Research Output 1965 2020

Filter
Review article
2015

Redesigning photosynthesis to sustainably meet global food and bioenergy demand

Ort, D. R., Merchant, S. S., Alric, J., Barkan, A., Blankenship, R. E., Bock, R., Croce, R., Hanson, M. R., Hibberd, J. M., Long, S. P., Moore, T. A., Moroney, J., Niyogi, K. K., Parry, M. A. J., Peralta-Yahya, P. P., Prince, R. C., Redding, K. E., Spalding, M. H., Van Wijk, K. J., Vermaas, W. F. J. & 5 others, Von Caemmerer, S., Weber, A. P. M., Yeates, T. O., Yuan, J. S. & Zhu, X. G., Jul 14 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 28, p. 8529-8536 8 p.

Research output: Contribution to journalReview article

Photosynthesis
Synthetic Biology
Food
Biofuels
Population Growth

Regulatory RNA-assisted genome engineering in microorganisms

Si, T., HamediRad, M. & Zhao, H., Dec 1 2015, In : Current Opinion in Biotechnology. 36, p. 85-90 6 p.

Research output: Contribution to journalReview article

RNA
Microorganisms
Genes
Genome
Microbial Genome

Review of mid-infrared plasmonic materials

Zhong, Y., Malagari, S. D., Hamilton, T. & Wasserman, D. M., Jan 1 2015, In : Journal of Nanophotonics. 9, 1, 093791.

Research output: Contribution to journalReview article

Infrared radiation
Wavelength
wavelengths
metal nitrides
silicides

Secondary ion mass spectrometry and Raman spectroscopy for tissue engineering applications

Ilin, Y. & Kraft, M. L., Feb 1 2015, In : Current Opinion in Biotechnology. 31, p. 108-116 9 p.

Research output: Contribution to journalReview article

Secondary Ion Mass Spectrometry
Raman Spectrum Analysis
Tissue Engineering
Secondary ion mass spectrometry
Tissue engineering

Soft materials in neuroengineering for hard problems in neuroscience

Jeong, J. W., Shin, G., Park, S. I., Yu, K. J., Xu, L. & Rogers, J. A., Apr 8 2015, In : Neuron. 86, 1, p. 175-186 12 p.

Research output: Contribution to journalReview article

Neurosciences
Electrodes
Technology
Research

Software engineering for internet computing: Internetware and beyond

Bertolino, A., Blake, M. B., Mehra, P., Mei, H. & Xie, T., Jan 1 2015, In : IEEE Software. 32, 1, p. 35-37 3 p., 7030224.

Research output: Contribution to journalReview article

Software engineering
Internet
Audio recordings
Quality assurance
Computer systems

Summary and evaluation on single-phase heat transfer enhancement techniques of liquid laminar and turbulent pipe flow

Ji, W. T., Jacobi, A. M., He, Y. L. & Tao, W. Q., Sep 1 2015, In : International Journal of Heat and Mass Transfer. 88, p. 735-754 20 p.

Research output: Contribution to journalReview article

pipe flow
Pipe flow
Tapes
Die casting inserts
heat transfer

Synthetic biology for therapeutic applications

Abil, Z., Xiong, X. & Zhao, H., Feb 2 2015, In : Molecular Pharmaceutics. 12, 2, p. 322-331 10 p.

Research output: Contribution to journalReview article

Synthetic Biology
Bacterial Drug Resistance
Drug Discovery
Communicable Diseases
Neoplasms

The dynamics of electricity grid operation with increasing renewables and the path toward maximum renewable deployment

Li, X., Paster, M. & Stubbins, J. F., Aug 1 2015, In : Renewable and Sustainable Energy Reviews. 47, p. 1007-1015 9 p.

Research output: Contribution to journalReview article

Electricity

The energetic basis of behavior: Bridging behavioral ecology and neuroscience

Rittschof, C. C., Grozinger, C. M. & Robinson, G. E., Dec 1 2015, In : Current Opinion in Behavioral Sciences. 6, p. 19-27 9 p.

Research output: Contribution to journalReview article

Neurosciences
Ecology
Energy Metabolism
Brain
Honey

The geospace response to variable inputs from the lower atmosphere: a review of the progress made by Task Group 4 of CAWSES-II

Oberheide, J., Shiokawa, K., Gurubaran, S., Ward, W. E., Fujiwara, H., Kosch, M. J., Makela, J. J. & Takahashi, H., Dec 1 2015, In : Progress in Earth and Planetary Science. 2, 1, 2.

Research output: Contribution to journalReview article

ionosphere
atmosphere
magnetosphere
weather
energy

The power and promise of applying genomics to honey bee health

Grozinger, C. M. & Robinson, G. E., Jun 11 2015, In : Current Opinion in Insect Science. 10, p. 124-132 9 p., 114.

Research output: Contribution to journalReview article

honey
bee
honey bees
Apoidea
genomics

Time scale interactions and the coevolution of humans and water

Sivapalan, M. & Blöschl, G., Sep 1 2015, In : Water Resources Research. 51, 9, p. 6988-7022 35 p.

Research output: Contribution to journalReview article

coevolution
timescale
resource depletion
levee
water
Crassulacean acid metabolism
agriculture
Acids
cells
economic sustainability

Transverse Spin Structure of the Nucleon

Grosse Perdekamp, M. & Yuan, F., Oct 19 2015, In : Annual Review of Nuclear and Particle Science. 65, 1, p. 429-456 28 p.

Research output: Contribution to journalReview article

quantum chromodynamics
inelastic scattering
collisions
scattering
energy

Trigger chemistries for better industrial formulations

Wang, H. C., Zhang, Y., Possanza, C. M., Zimmerman, S. C., Cheng, J., Moore, J. S., Harris, K. & Katz, J. S., Apr 1 2015, In : ACS Applied Materials and Interfaces. 7, 12, p. 6369-6382 14 p.

Research output: Contribution to journalReview article

Trigger Points
Encapsulation
Hot Temperature
Technology
Light

Ultra-sensitive colorimetric plasmonic sensing and microfluidics for biofluid diagnostics using nanohole array

Ameen, A., Gartia, M. R., Hsiao, A., Chang, T. W., Xu, Z. & Liu, G. L., 2015, In : Journal of Nanomaterials. 2015, 460895.

Research output: Contribution to journalReview article

Microfluidics
Sensors
Proteins
Signal transduction
Metal nanoparticles

Waterborne Viruses: A Barrier to Safe Drinking Water

Gall, A. M., Mariñas, B. J., Lu, Y. & Shisler, J. L., Jun 1 2015, In : PLoS pathogens. 11, 6, e1004867.

Research output: Contribution to journalReview article

Drinking Water
Disease Outbreaks
Viruses
2016

A brief overview of synthetic biology research programs and roadmap studies in the United States

Si, T. & Zhao, H., Dec 1 2016, In : Synthetic and Systems Biotechnology. 1, 4, p. 258-264 7 p.

Research output: Contribution to journalReview article

Synthetic Biology
Research
Government Agencies
Biological systems

Accelerated genome engineering through multiplexing

Bao, Z., Cobb, R. E. & Zhao, H., Jan 1 2016, In : Wiley Interdisciplinary Reviews: Systems Biology and Medicine. 8, 1, p. 5-21 17 p.

Research output: Contribution to journalReview article

Multiplexing
Genes
Genome
Bioengineering
Biological Science Disciplines

A comprehensive empirical study of data privacy, trust, and consumer autonomy

Kesan, J. P., Hayes, C. M. & Bashir, M. N., Jan 1 2016, In : Indiana Law Journal. 91, 2, p. 267-352 86 p.

Research output: Contribution to journalReview article

privacy
autonomy
privacy law
private sector
data storage

ACS Catalysis and the Scope of Papers Sought in Three Catalysis Subdisciplines: Biocatalysis and Enzymology, Molecular Catalysis for Organic Synthesis, and Heterogeneous Photocatalysis

Chang, S., Fornasiero, P., Gunnoe, T. B., Jones, C. W., Linic, S., Ooi, T., Williams, R. M. & Zhao, H., Jul 1 2016, In : ACS Catalysis. 6, 7, p. 4782-4785 4 p.

Research output: Contribution to journalReview article

Photocatalysis
Catalysis
Biocatalysis

A facility to search for hidden particles at the CERN SPS: The SHiP physics case

Alekhin, S., Altmannshofer, W., Asaka, T., Batell, B., Bezrukov, F., Bondarenko, K., Boyarsky, A., Choi, K. Y., Corral, C., Craig, N., Curtin, D., Davidson, S., De Gouvea, A., Dell'Oro, S., DeNiverville, P., Bhupal Dev, P. S., Dreiner, H., Drewes, M., Eijima, S., Essig, R. & 65 others, Fradette, A., Garbrecht, B., Gavela, B., Giudice, G. F., Goodsell, M. D., Gorbunov, D., Gori, S., Grojean, C., Guffanti, A., Hambye, T., Hansen, S. H., Helo, J. C., Hernandez, P., Ibarra, A., Ivashko, A., Izaguirre, E., Jaeckel, J., Jeong, Y. S., Kahlhoefer, F., Kahn, Y., Katz, A., Kim, C. S., Kovalenko, S., Krnjaic, G., Lyubovitskij, V. E., Marcocci, S., McCullough, M., McKeen, D., Mitselmakher, G., Moch, S. O., Mohapatra, R. N., Morrissey, D. E., Ovchynnikov, M., Paschos, E., Pilaftsis, A., Pospelov, M., Reno, M. H., Ringwald, A., Ritz, A., Roszkowski, L., Rubakov, V., Ruchayskiy, O., Schienbein, I., Schmeier, D., Schmidt-Hoberg, K., Schwaller, P., Senjanovic, G., Seto, O., Shaposhnikov, M., Shchutska, L., Shelton, J. F., Shrock, R., Shuve, B., Spannowsky, M., Spray, A., Staub, F., Stolarski, D., Strassler, M., Tello, V., Tramontano, F., Tripathi, A., Tulin, S., Vissani, F., Winkler, M. W. & Zurek, K. M., Oct 24 2016, In : Reports on Progress in Physics. 79, 12, 124201.

Research output: Contribution to journalReview article

physics
leptons
dark matter
neutrinos
proton beams
Supramolecular chemistry
Molecular recognition
Molecules
Intercalation
DNA

Analytical capabilities of mass spectrometry imaging and its potential applications in food science

Li, B., Dunham, S. J. B., Dong, Y., Yoon, S., Zeng, M. & Sweedler, J. V., Jan 1 2016, In : Trends in Food Science and Technology. 47, p. 50-63 14 p.

Research output: Contribution to journalReview article

Food Technology
food science
Mass Spectrometry
image analysis
mass spectrometry

A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity

Nguyen, N. P., Warnow, T., Pop, M. & White, B., Apr 20 2016, In : npj Biofilms and Microbiomes. 2, 16004.

Research output: Contribution to journalReview article

Cluster Analysis
Sequence Alignment
Microbiota

A review of snapshot multidimensional optical imaging: Measuring photon tags in parallel

Gao, L. & Wang, L. V., Feb 29 2016, In : Physics Reports. 616, p. 1-37 37 p.

Research output: Contribution to journalReview article

acquisition
photons
scanning
photography
image reconstruction

Biochemical and biophysical understanding of metal ion selectivity of DNAzymes

Hwang, K., Hosseinzadeh, P. & Lu, Y., Jan 1 2016, In : Inorganica Chimica Acta. 452, p. 12-24 13 p.

Research output: Contribution to journalReview article

Catalytic DNA
Metal ions
Structural properties
metal ions
selectivity

Bioelectronics with two-dimensional materials

Kang, P., Wang, M. C. & Nam, S., Aug 1 2016, In : Microelectronic Engineering. 161, p. 18-35 18 p.

Research output: Contribution to journalReview article

emerging
graphene
transition metals
optical resonators
biocompatibility

Challenges and Opportunities to Harnessing the (Hematopoietic) Stem Cell Niche

Choi, J. S. & Harley, B. A. C., Mar 1 2016, In : Current Stem Cell Reports. 2, 1, p. 85-94 10 p.

Research output: Contribution to journalReview article

Stem Cell Niche
Hematopoietic Stem Cells
Stem Cells
Extracellular Matrix
Adult Stem Cells

Challenges in Data Crowdsourcing

Garcia-Molina, H., Joglekar, M., Marcus, A., Parameswaran, A. G. & Verroios, V., Apr 1 2016, In : IEEE Transactions on Knowledge and Data Engineering. 28, 4, p. 901-911 11 p., 7384520.

Research output: Contribution to journalReview article

Data acquisition
Crowdsourcing
Desalination
Intercalation
intercalation
Ions
membranes

Considerations of Environmentally Relevant Test Conditions for Improved Evaluation of Ecological Hazards of Engineered Nanomaterials

Holden, P. A., Gardea-Torresdey, J. L., Klaessig, F., Turco, R. F., Mortimer, M., Hund-Rinke, K., Cohen Hubal, E. A., Avery, D., Barceló, D., Behra, R., Cohen, Y., Deydier-Stephan, L., Ferguson, P. L., Fernandes, T. F., Herr Harthorn, B., Henderson, W. M., Hoke, R. A., Hristozov, D., Johnston, J. M., Kane, A. B. & 20 others, Kapustka, L., Keller, A. A., Lenihan, H. S., Lovell, W., Murphy, C. J., Nisbet, R. M., Petersen, E. J., Salinas, E. R., Scheringer, M., Sharma, M., Speed, D. E., Sultan, Y., Westerhoff, P., White, J. C., Wiesner, M. R., Wong, E. M., Xing, B., Steele Horan, M., Godwin, H. A. & Nel, A. E., Jun 21 2016, In : Environmental Science and Technology. 50, 12, p. 6124-6145 22 p.

Research output: Contribution to journalReview article

Nanostructured materials
Hazards
hazard
ecotoxicology
hazard assessment

Contact-facilitated drug delivery with Sn2 lipase labile prodrugs optimize targeted lipid nanoparticle drug delivery

Pan, D., Pham, C. T. N., Weilbaecher, K. N., Tomasson, M. H., Wickline, S. A. & Lanza, G. M., Jan 1 2016, In : Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology. 8, 1, p. 85-106 22 p.

Research output: Contribution to journalReview article

Medical nanotechnology
Phospholipids
Prodrugs
Lipases
Lipase

COSMOLOGICAL CONSTRAINTS from GALAXY CLUSTERS in the 2500 SQUARE-DEGREE SPT-SZ SURVEY

Haan, T. D., Benson, B. A., Bleem, L. E., Allen, S. W., Applegate, D. E., Ashby, M. L. N., Bautz, M., Bayliss, M., Bocquet, S., Brodwin, M., Carlstrom, J. E., Chang, C. L., Chiu, I., Cho, H. M., Clocchiatti, A., Crawford, T. M., Crites, A. T., Desai, S., Dietrich, J. P., Dobbs, M. A. & 57 others, Doucouliagos, A. N., Foley, R. J., Forman, W. R., Garmire, G. P., George, E. M., Gladders, M. D., Gonzalez, A. H., Gupta, N., Halverson, N. W., Hlavacek-Larrondo, J., Hoekstra, H., Holder, G. P., Holzapfel, W. L., Hou, Z., Hrubes, J. D., Huang, N., Jones, C., Keisler, R., Knox, L., Lee, A. T., Leitch, E. M., Linden, A. V. D., Luong-Van, D., Mantz, A., Marrone, D. P., McDonald, M., McMahon, J. J., Meyer, S. S., Mocanu, L. M., Mohr, J. J., Murray, S. S., Padin, S., Pryke, C., Rapetti, D., Reichardt, C. L., Rest, A., Ruel, J., Ruhl, J. E., Saliwanchik, B. R., Saro, A., Sayre, J. T., Schaffer, K. K., Schrabback, T., Shirokoff, E., Song, J., Spieler, H. G., Stalder, B., Stanford, S. A., Staniszewski, Z., Stark, A. A., Story, K. T., Stubbs, C. W., Vanderlinde, K., Vieira, J. D., Vikhlinin, A., Williamson, R. & Zenteno, A., Nov 20 2016, In : Astrophysical Journal. 832, 1, 95.

Research output: Contribution to journalReview article

poles
telescopes
cosmology
equation of state
acoustics

Design and engineering of artificial oxygen-activating metalloenzymes

Nastri, F., Chino, M., Maglio, O., Bhagi-Damodaran, A., Lu, Y. & Lombardi, A., Sep 21 2016, In : Chemical Society Reviews. 45, 18, p. 5020-5054 35 p.

Research output: Contribution to journalReview article

Oxygen
Enzymes
Metals
Proteins

Design and performance of well-performing railway transitions

Stark, T. D., Wilk, S. T. & Rose, J. G., Jan 1 2016, In : Transportation Research Record. 2545, p. 20-26 7 p.

Research output: Contribution to journalReview article

Dynamic loads
Railroad tracks
Bridge decks
Accelerometers
Stiffness

Droplet-based biosensing for lab-on-a-chip, open microfluidics platforms

Dak, P., Ebrahimi, A., Swaminathan, V., Duarte-Guevara, C., Bashir, R. & Alam, M. A., Jan 1 2016, In : Biosensors. 6, 2, 14.

Research output: Contribution to journalReview article

Lab-on-a-chip
Microfluidics
Biosensing Techniques
Biosensors
Costs and Cost Analysis

Electrical Chips for Biological Point-of-Care Detection

Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Biochips
Lab-on-a-chip
Multiplexing
Health care

Emerging Biosensing Approaches for microRNA Analysis

Graybill, R. M. & Bailey, R. C., Jan 5 2016, In : Analytical chemistry. 88, 1, p. 431-450 20 p.

Research output: Contribution to journalReview article

MicroRNAs

Emerging trends and opportunities in discrete-frequency infrared and Raman spectroscopic imaging

Wrobel, T. P., Kole, M. R. & Bhargava, R., Jun 2016, In : Spectroscopy (Santa Monica). 31, 6

Research output: Contribution to journalReview article

emerging
Microscopic examination
microscopy
Infrared radiation
trends

Engineering microbial hosts for production of bacterial natural products

Zhang, M. M., Wang, Y., Ang, E. L. & Zhao, H., Aug 2016, In : Natural Product Reports. 33, 8, p. 963-987 25 p.

Research output: Contribution to journalReview article

Biological Products
Genetic Engineering
Actinobacteria
Genomics
Genetic engineering

Engineering Synthetic Gene Circuits in Living Cells with CRISPR Technology

Jusiak, B., Cleto, S., Perez-Piñera, P. & Lu, T. K., Jul 1 2016, In : Trends in Biotechnology. 34, 7, p. 535-547 13 p.

Research output: Contribution to journalReview article

Clustered Regularly Interspaced Short Palindromic Repeats
Synthetic Genes
Gene Regulatory Networks
Genes
Cells

Enhancing reproducibility for computational methods

Stodden, V., McNutt, M., Bailey, D. H., Deelman, E., Gil, Y., Hanson, B., Heroux, M. A., Ioannidis, J. P. A. & Taufer, M., Dec 9 2016, In : Science. 354, 6317, p. 1240-1241 2 p.

Research output: Contribution to journalReview article

Exercise and gut immune function: Evidence of alterations in colon immune cell homeostasis and microbiome characteristics with exercise training

Cook, M. D., Allen, J. M., Pence, B. D., Wallig, M. A., Gaskins, H. R., White, B. A. & Woods, J. A., Feb 1 2016, In : Immunology and Cell Biology. 94, 2, p. 158-163 6 p.

Research output: Contribution to journalReview article

Microbiota
Colon
Homeostasis
Dysbiosis
Exercise

Fluorescent nanoprobes for sensing and imaging of metal ions: Recent advances and future perspectives

Zhang, J. J., Cheng, F. F., Li, J. J., Zhu, J. J. & Lu, Y., Jun 1 2016, In : Nano Today. 11, 3, p. 309-329 21 p.

Research output: Contribution to journalReview article

Nanoprobes
Nanostructures
Nanostructured materials
Metal ions
Quantum Dots

Genome engineering using Adeno-associated virus: Basic and clinical research applications

Gaj, T., Epstein, B. E. & Schaffer, D. V., Mar 1 2016, In : Molecular Therapy. 24, 3, p. 458-464 7 p.

Research output: Contribution to journalReview article

Dependovirus
Genome
Research
Gene Targeting
Homologous Recombination

High-confidence software evolution

Gao, Q., Li, J., Xiong, Y., Hao, D., Xiao, X., Taneja, K., Zhang, L. & Xie, T., Jul 1 2016, In : Science China Information Sciences. 59, 7, 071101.

Research output: Contribution to journalReview article

Application programming interfaces (API)
Data storage equipment

High-resolution, hybrid optical trapping methods, and their application to nucleic acid processing proteins

Chemla, Y. R., Oct 1 2016, In : Biopolymers. p. 704-714 11 p.

Research output: Contribution to journalReview article

Optical Tweezers
Nucleic acids
Nucleic Acids
Proteins
Processing

Image science at JOSA A: Editorial

Carney, P. S., Oct 2016, In : Journal of the Optical Society of America A: Optics and Image Science, and Vision. 33, 10, p. ED8

Research output: Contribution to journalReview article