: Contribution to journalReview article

Molecular spectroscopy
molecular spectroscopy
Infrared radiation
cavities
expansion

Mitigating health risks associated with alcoholic beverages through metabolic engineering

Jayakody, L. N., Lane, S., Kim, H. & Jin, Y-S., Feb 1 2016, In : Current Opinion in Biotechnology. 37, p. 173-181 9 p.

Research output: Contribution to journalReview article

Metabolic engineering
Metabolic Engineering
Alcoholic Beverages
Health risks
Yeast

Modeling neurological disease processes using process algebra

Anastasio, T. J., Feb 1 2016, In : Drug Discovery Today: Disease Models. 19, p. 43-49 7 p.

Research output: Contribution to journalReview article

Drug Combinations
Neurosciences
Nervous System Diseases
Pharmaceutical Preparations
Computer Simulation

Modelling of bone fracture and strength at different length scales: A review

Sabet, F. A., Najafi, A. R., Hamed, E. & Jasiuk, I., Feb 6 2016, In : Interface Focus. 6, 1, 20150055.

Research output: Contribution to journalReview article

Bone Fractures
Bone
Bone and Bones
Bone Diseases
Osteoporosis

NanoEHS - Defining fundamental science needs: No easy feat when the simple itself is complex

Grassian, V. H., Haes, A. J., Mudunkotuwa, I. A., Demokritou, P., Kane, A. B., Murphy, C. J., Hutchison, J. E., Isaacs, J. A., Jun, Y. S., Karn, B., Khondaker, S. I., Larsen, S. C., Lau, B. L. T., Pettibone, J. M., Sadik, O. A., Saleh, N. B. & Teague, C., Feb 1 2016, In : Environmental Science: Nano. 3, 1, p. 15-27 13 p.

Research output: Contribution to journalReview article

nanotechnology
Nanostructured materials
Nanotechnology
catalysis
information technology

Naturally derived biomaterials for addressing inflammation in tissue regeneration

Hortensius, R. A. & Harley, B. A. C., Jan 1 2016, In : Experimental Biology and Medicine. 241, 10, p. 1015-1024 10 p.

Research output: Contribution to journalReview article

Tissue regeneration
Biocompatible Materials
Regeneration
Inflammation
Extracellular Matrix

Neutrino physics with JUNO

An, F., An, G., An, Q., Antonelli, V., Baussan, E., Beacom, J., Bezrukov, L., Blyth, S., Brugnera, R., Avanzini, M. B., Busto, J., Cabrera, A., Cai, H., Cai, X., Cammi, A., Cao, G., Cao, J., Chang, Y., Chen, S., Chen, S. & 207 others, Chen, Y., Chiesa, D., Clemenza, M., Clerbaux, B., Conrad, J., D'Angelo, D., De Kerret, H., Deng, Z., Deng, Z., Ding, Y., Djurcic, Z., Dornic, D., Dracos, M., Drapier, O., Dusini, S., Dye, S., Enqvist, T., Fan, D., Fang, J., Favart, L., Ford, R., Göger-Neff, M., Gan, H., Garfagnini, A., Giammarchi, M., Gonchar, M., Gong, G., Gong, H., Gonin, M., Grassi, M., Grewing, C., Guan, M., Guarino, V., Guo, G., Guo, W., Guo, X. H., Hagner, C., Han, R., He, M., Heng, Y., Hsiung, Y., Hu, J., Hu, S., Hu, T., Huang, H., Huang, X., Huo, L., Ioannisian, A., Jeitler, M., Ji, X., Jiang, X., Jollet, C., Kang, L., Karagounis, M., Kazarian, N., Krumshteyn, Z., Kruth, A., Kuusiniemi, P., Lachenmaier, T., Leitner, R., Li, C., Li, J., Li, W., Li, W., Li, X., Li, X., Li, Y., Li, Y., Li, Z. B., Liang, H., Lin, G. L., Lin, T., Lin, Y. H., Ling, J., Lippi, I., Liu, D., Liu, H., Liu, H., Liu, J., Liu, J., Liu, J., Liu, Q., Liu, S., Liu, S., Lombardi, P., Long, Y., Lu, H., Lu, J., Lu, J., Lu, J., Lubsandorzhiev, B., Ludhova, L., Luo, S., Lyashuk, V., Möllenberg, R., Ma, X., Mantovani, F., Mao, Y., Mari, S. M., McDonough, W. F., Meng, G., Meregaglia, A., Meroni, E., Mezzetto, M., Miramonti, L., Mueller, T., Naumov, D., Oberauer, L., Ochoa-Ricoux, J. P., Olshevskiy, A., Ortica, F., Paoloni, A., Peng, H., Peng, J. C., Previtali, E., Qi, M., Qian, S., Qian, X., Qian, Y., Qin, Z., Raffelt, G., Ranucci, G., Ricci, B., Robens, M., Romani, A., Ruan, X., Ruan, X., Salamanna, G., Shaevitz, M., Sinev, V., Sirignano, C., Sisti, M., Smirnov, O., Soiron, M., Stahl, A., Stanco, L., Steinmann, J., Sun, X., Sun, Y., Taichenachev, D., Tang, J., Tkachev, I., Trzaska, W., Van Waasen, S., Volpe, C., Vorobel, V., Votano, L., Wang, C. H., Wang, G., Wang, H., Wang, M., Wang, R., Wang, S., Wang, W., Wang, Y., Wang, Y., Wang, Z., Wang, Z., Wang, Z., Wang, Z., Wei, W., Wen, L., Wiebusch, C., Wonsak, B., Wu, Q., Wulz, C. E., Wurm, M., Xi, Y., Xia, D., Xie, Y., Xing, Z. Z., Xu, J., Yan, B., Yang, C., Yang, C., Yang, G., Yang, L., Yang, Y., Yao, Y., Yegin, U., Yermia, F., You, Z., Yu, B., Yu, C., Yu, Z., Zavatarelli, S., Zhan, L., Zhang, C., Zhang, H. H., Zhang, J., Zhang, J., Zhang, Q., Zhang, Y. M., Zhang, Z., Zhao, Z., Zheng, Y., Zhong, W., Zhou, G., Zhou, J., Zhou, L., Zhou, R., Zhou, S., Zhou, W., Zhou, X., Zhou, Y., Zhou, Y. & Zou, J., Feb 10 2016, In : Journal of Physics G: Nuclear and Particle Physics. 43, 3, 030401.

Research output: Contribution to journalReview article

observatories
neutrinos
physics
antineutrinos
hierarchies

Nutritional cognitive neuroscience: Innovations for healthy brain aging

Zamroziewicz, M. K. & Barbey, A. K., Jun 6 2016, In : Frontiers in Neuroscience. 10, JUN, 240.

Research output: Contribution to journalReview article

Brain
Food
Health
Epidemiology
Biomarkers

On Priming Action: Conclusions from a Meta-Analysis of the Behavioral Effects of Incidentally-Presented Words

Weingarten, E., Chen, Q., McAdams, M., Yi, J., Hepler, J. & Albarracin, D., Dec 1 2016, In : Current Opinion in Psychology. 12, p. 53-57 5 p.

Research output: Contribution to journalReview article

Meta-Analysis
Publications

Particulate matter emission characteristics of diesel engines with biodiesel or biodiesel blending: A review

Wang, Y., Liu, H. & Lee, C. F. F., Oct 1 2016, In : Renewable and Sustainable Energy Reviews. 64, p. 569-581 13 p.

Research output: Contribution to journalReview article

Biodiesel
Diesel engines
Alternative fuels
Polycyclic aromatic hydrocarbons
Diesel fuels

Performance of b-jet identification in the ATLAS experiment

Atlas Collaboration, Apr 4 2016, In : Journal of Instrumentation. 11, 4, P04008.

Research output: Contribution to journalReview article

Tagging
marking
Experiment
Hadrons
Experiments

Plants in silico: Why, why now and what?-an integrative platform for plant systems biology research

Zhu, X. G., Lynch, J. P., Lebauer, D. S., Millar, A. J., Stitt, M. & Long, S. P., May 1 2016, In : Plant Cell and Environment. 39, 5, p. 1049-1057 9 p.

Research output: Contribution to journalReview article

Systems Biology
Computer Simulation
Biological Sciences
Research
Ecosystem

Polymers with autonomous life-cycle control

Patrick, J. F., Robb, M. J., Sottos, N. R., Moore, J. S. & White, S. R., Dec 14 2016, In : Nature. 540, 7633, p. 363-370 8 p.

Research output: Contribution to journalReview article

Life Cycle Stages
Tears
Polymers
Safety

Polymorphism as an emerging design strategy for high performance organic electronics

Chung, H. & Diao, Y., Jan 1 2016, In : Journal of Materials Chemistry C. 4, 18, p. 3915-3933 19 p.

Research output: Contribution to journalReview article

Polymorphism
Electronic equipment
Charge transfer
Organic field effect transistors
Molecules

Promise of combined hydrothermal/chemical and mechanical refining for pretreatment of woody and herbaceous biomass

Kim, S. M., Dien, B. S. & Singh, V., Apr 30 2016, In : Biotechnology for Biofuels. 9, 1, 97.

Research output: Contribution to journalReview article

Biomass
Refining
Enzymes
Sugars
enzyme

Quantitative imaging of cell membrane-associated effective mass density using Photonic Crystal Enhanced Microscopy (PCEM)

Zhuo, Y., Choi, J. S., Marin, T., Yu, H., Harley, B. A. & Cunningham, B. T., Nov 1 2016, In : Progress in Quantum Electronics. 50, p. 1-18 18 p.

Research output: Contribution to journalReview article

Cell membranes
Photonic crystals
Microscopic examination
photonics
microscopy

Quantum dot surface engineering: Toward inert fluorophores with compact size and bright, stable emission

Lim, S. J., Ma, L., Schleife, A. & Smith, A. M., Aug 1 2016, In : Coordination Chemistry Reviews. 320-321, p. 216-237 22 p.

Research output: Contribution to journalReview article

Fluorophores
Semiconductor quantum dots
quantum dots
engineering
Ligands

Radiation-induced solute segregation in metallic alloys

Ardell, A. J. & Bellon, P., Jun 1 2016, In : Current Opinion in Solid State and Materials Science. 20, 3, p. 115-139 25 p.

Research output: Contribution to journalReview article

Radiation
Point defects
Atoms
Austenitic steel
Ferritic steel

Recent advances in biological production of sugar alcohols

Park, Y. C., Oh, E. J., Jo, J. H., Jin, Y. S. & Seo, J. H., Feb 1 2016, In : Current Opinion in Biotechnology. 37, p. 105-113 9 p.

Research output: Contribution to journalReview article

Sugar Alcohols
Erythritol
Catabolite Repression
Metabolic engineering
Metabolic Engineering

Recent advances in modeling fatigue cracks at microscale in the presence of high density coherent twin interfaces

Chowdhury, P., Sehitoglu, H. & Rateick, R., Jun 1 2016, In : Current Opinion in Solid State and Materials Science. 20, 3, p. 140-150 11 p.

Research output: Contribution to journalReview article

Burgers vector
Damage tolerance
Fatigue crack propagation
Nanostructured materials
Cracks

Recent developments of liposomes as nanocarriers for theranostic applications

Xing, H., Hwang, K. & Lu, Y., Jan 1 2016, In : Theranostics. 6, 9, p. 1336-1352 17 p.

Research output: Contribution to journalReview article

Liposomes
Lipid Bilayers
Therapeutics
Genetic Therapy
Immunotherapy

Recent Progress in Cancer Thermal Therapy Using Gold Nanoparticles

Abadeer, N. S. & Murphy, C. J., Mar 10 2016, In : Journal of Physical Chemistry C. 120, 9, p. 4691-4716 26 p.

Research output: Contribution to journalReview article

Gold
therapy
cancer
gold
Nanoparticles

Recent progress in flexible and stretchable piezoelectric devices for mechanical energy harvesting, sensing and actuation

Dagdeviren, C., Joe, P., Tuzman, O. L., Park, K. I., Lee, K. J., Shi, Y., Huang, Y. & Rogers, J. A., Dec 1 2016, In : Extreme Mechanics Letters. 9, p. 269-281 13 p.

Research output: Contribution to journalReview article

Piezoelectric devices
Energy harvesting
Organic polymers
Mechanical engineering
Materials science

Recommendations for real-time speech MRI

Lingala, S. G., Sutton, B. P., Miquel, M. E. & Nayak, K. S., Jan 1 2016, In : Journal of Magnetic Resonance Imaging. 43, 1, p. 28-44 17 p.

Research output: Contribution to journalReview article

Magnetic Resonance Imaging
Consensus
Los Angeles
Artifacts
Software

Review of formation flying and constellation missions using nanosatellites

Chung, S. J., Bandyopadhyay, S., Foust, R., Subramanian, G. P. & Hadaegh, F. Y., Jan 1 2016, In : Journal of Spacecraft and Rockets. 53, 3, p. 567-578 12 p.

Research output: Contribution to journalReview article

Nanosatellites
nanosatellites
formation flying
constellations
NASA

Review of particle physics

Particle Data Group, Oct 2016, In : Chinese Physics C. 40, 10, 100001.

Research output: Contribution to journalReview article

High energy physics
Bosons
physics
Cosmology
Higgs bosons

Review of particle physics

Patrignani, C., Agashe, K., Aielli, G., Amsler, C., Antonelli, M., Asner, D. M., Baer, H., Banerjee, S., Barnett, R. M., Basaglia, T., Bauer, C. W., Beatty, J. J., Belousov, V. I., Beringer, J., Bethke, S., Bichsel, H., Biebel, O., Blucher, E., Brooijmans, G., Buchmueller, O. & 31 others, Burkert, V., Bychkov, M. A., Cahn, R. N., Carena, M., Ceccucci, A., Cerri, A., Chakraborty, D., Chen, M. C., Chivukula, R. S., Copic, K., Cowan, G., Dahl, O., D'Ambrosio, G., Damour, T., De Florian, D., De Gouvêa, A., DeGrand, T., De Jong, P., Dissertori, G., Dobrescu, B. A., D'Onofrio, M., Doser, M., Drees, M., Dreiner, H. K., Dwyer, D. A., Eerola, P., Eidelman, S., Ellis, J., Erler, J., Fields, B. D. & Particle Data Group, Oct 1 2016, In : Chinese Physics C. 40, 10, 100001.

Research output: Contribution to journalReview article

High energy physics
Bosons
physics
Cosmology
Higgs bosons
envelopes
Ultrasonics
Statistics
statistics
Imaging techniques

Review of recent developments in advanced ejector technology

Elbel, S. & Lawrence, N., Feb 1 2016, In : International Journal of Refrigeration. 62, p. 1-18 18 p.

Research output: Contribution to journalReview article

Recovery
Computational fluid dynamics
Vapors
Geometry
Surface chemistry
Perovskite
Oxides
Oxygen
Electrodes

Self-organization of nucleic acids in lipid constructs

Kang, M., Kim, H. & Leal, C., Dec 1 2016, In : Current Opinion in Colloid and Interface Science. 26, p. 58-65 8 p.

Research output: Contribution to journalReview article

Nucleic acids
nucleic acids
genes
Nucleic Acids
Lipids

SIMS for analysis of nanostructures

Seebauer, E. G. & Barlaz, D. E., May 1 2016, In : Current Opinion in Chemical Engineering. 12, p. 8-13 6 p.

Research output: Contribution to journalReview article

Secondary ion mass spectrometry
Nanostructures
Polycrystalline materials
Nanoelectronics
Nanoparticles

Single-cell analysis at the threshold

Chen, X., Love, J. C., Navin, N. E., Pachter, L., Stubbington, M. J. T., Svensson, V., Sweedler, J. V. & Teichmann, S. A., Nov 8 2016, In : Nature Biotechnology. 34, 11, p. 1111-1118 8 p.

Research output: Contribution to journalReview article

Microfluidics
Metabolomics

Single polymer dynamics of topologically complex DNA

Mai, D. J. & Schroeder, C. M., Dec 1 2016, In : Current Opinion in Colloid and Interface Science. 26, p. 28-40 13 p.

Research output: Contribution to journalReview article

Polymers
DNA
deoxyribonucleic acid
polymers
Molecules

Solving inverse scattering problems in biological samples by quantitative phase imaging

Kim, T., Zhou, R., Goddard, L. L. & Popescu, G., Jan 1 2016, In : Laser and Photonics Reviews. 10, 1, p. 13-39 27 p.

Research output: Contribution to journalReview article

inverse scattering
tomography
Scattering
Imaging techniques
Tomography

Sparingly Solvating Electrolytes for High Energy Density Lithium-Sulfur Batteries

Cheng, L., Curtiss, L. A., Zavadil, K. R., Gewirth, A. A., Shao, Y. & Gallagher, K. G., Sep 9 2016, In : ACS Energy Letters. 1, 3, p. 503-509 7 p.

Research output: Contribution to journalReview article

Electrolytes
Lithium
Sulfur
Polysulfides
Electrochemistry